BLASTX nr result

ID: Coptis25_contig00007834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007834
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307777.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-15
ref|XP_002284837.1| PREDICTED: uncharacterized protein LOC100245...    57   2e-14
emb|CBI18873.3| unnamed protein product [Vitis vinifera]               57   2e-14
ref|XP_002510653.1| conserved hypothetical protein [Ricinus comm...    58   4e-14
ref|XP_004145596.1| PREDICTED: uncharacterized protein LOC101216...    58   1e-12

>ref|XP_002307777.1| predicted protein [Populus trichocarpa] gi|222857226|gb|EEE94773.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 60.5 bits (145), Expect(2) = 4e-15
 Identities = 26/56 (46%), Positives = 43/56 (76%)
 Frame = -2

Query: 438 LQLPKTQESLHRRSDFMEKLLEEFLQFIDVFGIFRATLVELKEELSSVQLVSAKKE 271
           LQLP+TQESL R+  + EK+LE+FL+F+DV+GIF+  ++ +K++  + Q+   KK+
Sbjct: 86  LQLPQTQESLRRQPTWAEKILEDFLRFVDVYGIFQTLVLSVKDDQRAAQVAIRKKD 141



 Score = 45.8 bits (107), Expect(2) = 4e-15
 Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
 Frame = -3

Query: 557 SQLNDEINDLKSWIS--EERNSSWICESLIRLKNLHDSFNDL 438
           SQL +EI++LK+W S  E R S+W+C+ L RLK++ D  +D+
Sbjct: 44  SQLQNEIDELKTWSSKLENRTSAWLCDGLSRLKDVQDCLDDI 85


>ref|XP_002284837.1| PREDICTED: uncharacterized protein LOC100245335 [Vitis vinifera]
          Length = 292

 Score = 56.6 bits (135), Expect(2) = 2e-14
 Identities = 26/56 (46%), Positives = 42/56 (75%)
 Frame = -2

Query: 438 LQLPKTQESLHRRSDFMEKLLEEFLQFIDVFGIFRATLVELKEELSSVQLVSAKKE 271
           LQLP+TQE L R+   +EKLLE+FL F+D++G F+ +++ LKEE S+ Q+   +++
Sbjct: 85  LQLPQTQELLRRQPAAVEKLLEDFLGFVDLYGRFQTSVLALKEEQSAAQVAIRRRD 140



 Score = 47.4 bits (111), Expect(2) = 2e-14
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = -3

Query: 557 SQLNDEINDLKSWISE--ERNSSWICESLIRLKNLHDSFNDLFNFQKLKNL 411
           SQL +EI +L++W S+  ER S+W+CE L RL+ +H S +D+    + + L
Sbjct: 43  SQLKEEIKELRAWESKLGERTSAWLCEGLSRLRTVHYSLDDILQLPQTQEL 93


>emb|CBI18873.3| unnamed protein product [Vitis vinifera]
          Length = 223

 Score = 56.6 bits (135), Expect(2) = 2e-14
 Identities = 26/56 (46%), Positives = 42/56 (75%)
 Frame = -2

Query: 438 LQLPKTQESLHRRSDFMEKLLEEFLQFIDVFGIFRATLVELKEELSSVQLVSAKKE 271
           LQLP+TQE L R+   +EKLLE+FL F+D++G F+ +++ LKEE S+ Q+   +++
Sbjct: 85  LQLPQTQELLRRQPAAVEKLLEDFLGFVDLYGRFQTSVLALKEEQSAAQVAIRRRD 140



 Score = 47.4 bits (111), Expect(2) = 2e-14
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
 Frame = -3

Query: 557 SQLNDEINDLKSWISE--ERNSSWICESLIRLKNLHDSFNDLFNFQKLKNL 411
           SQL +EI +L++W S+  ER S+W+CE L RL+ +H S +D+    + + L
Sbjct: 43  SQLKEEIKELRAWESKLGERTSAWLCEGLSRLRTVHYSLDDILQLPQTQEL 93


>ref|XP_002510653.1| conserved hypothetical protein [Ricinus communis]
           gi|223551354|gb|EEF52840.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 300

 Score = 57.8 bits (138), Expect(2) = 4e-14
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = -2

Query: 438 LQLPKTQESLHRRSDFMEKLLEEFLQFIDVFGIFRATLVELKEELSSVQLVSAKKE 271
           L LP+TQESL R   ++EKLL++FL+F+DV+G F+ + + LKE+  + Q+   K++
Sbjct: 84  LHLPQTQESLRRHPKWIEKLLDDFLRFVDVYGTFQTSFLSLKEDQLAAQVAVRKRD 139



 Score = 45.1 bits (105), Expect(2) = 4e-14
 Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
 Frame = -3

Query: 554 QLNDEINDLKSWIS--EERNSSWICESLIRLKNLHDSFNDLFN 432
           QL D I+ LK W S  + R SSW+C+ L  LK LHDS +D+ +
Sbjct: 43  QLKDAIHKLKVWSSKSDNRTSSWLCDGLTSLKALHDSLDDILH 85


>ref|XP_004145596.1| PREDICTED: uncharacterized protein LOC101216667 [Cucumis sativus]
           gi|449485277|ref|XP_004157121.1| PREDICTED:
           uncharacterized protein LOC101226133 [Cucumis sativus]
          Length = 304

 Score = 57.8 bits (138), Expect(2) = 1e-12
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = -2

Query: 438 LQLPKTQESLHRRSDFMEKLLEEFLQFIDVFGIFRATLVELKEELSSVQLVSAKKE 271
           L LP+T++SL     +++KLLE FL+F+DV+GIF+  ++ LKEE S+ Q+   +K+
Sbjct: 81  LNLPQTRDSLRHHPHWIDKLLEHFLRFVDVYGIFQTLILSLKEEHSAAQVAMRRKD 136



 Score = 40.4 bits (93), Expect(2) = 1e-12
 Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = -3

Query: 554 QLNDEINDLKSWI--SEERNSSWICESLIRLKNLHDSFNDLFNFQKLKN 414
           QL D+I +L SW   S+   ++WIC+ L  LK +H+  +D+ N  + ++
Sbjct: 40  QLKDQIANLHSWSLNSDSHTAAWICDGLNHLKTVHNHLDDILNLPQTRD 88


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