BLASTX nr result
ID: Coptis25_contig00007820
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007820
(483 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S... 88 9e-23
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S... 89 2e-22
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S... 87 5e-22
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S... 90 2e-21
ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [S... 87 2e-21
>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
gi|241946187|gb|EES19332.1| hypothetical protein
SORBIDRAFT_09g016160 [Sorghum bicolor]
Length = 1379
Score = 88.2 bits (217), Expect(3) = 9e-23
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = -1
Query: 252 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 73
GGTGKT+LY A+L +R +G IA+A TSGIAA+ILPGGRTAHSRFK+ + NSTC
Sbjct: 946 GGTGKTFLYKALLAAVRSKGLIAIATATSGIAASILPGGRTAHSRFKIPIKISSNSTCTF 1005
Query: 72 SKGSDLEELIKKRSVL 25
S + EL+++ S+L
Sbjct: 1006 SIQDETAELLRRASLL 1021
Score = 42.0 bits (97), Expect(3) = 9e-23
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = -2
Query: 401 QLLHNEMSVVIPDEDLLFIDRLNEDQLNAYKVILEVIEKKESRIFFVDGPG 249
+L+ E+SV + E L LN +QL + I+ + K+S++FFVDGPG
Sbjct: 896 RLVREELSVGVDPEHLQIKGSLNREQLAGFHEIMNHVLNKKSQVFFVDGPG 946
Score = 21.6 bits (44), Expect(3) = 9e-23
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 40 KKVSVVIWDEITM 2
++ S++IWDE+ M
Sbjct: 1016 RRASLLIWDEVAM 1028
>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
gi|241936047|gb|EES09192.1| hypothetical protein
SORBIDRAFT_05g001940 [Sorghum bicolor]
Length = 526
Score = 89.0 bits (219), Expect(3) = 2e-22
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = -1
Query: 252 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 73
GGTGKT+LY A+L +R EG IA+A TSGIAA+ILPGGRTAHSRFK+ + NSTC
Sbjct: 93 GGTGKTFLYKALLGRVRSEGLIAIATATSGIAASILPGGRTAHSRFKIPIKLADNSTCTF 152
Query: 72 SKGSDLEELIKKRSVL 25
+K S EL++ S++
Sbjct: 153 TKQSGTAELLRMASLV 168
Score = 40.0 bits (92), Expect(3) = 2e-22
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = -2
Query: 395 LHNEMSVVIPDEDLLFIDRLNEDQLNAYKVILEVIEKKESRIFFVDGPG 249
+ E++V + E L LN++Q + IL + K+S++FFVDGPG
Sbjct: 45 VREELAVPVDQEHLDIYTSLNKEQRQGFDKILNCVLNKKSQVFFVDGPG 93
Score = 21.6 bits (44), Expect(3) = 2e-22
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 40 KKVSVVIWDEITM 2
+ S+VIWDE+ M
Sbjct: 163 RMASLVIWDEVAM 175
>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
gi|241946122|gb|EES19267.1| hypothetical protein
SORBIDRAFT_09g008040 [Sorghum bicolor]
Length = 1679
Score = 87.0 bits (214), Expect(3) = 5e-22
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -1
Query: 252 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 73
GGTGKT+LY A+L +R +G IA+A TSGIAA+ILPGGRTAHSRFK+ + N+ C
Sbjct: 1246 GGTGKTFLYKALLARVRSKGLIAIATATSGIAASILPGGRTAHSRFKIPIKIGENTMCSF 1305
Query: 72 SKGSDLEELIKKRSVL 25
SK S EL+++ S++
Sbjct: 1306 SKQSGTAELLRRASLI 1321
Score = 39.7 bits (91), Expect(3) = 5e-22
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -2
Query: 395 LHNEMSVVIPDEDLLFIDRLNEDQLNAYKVILEVIEKKESRIFFVDGPG 249
+ E +V + E L + LN++Q + I++ + K+S++FFVDGPG
Sbjct: 1198 VREEQNVYVEQEHLDIFNSLNKEQRQGFDEIIQHVFDKKSQVFFVDGPG 1246
Score = 22.3 bits (46), Expect(3) = 5e-22
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 40 KKVSVVIWDEITM 2
++ S++IWDE+ M
Sbjct: 1316 RRASLIIWDEVAM 1328
>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
gi|241944914|gb|EES18059.1| hypothetical protein
SORBIDRAFT_09g017230 [Sorghum bicolor]
Length = 512
Score = 90.1 bits (222), Expect(2) = 2e-21
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = -1
Query: 252 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 73
GGTGKT+LY AIL +R EG I +A TSGIAA+ILPGGRTAHSRFK+ ++ NSTC
Sbjct: 78 GGTGKTFLYKAILARVRSEGLIGIATATSGIAASILPGGRTAHSRFKVPITLAENSTCSF 137
Query: 72 SKGSDLEELIKKRSVL 25
K S EL+++ S++
Sbjct: 138 GKQSGTAELLRRASLI 153
Score = 37.4 bits (85), Expect(2) = 2e-21
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -2
Query: 422 CDFFYFS----QLLHNEMSVVIPDEDLLFIDRLNEDQLNAYKVILEVIEKKESRIFFVDG 255
C+ FS + + E+S+ + E L LN++Q + I+ + +S++FFVDG
Sbjct: 17 CEIVQFSNDMMREVREELSIQVDQEHLDIYKSLNKEQQAGFDEIIHHVLNNKSQVFFVDG 76
Query: 254 PG 249
PG
Sbjct: 77 PG 78
>ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [Sorghum bicolor]
gi|241921048|gb|EER94192.1| hypothetical protein
SORBIDRAFT_01g021220 [Sorghum bicolor]
Length = 1439
Score = 87.0 bits (214), Expect(3) = 2e-21
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -1
Query: 252 GGTGKTYLYSAILVHIRREGEIALAMETSGIAATILPGGRTAHSRFKLLLSPKPNSTCLI 73
GGTGKT+LY A+L +R +G IA+A TSGIAA+ILPGGRTAHSRFK+ + N+ C
Sbjct: 1247 GGTGKTFLYKALLARVRSKGLIAIATATSGIAASILPGGRTAHSRFKIPIKIGENTMCSF 1306
Query: 72 SKGSDLEELIKKRSVL 25
SK S EL+++ S++
Sbjct: 1307 SKQSGTAELLRRASLI 1322
Score = 37.7 bits (86), Expect(3) = 2e-21
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -2
Query: 395 LHNEMSVVIPDEDLLFIDRLNEDQLNAYKVILEVIEKKESRIFFVDGPG 249
+ E +V + E L + LN++Q + I++ + +S++FFVDGPG
Sbjct: 1199 VREEQNVYVDQEHLDIFNSLNKEQRQGFDEIIQHVFANKSQVFFVDGPG 1247
Score = 22.3 bits (46), Expect(3) = 2e-21
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -3
Query: 40 KKVSVVIWDEITM 2
++ S++IWDE+ M
Sbjct: 1317 RRASLIIWDEVAM 1329