BLASTX nr result

ID: Coptis25_contig00007763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007763
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06599.1| pathogenesis-related protein 10c [Elaeis guineensis]    87   1e-15
ref|XP_002273815.2| PREDICTED: pathogenesis-related protein STH-...    86   3e-15
ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
gb|AEV89264.1| pathogenesis-related protein [Musa acuminata AAA ...    82   6e-14
gb|AFN42528.1| Betv1-like protein [Cannabis sativa]                    81   8e-14

>gb|ACF06599.1| pathogenesis-related protein 10c [Elaeis guineensis]
          Length = 159

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/71 (54%), Positives = 54/71 (76%)
 Frame = +1

Query: 73  MALTSFTTEFTSPVSARKLFNAGVLDGHNLGPKLMPQVIESIAILEGDGGVGTIKQANFT 252
           M+ +S++ E  SPV A +LF A VLD HNL PKL+P+++ S A +EGDGGVG+++Q  F+
Sbjct: 1   MSTSSWSLEIESPVPAARLFKAAVLDWHNLAPKLVPEIVVSAAGIEGDGGVGSVRQFQFS 60

Query: 253 DAMPFKYIKER 285
            AMPF Y+KER
Sbjct: 61  SAMPFSYVKER 71


>ref|XP_002273815.2| PREDICTED: pathogenesis-related protein STH-2 [Vitis vinifera]
           gi|147853968|emb|CAN79554.1| hypothetical protein
           VITISV_025728 [Vitis vinifera]
           gi|296083307|emb|CBI22943.3| unnamed protein product
           [Vitis vinifera]
          Length = 159

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/71 (53%), Positives = 53/71 (74%)
 Frame = +1

Query: 73  MALTSFTTEFTSPVSARKLFNAGVLDGHNLGPKLMPQVIESIAILEGDGGVGTIKQANFT 252
           M +TSFT EFT P++  ++F A +LD +NL PKL+PQ I SI +++GDGG GTI+Q NFT
Sbjct: 1   MGVTSFTQEFTCPIAPSRIFKALILDSNNLIPKLLPQTIRSIDVVQGDGGAGTIEQVNFT 60

Query: 253 DAMPFKYIKER 285
           +A   KY+K +
Sbjct: 61  EASNLKYVKHQ 71


>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/71 (47%), Positives = 52/71 (73%)
 Frame = +1

Query: 73  MALTSFTTEFTSPVSARKLFNAGVLDGHNLGPKLMPQVIESIAILEGDGGVGTIKQANFT 252
           M + S+T EFT P+S  ++F A +LD +NL PKL+PQ+++S+ ++ GDGG G+I+Q NFT
Sbjct: 1   MGVASYTQEFTCPISPARMFKALILDSNNLIPKLLPQIVKSVDLIHGDGGAGSIEQVNFT 60

Query: 253 DAMPFKYIKER 285
           +    KY+K R
Sbjct: 61  EGTDIKYVKHR 71


>gb|AEV89264.1| pathogenesis-related protein [Musa acuminata AAA Group]
          Length = 160

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/71 (52%), Positives = 52/71 (73%)
 Frame = +1

Query: 73  MALTSFTTEFTSPVSARKLFNAGVLDGHNLGPKLMPQVIESIAILEGDGGVGTIKQANFT 252
           MA  S+T E  S V A +LF A  LD H+L PK++P+++ S A+LEGDG VG+++Q NF+
Sbjct: 1   MASGSWTLEMESSVEASRLFRAAALDWHSLAPKVVPEIVVSGAVLEGDGSVGSVRQLNFS 60

Query: 253 DAMPFKYIKER 285
            A+PF Y+KER
Sbjct: 61  PALPFGYVKER 71


>gb|AFN42528.1| Betv1-like protein [Cannabis sativa]
          Length = 161

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/71 (50%), Positives = 51/71 (71%)
 Frame = +1

Query: 73  MALTSFTTEFTSPVSARKLFNAGVLDGHNLGPKLMPQVIESIAILEGDGGVGTIKQANFT 252
           M + ++ +EFTS ++  +LF A VLDG NL PK+ PQ +E + ILEG+GGVGTIK+  F 
Sbjct: 1   MGVFTYESEFTSSIAPARLFKAFVLDGDNLVPKIAPQAVEKVEILEGNGGVGTIKKITFG 60

Query: 253 DAMPFKYIKER 285
             +PFKY+K +
Sbjct: 61  QGVPFKYVKHK 71


Top