BLASTX nr result
ID: Coptis25_contig00007761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00007761
(2679 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ... 232 e-115
emb|CAA99990.1| mitotic cyclin [Sesbania rostrata] 210 e-107
gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo] 202 e-102
ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-... 202 e-101
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus] 220 e-101
>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
gi|297741679|emb|CBI32811.3| unnamed protein product
[Vitis vinifera]
Length = 453
Score = 232 bits (592), Expect(4) = e-115
Identities = 123/200 (61%), Positives = 150/200 (75%)
Frame = -2
Query: 1331 AIRKVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTS 1152
A + A K VT++PKPE+VIEISP K +++ RE S KK V T+TS
Sbjct: 109 AAKAAAQKKVTIKPKPEQVIEISPDSEEVKQE-----KPVSKKKGREGSSKK-NVKTMTS 162
Query: 1151 VLTARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYT 972
+LTARSK ACG+TNKPK A N LAAV+YVEDIYK+YKL E+ S VH YM +
Sbjct: 163 ILTARSKVACGLTNKPKEQIVDIDAADAGNDLAAVEYVEDIYKFYKLIESESQVHDYMDS 222
Query: 971 QHEINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAML 792
Q EINEKMR ILV+WLIEVH+KFELMPETLYL ++IVDR+LS+++V R+ LQL+G+SAML
Sbjct: 223 QAEINEKMRAILVDWLIEVHHKFELMPETLYLTINIVDRFLSIKTVPRRELQLVGISAML 282
Query: 791 IASKYEEIWAPEVNDFVCIA 732
+ASKYEEIWAPEVNDFVCI+
Sbjct: 283 MASKYEEIWAPEVNDFVCIS 302
Score = 94.4 bits (233), Expect(4) = e-115
Identities = 48/82 (58%), Positives = 63/82 (76%)
Frame = -1
Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYELIR 544
QIL+MEK ILGKLEW+LTVPTPYV L V ++KA + D ++E+M++F A L LT Y +
Sbjct: 310 QILMMEKAILGKLEWTLTVPTPYVFL--VRFVKASIPDTQMEHMVYFFAELGLTNYVTMM 367
Query: 543 YYSSLVDASAVYVARCTLNKTP 478
Y S++ ASAVY ARCTL+K+P
Sbjct: 368 YCPSMLAASAVYAARCTLSKSP 389
Score = 82.4 bits (202), Expect(4) = e-115
Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Frame = -1
Query: 1635 MGSRPVVP--NQPRGGAVIVGGGTHKAGAAEGNNRRALINVTNRGVDGRGIDVNP---IT 1471
M SRP+VP +QPRG A+ G K GAAEG NRRAL ++ N V RG+D P I+
Sbjct: 1 MASRPIVPQHHQPRGEALAGDGKQRKNGAAEGRNRRALGDIGNL-VTVRGVDGKPQPQIS 59
Query: 1470 RPVTRNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
RPVTR+FCAQ+++ Q NNKK + V VDG
Sbjct: 60 RPVTRSFCAQLLANAQAAAAAENNKKAVCVNVDG 93
Score = 77.8 bits (190), Expect(4) = e-115
Identities = 34/60 (56%), Positives = 47/60 (78%)
Frame = -3
Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
WDETLK HTG+S +QLL CAK+L FHS+ ++++L+ + +KY+ P R V+LLPPAK LL
Sbjct: 391 WDETLKVHTGYSETQLLGCAKLLVSFHSIAAENKLKVVYRKYSQPQRSGVSLLPPAKSLL 450
>emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]
Length = 445
Score = 210 bits (534), Expect(4) = e-107
Identities = 112/197 (56%), Positives = 144/197 (73%)
Frame = -2
Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTSVLT 1143
K K VT +PKPE+VIEISP K +++ +A+ KK K HT +SVLT
Sbjct: 105 KPGQKKVTTKPKPEEVIEISPDEEVH--------KDNNKKKEGDANTKK-KSHTYSSVLT 155
Query: 1142 ARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHE 963
ARSKAACG+TNKPK AN LAAV+Y+EDIYK+YK+ EN S H YM +Q E
