BLASTX nr result

ID: Coptis25_contig00007824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007824
         (2073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-...   298   3e-78
ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putat...   288   3e-75
emb|CAN81196.1| hypothetical protein VITISV_022855 [Vitis vinifera]   283   1e-73
emb|CAA11499.1| basic leucine zipper protein [Spinacia oleracea]      281   4e-73
gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus r...   279   2e-72

>ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-like [Vitis vinifera]
            gi|297745388|emb|CBI40468.3| unnamed protein product
            [Vitis vinifera]
          Length = 430

 Score =  298 bits (764), Expect = 3e-78
 Identities = 198/431 (45%), Positives = 240/431 (55%), Gaps = 35/431 (8%)
 Frame = +1

Query: 361  MGNEEGDTNIKPEKASSPAQ-EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPP 537
            MGNEE   + KPEK +SP   + +NIH YP+WAA+QAYYGP V LPP Y+NSA+ SGH P
Sbjct: 1    MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTLPP-YYNSAMASGHAP 59

Query: 538  PHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSF-LVPPPQGLGDSSPSAASEAMVVTP 714
             HPY+WG PQ +MPPYG PYAA+Y PGGVY HP+  L     G G  S    SEA+   P
Sbjct: 60   -HPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHPAVPLGSHSHGHGVQSSPVVSEALAAPP 118

Query: 715  LSMATPAKSSSSKDQGFTKKLKRLNGSTTVIXXXXXXXXXXXXXXDCG----TEGSSGSD 882
            LS+ TPAKSS + D+G  KKLK  +G    I                     TEGSS   
Sbjct: 119  LSIETPAKSSGNTDRGLMKKLKGFDGLAMSIGNGNGESTEGGSDHGLSQSGETEGSSDGS 178

Query: 883  DNSIEGKD-----RKVDGLTAYGGNA--------------NATPSMALGVSPVPASLACK 1005
            D +  G D     R  +G    GG+               NA     LGV+  P S+  K
Sbjct: 179  DGNTAGADQTRRKRSREGTPPIGGDGKTETQATSAPSAEVNAGSDKVLGVAVPPTSVTGK 238

Query: 1006 QVETVPYSNGNARGVSVTPPAVVAEV-PS---QHG--LASGQXXXXXXXXXXXXXXQSNR 1167
                V     +       PP+V A+  PS   Q G  + S                QSNR
Sbjct: 239  LAGAVLSPRMSTALELRNPPSVNAKTSPSSIPQPGAMVPSDTWILNEREIKRERRKQSNR 298

Query: 1168 ESARRSRLRKQAEAEELAVKVDSLNAENLALRSEINQLTENSEKLRLENSSLMEKLKSGQ 1347
            ESARRSRLRKQAE EELA+KV+SLN EN  L+SEIN+L ENSEKL+LEN++LMEKLKS Q
Sbjct: 299  ESARRSRLRKQAETEELALKVESLNTENSVLKSEINRLRENSEKLKLENATLMEKLKSAQ 358

Query: 1348 HEGAGEMVSSNMLPQEGQPVSTENFLSKVENSLSNTTKGIETND----NPNSGSKLRQLL 1515
             E A +   + +  +   PVSTEN LS+V NS S      E  D    N N+G+KL QLL
Sbjct: 359  LEQAEDTHLNKVDDKRVLPVSTENLLSRVNNSGSVDRSTEEEGDMYEKNTNTGAKLHQLL 418

Query: 1516 ESSPRGDAVAA 1548
            ++SPR DAVAA
Sbjct: 419  DTSPRADAVAA 429


>ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putative [Ricinus communis]
            gi|223549135|gb|EEF50624.1| Common plant regulatory
            factor CPRF-1, putative [Ricinus communis]
          Length = 401

 Score =  288 bits (738), Expect = 3e-75
 Identities = 186/421 (44%), Positives = 243/421 (57%), Gaps = 25/421 (5%)
 Frame = +1

Query: 361  MGNEEGDTNIKPEKASSPAQ-EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPP 537
            MGN E   + K +K+SSPA  + +NIH YP+WAA+QAYYGP + LPP Y+NSA+ SGH P
Sbjct: 3    MGNNEEGKSAKRDKSSSPAPPDQANIHVYPDWAAMQAYYGPRMALPP-YYNSAMASGHAP 61

