BLASTX nr result

ID: Coptis25_contig00007761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007761
         (2679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...   232   e-115
emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]                    210   e-107
gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo]       202   e-102
ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-...   202   e-101
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   220   e-101

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
            gi|297741679|emb|CBI32811.3| unnamed protein product
            [Vitis vinifera]
          Length = 453

 Score =  232 bits (592), Expect(4) = e-115
 Identities = 123/200 (61%), Positives = 150/200 (75%)
 Frame = -2

Query: 1331 AIRKVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTS 1152
            A +  A K VT++PKPE+VIEISP             K   +++ RE S KK  V T+TS
Sbjct: 109  AAKAAAQKKVTIKPKPEQVIEISPDSEEVKQE-----KPVSKKKGREGSSKK-NVKTMTS 162

Query: 1151 VLTARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYT 972
            +LTARSK ACG+TNKPK          A N LAAV+YVEDIYK+YKL E+ S VH YM +
Sbjct: 163  ILTARSKVACGLTNKPKEQIVDIDAADAGNDLAAVEYVEDIYKFYKLIESESQVHDYMDS 222

Query: 971  QHEINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAML 792
            Q EINEKMR ILV+WLIEVH+KFELMPETLYL ++IVDR+LS+++V R+ LQL+G+SAML
Sbjct: 223  QAEINEKMRAILVDWLIEVHHKFELMPETLYLTINIVDRFLSIKTVPRRELQLVGISAML 282

Query: 791  IASKYEEIWAPEVNDFVCIA 732
            +ASKYEEIWAPEVNDFVCI+
Sbjct: 283  MASKYEEIWAPEVNDFVCIS 302



 Score = 94.4 bits (233), Expect(4) = e-115
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = -1

Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYELIR 544
           QIL+MEK ILGKLEW+LTVPTPYV L  V ++KA + D ++E+M++F A L LT Y  + 
Sbjct: 310 QILMMEKAILGKLEWTLTVPTPYVFL--VRFVKASIPDTQMEHMVYFFAELGLTNYVTMM 367

Query: 543 YYSSLVDASAVYVARCTLNKTP 478
           Y  S++ ASAVY ARCTL+K+P
Sbjct: 368 YCPSMLAASAVYAARCTLSKSP 389



 Score = 82.4 bits (202), Expect(4) = e-115
 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
 Frame = -1

Query: 1635 MGSRPVVP--NQPRGGAVIVGGGTHKAGAAEGNNRRALINVTNRGVDGRGIDVNP---IT 1471
            M SRP+VP  +QPRG A+   G   K GAAEG NRRAL ++ N  V  RG+D  P   I+
Sbjct: 1    MASRPIVPQHHQPRGEALAGDGKQRKNGAAEGRNRRALGDIGNL-VTVRGVDGKPQPQIS 59

Query: 1470 RPVTRNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
            RPVTR+FCAQ+++  Q      NNKK + V VDG
Sbjct: 60   RPVTRSFCAQLLANAQAAAAAENNKKAVCVNVDG 93



 Score = 77.8 bits (190), Expect(4) = e-115
 Identities = 34/60 (56%), Positives = 47/60 (78%)
 Frame = -3

Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
           WDETLK HTG+S +QLL CAK+L  FHS+ ++++L+ + +KY+ P R  V+LLPPAK LL
Sbjct: 391 WDETLKVHTGYSETQLLGCAKLLVSFHSIAAENKLKVVYRKYSQPQRSGVSLLPPAKSLL 450


>emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]
          Length = 445

 Score =  210 bits (534), Expect(4) = e-107
 Identities = 112/197 (56%), Positives = 144/197 (73%)
 Frame = -2

Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTSVLT 1143
            K   K VT +PKPE+VIEISP             K   +++  +A+ KK K HT +SVLT
Sbjct: 105  KPGQKKVTTKPKPEEVIEISPDEEVH--------KDNNKKKEGDANTKK-KSHTYSSVLT 155

Query: 1142 ARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHE 963
            ARSKAACG+TNKPK          AN  LAAV+Y+EDIYK+YK+ EN S  H YM +Q E
Sbjct: 156  ARSKAACGLTNKPKEIIDIDAADTANE-LAAVEYIEDIYKFYKMVENESRPHDYMDSQPE 214

Query: 962  INEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIAS 783
            INE+MR ILV+WLI+VH+KF+L  ETLYL ++IVDR+L++++V R+ LQL+G+SAML+AS
Sbjct: 215  INERMRAILVDWLIDVHSKFDLSLETLYLTINIVDRFLAVKTVPRRELQLVGISAMLMAS 274

Query: 782  KYEEIWAPEVNDFVCIA 732
            KYEEIW PEVNDFVC++
Sbjct: 275  KYEEIWPPEVNDFVCLS 291



 Score = 95.5 bits (236), Expect(4) = e-107
 Identities = 52/82 (63%), Positives = 61/82 (74%)
 Frame = -1

Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYELIR 544
           QIL MEK+ILGKLEW+LTVPTP+V L  V +IKA V D  LENM  FL+ L +  Y  + 
Sbjct: 299 QILFMEKIILGKLEWTLTVPTPFVFL--VRFIKASVPDEALENMAHFLSELGMMHYATLM 356

Query: 543 YYSSLVDASAVYVARCTLNKTP 478
           Y SS+V ASAVY ARCTLNK+P
Sbjct: 357 YCSSMVAASAVYAARCTLNKSP 378



 Score = 79.3 bits (194), Expect(4) = e-107
 Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
 Frame = -1

Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKA-GAAEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
            M SRP+VP QPRG A +  G   K  GAA+G NR+AL ++ N  V  RG++V P  RP+T
Sbjct: 1    MASRPIVPQQPRGDAALGAGKQQKKNGAADGRNRKALGDIGNL-VTVRGVEVKP-NRPIT 58

Query: 1458 RNFCAQIISKPQETVTENNNKKQIV-------VVVDGHIVGKEVA 1345
            R+FCAQ+++  Q      NNKKQ          VV+G  V K VA
Sbjct: 59   RSFCAQLLANAQAAAAAENNKKQACPNVAGPPPVVEGVAVAKRVA 103



 Score = 74.7 bits (182), Expect(4) = e-107
 Identities = 32/61 (52%), Positives = 45/61 (73%)
 Frame = -3

Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
           W+ETLK HTG+S  QL+DCA++L   HS     +L+ + +KY+ P RG+VA+LPPAK LL
Sbjct: 380 WNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVYRKYSDPERGSVAVLPPAKNLL 439

Query: 289 N 287
           +
Sbjct: 440 S 440


>gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo]
          Length = 455

 Score =  202 bits (514), Expect(4) = e-102
 Identities = 110/200 (55%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
 Frame = -2

Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIR---RQSREASPKKMKVHTLTS 1152
            K A K V ++P  E VI+ISP             K E++   ++     P K K  TLTS
Sbjct: 107  KPAPKKVIIKPTSE-VIDISPDTVEKVE------KKEVKCANKKKEGEGPSKKKAQTLTS 159

Query: 1151 VLTARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYT 972
            VLTARSKAACGIT KPK            N LAAV+YVEDIY +YK AEN S  H YM +
Sbjct: 160  VLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDS 219

Query: 971  QHEINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAML 792
            Q EIN  MR ILV+WL++VHNKFEL PET YL ++I+DR+L+ + V R+ LQL+G+ AML
Sbjct: 220  QPEINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLLGIGAML 279

Query: 791  IASKYEEIWAPEVNDFVCIA 732
            IASKYEEIWAPEVNDFVC++
Sbjct: 280  IASKYEEIWAPEVNDFVCLS 299



 Score = 85.9 bits (211), Expect(4) = e-102
 Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
 Frame = -1

Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVV-SD*ELENMIFFLA*LALTQYE-L 550
           QILVMEK ILGKLEW+LTVPTPYV L    +IKA   S+ E+EN+++FLA L +  Y   
Sbjct: 307 QILVMEKKILGKLEWTLTVPTPYVFL--ARFIKASKDSNHEMENLVYFLAELGIMHYNTA 364

Query: 549 IRYYSSLVDASAVYVARCTLNKTP 478
           + Y  S++ ASAVY ARCTL KTP
Sbjct: 365 MMYCPSMIAASAVYAARCTLKKTP 388



 Score = 79.7 bits (195), Expect(4) = e-102
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = -3

Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
           WDETLK HTGFS  QL+DCAK+L  FH V  K++LQ I +KY+   RGAVAL+ PAK LL
Sbjct: 390 WDETLKKHTGFSEPQLIDCAKLLVGFHGVADKNKLQVIYRKYSSSERGAVALIQPAKALL 449



 Score = 77.0 bits (188), Expect(4) = e-102
 Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = -1

Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKAGA-AEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
            M SRP+VP Q RG AVI GG   K  A AE  NRRAL ++ N  V  RGID     RP+T
Sbjct: 1    MASRPIVPQQIRGEAVIGGGKQAKGVAGAEAKNRRALGDIGNL-VTVRGIDAKA-NRPIT 58

Query: 1458 RNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
            R+FCAQ+++  Q      NNKKQ+ V +DG
Sbjct: 59   RSFCAQLLANAQAAAKAENNKKQVPVSIDG 88


>ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
            gi|449529028|ref|XP_004171503.1| PREDICTED:
            G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
          Length = 455

 Score =  202 bits (515), Expect(4) = e-101
 Identities = 110/198 (55%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
 Frame = -2

Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREAS-PKKMKVHTLTSVL 1146
            K A K V V+P  E VI+ISP             +++  ++ +E   P K K  TLTSVL
Sbjct: 106  KPATKKVIVKPTSE-VIDISPDTVEKVEEK----EAKCAKKKKEGEGPAKKKAQTLTSVL 160

Query: 1145 TARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQH 966
            TARSKAACGIT KPK            N LAAV+YVEDIY +YK AEN S  H YM +Q 
Sbjct: 161  TARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDSQP 220

