BLASTX nr result

ID: Coptis25_contig00007826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007826
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   179   3e-43
emb|CBI24211.3| unnamed protein product [Vitis vinifera]              178   8e-43
ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxido...   178   8e-43
ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, ...   176   2e-42
gb|AEK05986.1| heme oxygenase 2 protein 2 [Populus balsamifera]       175   5e-42

>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  179 bits (455), Expect = 3e-43
 Identities = 77/110 (70%), Positives = 97/110 (88%)
 Frame = -3

Query: 607 AWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLF 428
           AWL LMD++  E D S+I  NCEAQH+YLTWR+EKDPGH VLK+L+GE +AKD+++ FLF
Sbjct: 228 AWLGLMDRSEGETDASQIACNCEAQHRYLTWRSEKDPGHGVLKRLIGEDLAKDVITKFLF 287

Query: 427 NGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGD 278
           NG+N LG+K FLDYFPEYRCEDGK+N+KRS+IGKSF++RPW+A GEF+GD
Sbjct: 288 NGVNELGNKTFLDYFPEYRCEDGKVNEKRSMIGKSFENRPWNARGEFIGD 337


>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  178 bits (451), Expect = 8e-43
 Identities = 78/112 (69%), Positives = 97/112 (86%)
 Frame = -3

Query: 607 AWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLF 428
           AWLELM+QA EE+D S+I+ N EAQH+YLTWRAEKDPGH++LKKL+GE ++KD+V +FLF
Sbjct: 267 AWLELMEQAAEERDTSQIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLF 326

Query: 427 NGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 272
           NG++ LG+K FLDYFPEY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 327 NGVDELGTKTFLDYFPEYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 378


>ref|XP_002278992.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Vitis vinifera]
          Length = 330

 Score =  178 bits (451), Expect = 8e-43
 Identities = 78/112 (69%), Positives = 97/112 (86%)
 Frame = -3

Query: 607 AWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLF 428
           AWLELM+QA EE+D S+I+ N EAQH+YLTWRAEKDPGH++LKKL+GE ++KD+V +FLF
Sbjct: 210 AWLELMEQAAEERDTSQIICNREAQHRYLTWRAEKDPGHRILKKLIGESLSKDLVRSFLF 269

Query: 427 NGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDP 272
           NG++ LG+K FLDYFPEY CE+G IN KRS+IGKSF+SRPWD  GEF+G  P
Sbjct: 270 NGVDELGTKTFLDYFPEYCCENGTINDKRSIIGKSFESRPWDTSGEFIGSLP 321


>ref|XP_002516715.1| Phytochromobilin:ferredoxin oxidoreductase, chloroplast precursor,
           putative [Ricinus communis] gi|223544210|gb|EEF45734.1|
           Phytochromobilin:ferredoxin oxidoreductase, chloroplast
           precursor, putative [Ricinus communis]
          Length = 330

 Score =  176 bits (447), Expect = 2e-42
 Identities = 79/110 (71%), Positives = 96/110 (87%)
 Frame = -3

Query: 604 WLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLFN 425
           WL+L++QA EE D S+I+ N EAQHKYLTWRAEKDPGH VLKKL+GE +AKD+V NFLFN
Sbjct: 218 WLQLIEQAVEETDISQIICNREAQHKYLTWRAEKDPGHGVLKKLIGESLAKDLVRNFLFN 277

Query: 424 GINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDD 275
           G++ LGSK FLDYFP+YRC+DG IN+KRSVIGKSF+ RPWD  GEF+G++
Sbjct: 278 GLDELGSKGFLDYFPQYRCKDGNINEKRSVIGKSFEMRPWDINGEFIGNN 327


>gb|AEK05986.1| heme oxygenase 2 protein 2 [Populus balsamifera]
          Length = 326

 Score =  175 bits (444), Expect = 5e-42
 Identities = 79/113 (69%), Positives = 96/113 (84%)
 Frame = -3

Query: 607 AWLELMDQAREEKDDSRILLNCEAQHKYLTWRAEKDPGHQVLKKLVGEIVAKDIVSNFLF 428
           AWLEL+ QA EE D S I  N EAQHKYLTWRAEKDPGH +LK+L+GE  A+D+V +FLF
Sbjct: 213 AWLELIAQAPEEIDASYIKCNREAQHKYLTWRAEKDPGHGILKRLIGERHAQDLVXDFLF 272

Query: 427 NGINTLGSKAFLDYFPEYRCEDGKINQKRSVIGKSFQSRPWDAGGEFVGDDPR 269
           NG++ LGSK FLDYFPEYRCEDG +N+KRS++GKSF++RPWDA GEF+GDD +
Sbjct: 273 NGLDELGSKGFLDYFPEYRCEDGSVNEKRSILGKSFENRPWDARGEFIGDDXK 325


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