Query: 538  PHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLV---PPPQGLGDSSPSAASEAMVV 708
             HPYMWG PQ +MPPYGTPYAA+Y  GGVYAHP+  +   PP  G+  +SP+A      V
Sbjct: 62   -HPYMWGPPQPMMPPYGTPYAAVYSHGGVYAHPAVPIGSQPPGHGV-PASPAA------V 113

Query: 709  TPLSMATPAKSSSSKDQGFTKKLKRLNGSTTVIXXXXXXXXXXXXXX-----DCGTEGSS 873
            TPL++ TP KS+ + D+G  KKLK  +G    I                      TEGS+
Sbjct: 114  TPLNVETPTKSTGNADRGLIKKLKGFDGLAMSIGNGHSKVESAEGGERRLSQSSETEGST 173

Query: 874  -GSDDNSIEGKDRKVDGLTAYGGN------ANATP-----SMALGVSPVPASLACKQVET 1017
             GSD N+  GK R  +G    GG        N+ P     S+   +SP  ++    +   
Sbjct: 174  NGSDGNTTAGKKRSREGTPTIGGEIRTETRVNSLPTGEAKSVGSVISPSMSTALELRNSP 233

Query: 1018 VPYSNGNARGVSVTPPAVVAEVPSQHGLASGQXXXXXXXXXXXXXXQSNRESARRSRLRK 1197
            V  +  N +   V PP    +   +                     QSNRESARRSRLRK
Sbjct: 234  VSAAKTNVQPCPVLPPETWIQNERE--------------LKRERRKQSNRESARRSRLRK 279

Query: 1198 QAEAEELAVKVDSLNAENLALRSEINQLTENSEKLRLENSSLMEKLKSGQHEGAGEMVSS 1377
            QAE EEL+ KV+SL +ENLAL+SEI+Q++E SEKLRLEN++L+EKLK+ +   + +++ +
Sbjct: 280  QAETEELSHKVESLTSENLALKSEIHQMSEKSEKLRLENAALLEKLKNAELGHSQDIMLN 339

Query: 1378 NMLPQEGQPVSTENFLSKVENSLSNTTKGIETND----NPNSGSKLRQLLESSPRGDAVA 1545
            N     G  VSTEN LS+V+NS S   K  E  D      NSG+KL QLL +SPR DAVA
Sbjct: 340  NSDEPRGSAVSTENLLSRVDNSASVERKTAEDGDIYERTSNSGAKLHQLLSTSPRADAVA 399

Query: 1546 A 1548
            A
Sbjct: 400  A 400


>emb|CAN81196.1| hypothetical protein VITISV_022855 [Vitis vinifera]
          Length = 429

 Score =  283 bits (725), Expect = 1e-73
 Identities = 194/430 (45%), Positives = 237/430 (55%), Gaps = 34/430 (7%)
 Frame = +1

Query: 361  MGNEEGDTNIKPEKASSPAQ-EPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPP 537
            MGNEE   + KPEK +SP   + +NIH YP+WAA+QAYYGP V LPP Y+NSA+ SGH P
Sbjct: 1    MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTLPP-YYNSAMASGHAP 59

Query: 538  PHPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFL---VPPPQGLGDSSPSAASEAMVV 708
             HPY+WG PQ +MPPYG PYAA+Y PGGVY HP+     V     + D +          
Sbjct: 60   -HPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHPAVPLNNVTKNASVMDKAKLCLLAVQAA 118

Query: 709  TPLSMATPAKSSSSKDQGFTKKLKRLNGSTTVIXXXXXXXXXXXXXXDCG----TEGSS- 873
             PLS+ TPAKSS + D+G  KKLK  +G    I                     TEGSS 
Sbjct: 119  PPLSIETPAKSSGNTDRGLMKKLKGFDGLAMSIGNGNGESTEGGSDHGLSQSGETEGSSD 178