Query: 965  EINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIA 786
            EIN  MR ILV+WL++VHNKFEL PET YL ++I+DR+L+ + V R+ LQL+G+ AMLIA
Sbjct: 221  EINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLVGIGAMLIA 280

Query: 785  SKYEEIWAPEVNDFVCIA 732
            SKYEEIWAPEVNDFVC++
Sbjct: 281  SKYEEIWAPEVNDFVCLS 298



 Score = 85.5 bits (210), Expect(4) = e-101
 Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -1

Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVV-SD*ELENMIFFLA*LALTQYELI 547
           QILVMEK ILGKLEW+LTVPTPYV L    +IKA   S+ E+EN+++FLA L +  Y   
Sbjct: 306 QILVMEKKILGKLEWTLTVPTPYVFL--ARFIKASKDSNHEMENLVYFLAELGIMHYNTA 363

Query: 546 RYY-SSLVDASAVYVARCTLNKTP 478
             Y  S++ ASAVY ARCTL KTP
Sbjct: 364 MIYCPSMIAASAVYAARCTLKKTP 387



 Score = 77.0 bits (188), Expect(4) = e-101
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -3

Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
           WDETLK HTGFS  QL+DCAK+L  FH    K++LQ I +KY+   RGAVAL+ PAK LL
Sbjct: 389 WDETLKKHTGFSEPQLIDCAKLLVGFHGGADKNKLQVIYRKYSSSERGAVALIQPAKALL 448



 Score = 76.3 bits (186), Expect(4) = e-101
 Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = -1

Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKAGA-AEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
            M SRP+VP Q RG AV  GG   K  A AE  NRRAL ++ N  V  RGID     RP+T
Sbjct: 1    MASRPIVPQQIRGEAVNGGGKQAKGAAGAEAKNRRALGDIGNL-VTVRGIDAKA-NRPIT 58

Query: 1458 RNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
            R+FCAQ+++  Q      NNKKQ+ V +DG
Sbjct: 59   RSFCAQLLANAQAAAKAENNKKQVPVTIDG 88


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  220 bits (560), Expect(4) = e-101
 Identities = 115/193 (59%), Positives = 139/193 (72%)
 Frame = -2

Query: 1310 KNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTSVLTARSK 1131
            K  T++PKPE VIEIS               S+  +  +E  P K    TLTS LTARSK
Sbjct: 109  KAATIKPKPEAVIEIS---------------SDSEQVKKEKKPSKKDAPTLTSTLTARSK 153

Query: 1130 AACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEK 951
            AACG++ KPK          A+N LA V+YVEDIYK+YK+AEN S VH YM +Q EIN+K
Sbjct: 154  AACGLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAENESRVHNYMDSQPEINDK 213

Query: 950  MRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIASKYEE 771
            MR IL++WLIEVH+KFEL PETLYL ++IVDRYL++++  RK LQL+GMSAMLIASKYEE
Sbjct: 214  MRAILIDWLIEVHHKFELNPETLYLTINIVDRYLAVQTTLRKELQLVGMSAMLIASKYEE 273

Query: 770  IWAPEVNDFVCIA 732
            IWAPEVNDFVCI+
Sbjct: 274  IWAPEVNDFVCIS 286



 Score = 92.4 bits (228), Expect(4) = e-101
 Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
 Frame = -1

Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYEL-I 547
           Q+LVMEK ILG LEW+LTVPTPYV L  V +IKA V D  +ENM++F A L +  Y + +
Sbjct: 294 QVLVMEKRILGGLEWNLTVPTPYVFL--VRFIKASVPDSNMENMVYFFAELGMMNYSVAM 351

Query: 546 RYYSSLVDASAVYVARCTLNKTP 478
            Y SS++ ASAVY ARCT NKTP
Sbjct: 352 MYCSSMIAASAVYAARCTFNKTP 374



 Score = 73.6 bits (179), Expect(4) = e-101
 Identities = 34/61 (55%), Positives = 48/61 (78%)
 Frame = -3

Query: 472 NWDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYL 293
           +WD+TLK HTGFS  QL+DCAK+L + H++ + ++L+ I +KY+   RG+VALLPPAK L
Sbjct: 375 SWDDTLKLHTGFSEYQLIDCAKVLVNLHAMAADNKLKVIFRKYSSLERGSVALLPPAKSL 434

Query: 292 L 290
           L
Sbjct: 435 L 435



 Score = 55.5 bits (132), Expect(4) = e-101
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
 Frame = -1

Query: 1617 VPNQPRGGAVIVGGGTHKAGAAEGNNRRALINVTN----RGVDGRGIDVNPITRPVTRNF 1450
            VP Q R  A    G   K  A EG  RRAL ++ N    RGV+G+ +    ++RP+TR+F
Sbjct: 9    VPQQNRDAAP--AGMKQKNMAGEGKIRRALGDIGNLVTVRGVEGKPLP--QVSRPITRSF 64

Query: 1449 CAQIISKPQETVTENNNKKQIVVVVDG 1369
            CAQ+++  Q      NNKK   V VDG
Sbjct: 65   CAQLLANAQAAAVAENNKKCKAVNVDG 91


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