Query: 874  GSDDNSI-------------EGKDRKVDGLTAYGGNA--NATPSMALGVSPVPASLACKQ 1008
            GSD N+               G D K +       +A  NA     LGV+  P S+  K 
Sbjct: 179  GSDGNTAGTFIIHVFSITVSTGGDGKTETQATSXPSAEVNAGSDKVLGVAVPPTSVTGKL 238

Query: 1009 VETVPYSNGNARGVSVTPPAVVAEV-PS---QHG--LASGQXXXXXXXXXXXXXXQSNRE 1170
               V     +       PP+V A+  PS   Q G  + S                QSNRE
Sbjct: 239  AGAVLSPRMSTALELRNPPSVNAKTSPSSIPQPGAMVPSDTWILNEREIKRERRKQSNRE 298

Query: 1171 SARRSRLRKQAEAEELAVKVDSLNAENLALRSEINQLTENSEKLRLENSSLMEKLKSGQH 1350
            SARRSRLRKQAE EELA+KV+SLN EN  L+SEIN+L ENSEKL+LEN++LMEKLKS Q 
Sbjct: 299  SARRSRLRKQAETEELALKVESLNTENSVLKSEINRLRENSEKLKLENATLMEKLKSAQL 358

Query: 1351 EGAGEMVSSNMLPQEGQPVSTENFLSKVENSLSNTTKGIETND----NPNSGSKLRQLLE 1518
            E A +   + +  +   PVSTEN LS+V NS S      E  D    N N+G+KL QLL+
Sbjct: 359  EQAEDTHLNKVDDKRVLPVSTENLLSRVNNSGSVDRSTEEEGDMYEKNTNTGAKLHQLLD 418

Query: 1519 SSPRGDAVAA 1548
            +SPR DAVAA
Sbjct: 419  TSPRADAVAA 428


>emb|CAA11499.1| basic leucine zipper protein [Spinacia oleracea]
          Length = 422

 Score =  281 bits (720), Expect = 4e-73
 Identities = 190/425 (44%), Positives = 237/425 (55%), Gaps = 29/425 (6%)
 Frame = +1

Query: 361  MGNEEGDTNIKPEKASSPAQEPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPPP 540
            MG+ +   + K EK S PA E + +H YP+WAA+QAYYGP V LPP YFNSAV  GHPPP
Sbjct: 1    MGSSDDVKSPKSEKTSPPATEHNGVHMYPDWAAMQAYYGPRVALPP-YFNSAVAPGHPPP 59

Query: 541  HPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLVPPPQGLGDSSPSAASEAMVVTPLS 720
             PYMWG PQ ++PPYG PYAA+Y PGGVYAHP+  +       + +P A SE +V TPLS
Sbjct: 60   -PYMWGPPQPMVPPYGAPYAAIYAPGGVYAHPAIPLASQAHGQEVAPPAVSEPLVATPLS 118

Query: 721  MATPAKSSSSKDQGFTKKLKRLNGSTTVI----XXXXXXXXXXXXXXDCGTEGSS-GSDD 885
            M TPAKS  + D+GF KKLK  NG    I                     +EGSS GSD 
Sbjct: 119  MDTPAKSPKNADKGFIKKLKGFNGLAMSIGNGNTEKTEGDVENRLSQSAESEGSSNGSDG 178

Query: 886  NSIEGKD-----RKVDGLTAYGGNANATPSMA---------LGVSPVPASLACKQVETVP 1023
            N  E  D     R  +G T     A  T   A         LG+    A+    QV    
Sbjct: 179  NYTEDADDNKRKRSREG-TPISVEAEKTEIKAVLPPPADKVLGIPVTSANAVAGQVMGTV 237

Query: 1024 YSNGNARGVSVTPPAVVAE-----VPSQHGLASGQ-XXXXXXXXXXXXXXQSNRESARRS 1185
             S G A  + +  P V  +     V S +G+ S +               QSNRESARRS
Sbjct: 238  VSPGVATTLELRNPGVTVKGNSSPVSSPNGVVSSEAWLQTQRELKRERRKQSNRESARRS 297

Query: 1186 RLRKQAEAEELAVKVDSLNAENLALRSEINQLTENSEKLRLENSSLMEKLKSGQHEGAGE 1365
            RLRKQAE EELA +V+SL+AEN+AL+SE+N L ENS+KLRLEN++L  KLK+ Q     E
Sbjct: 298  RLRKQAETEELARRVESLSAENMALKSEVNLLVENSQKLRLENAALTGKLKNLQSGQGDE 357

Query: 1366 MVSSNMLPQEGQPVSTENFLSKVENSLS---NTTKGIET-NDNPNSGSKLRQLLESSPRG 1533
               +N+  +     STEN LS+V NS S   N+ +G E    +  SG+K  QLL++  RG
Sbjct: 358  NGLANVDTKRNPSDSTENLLSRVNNSSSVGRNSDEGAEMFGKSAKSGAKFHQLLDNR-RG 416

Query: 1534 DAVAA 1548
            DAVAA
Sbjct: 417  DAVAA 421


>gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus roseus]
          Length = 426

 Score =  279 bits (714), Expect = 2e-72
 Identities = 189/431 (43%), Positives = 239/431 (55%), Gaps = 35/431 (8%)
 Frame = +1

Query: 361  MGNEEGDTNIKPEKASSPAQEPSNIHAYPNWAAVQAYYGPGVNLPPPYFNSAVTSGHPPP 540
            MG+ E   + KPEK+SSPA E SN+H YP+WAA+QAYYGP V +PP YF+SAV SGHPP 
Sbjct: 1    MGSSEETKSSKPEKSSSPAPEQSNVHVYPDWAAMQAYYGPRVAVPP-YFSSAVASGHPP- 58

Query: 541  HPYMWGTPQHLMPPYGTPYAAMYPPGGVYAHPSFLVPPPQGL--GDSSPSAASEAMVVTP 714
            HPYMWG PQ +MPPYGTPYAA+Y  GGVY HP   +        G +SP A +EA+  +P
Sbjct: 59   HPYMWGPPQPMMPPYGTPYAAIYAHGGVYTHPGVPLGSHANAHAGATSPGA-TEAIAASP 117

Query: 715  LSMATPAKSSSSKDQGFTKKLKRL--------NGSTTVIXXXXXXXXXXXXXXDCGTEGS 870
            LS+ TP KSS++  QG   KL+          NG+T                 +  ++GS
Sbjct: 118  LSIDTPTKSSANGSQGLMNKLRGFDGLAMSIGNGNTDSADGGTDHGISQSGDTEGSSDGS 177

Query: 871  SGSDDN--------SIEG---KDRKVDGLT----AYGGNANATPSMALGVSPVPASLACK 1005
            +G+           S EG    DR+   LT    +   N N +   A+  S VPA+   K
Sbjct: 178  NGTTSKAGQKNKKRSREGTPANDRERKSLTPSSPSAAVNTNGSSEKAMRASKVPAAATEK 237

Query: 1006 QVETVPYSNGNARGVSVTPPAVVAEVP------SQHGLASGQXXXXXXXXXXXXXXQSNR 1167
             +  V   N         P A  A+        S   L                  QSNR
Sbjct: 238  VMGAVLSPNMTTASELRNPSAANAKTSPAKVSQSCSSLPGETWLQNERELKRERRKQSNR 297

Query: 1168 ESARRSRLRKQAEAEELAVKVDSLNAENLALRSEINQLTENSEKLRLENSSLMEKLKSGQ 1347
            ESARRSRLRKQAE EELA KV +L AEN+ LRSEIN+LTENSE LR E S+L++KLK+ +
Sbjct: 298  ESARRSRLRKQAETEELAKKVQTLTAENMTLRSEINKLTENSEHLRHE-SALLDKLKNAR 356

Query: 1348 HEGAGEMVSSNMLPQEGQPVSTENFLSKVENS----LSNTTKGIETNDNPNSGSKLRQLL 1515
               AGEM   + L +  QP  T + L++V NS     SN   G +  +N NSG+KL QLL
Sbjct: 357  VMQAGEMNKYDELHR--QPTGTADLLARVNNSGSTDKSNEEGGGDVFENRNSGTKLHQLL 414

Query: 1516 ESSPRGDAVAA 1548
            ++SPR DAVAA
Sbjct: 415  DASPRADAVAA 425


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