Sbjct: 156 ARSKAACGLTNKPKEIIDIDAADTANE-LAAVEYIEDIYKFYKMVENESRPHDYMDSQPE 214
Query: 962 INEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIAS 783
INE+MR ILV+WLI+VH+KF+L ETLYL ++IVDR+L++++V R+ LQL+G+SAML+AS
Sbjct: 215 INERMRAILVDWLIDVHSKFDLSLETLYLTINIVDRFLAVKTVPRRELQLVGISAMLMAS 274
Query: 782 KYEEIWAPEVNDFVCIA 732
KYEEIW PEVNDFVC++
Sbjct: 275 KYEEIWPPEVNDFVCLS 291
Score = 95.5 bits (236), Expect(4) = e-107
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = -1
Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYELIR 544
QIL MEK+ILGKLEW+LTVPTP+V L V +IKA V D LENM FL+ L + Y +
Sbjct: 299 QILFMEKIILGKLEWTLTVPTPFVFL--VRFIKASVPDEALENMAHFLSELGMMHYATLM 356
Query: 543 YYSSLVDASAVYVARCTLNKTP 478
Y SS+V ASAVY ARCTLNK+P
Sbjct: 357 YCSSMVAASAVYAARCTLNKSP 378
Score = 79.3 bits (194), Expect(4) = e-107
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
Frame = -1
Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKA-GAAEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
M SRP+VP QPRG A + G K GAA+G NR+AL ++ N V RG++V P RP+T
Sbjct: 1 MASRPIVPQQPRGDAALGAGKQQKKNGAADGRNRKALGDIGNL-VTVRGVEVKP-NRPIT 58
Query: 1458 RNFCAQIISKPQETVTENNNKKQIV-------VVVDGHIVGKEVA 1345
R+FCAQ+++ Q NNKKQ VV+G V K VA
Sbjct: 59 RSFCAQLLANAQAAAAAENNKKQACPNVAGPPPVVEGVAVAKRVA 103
Score = 74.7 bits (182), Expect(4) = e-107
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -3
Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
W+ETLK HTG+S QL+DCA++L HS +L+ + +KY+ P RG+VA+LPPAK LL
Sbjct: 380 WNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVYRKYSDPERGSVAVLPPAKNLL 439
Query: 289 N 287
+
Sbjct: 440 S 440
>gb|ADN33876.1| mitotic B-type cyclin [Cucumis melo subsp. melo]
Length = 455
Score = 202 bits (514), Expect(4) = e-102
Identities = 110/200 (55%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Frame = -2
Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIR---RQSREASPKKMKVHTLTS 1152
K A K V ++P E VI+ISP K E++ ++ P K K TLTS
Sbjct: 107 KPAPKKVIIKPTSE-VIDISPDTVEKVE------KKEVKCANKKKEGEGPSKKKAQTLTS 159
Query: 1151 VLTARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYT 972
VLTARSKAACGIT KPK N LAAV+YVEDIY +YK AEN S H YM +
Sbjct: 160 VLTARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDS 219
Query: 971 QHEINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAML 792
Q EIN MR ILV+WL++VHNKFEL PET YL ++I+DR+L+ + V R+ LQL+G+ AML
Sbjct: 220 QPEINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLLGIGAML 279
Query: 791 IASKYEEIWAPEVNDFVCIA 732
IASKYEEIWAPEVNDFVC++
Sbjct: 280 IASKYEEIWAPEVNDFVCLS 299
Score = 85.9 bits (211), Expect(4) = e-102
Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = -1
Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVV-SD*ELENMIFFLA*LALTQYE-L 550
QILVMEK ILGKLEW+LTVPTPYV L +IKA S+ E+EN+++FLA L + Y
Sbjct: 307 QILVMEKKILGKLEWTLTVPTPYVFL--ARFIKASKDSNHEMENLVYFLAELGIMHYNTA 364
Query: 549 IRYYSSLVDASAVYVARCTLNKTP 478
+ Y S++ ASAVY ARCTL KTP
Sbjct: 365 MMYCPSMIAASAVYAARCTLKKTP 388
Score = 79.7 bits (195), Expect(4) = e-102
Identities = 38/60 (63%), Positives = 45/60 (75%)
Frame = -3
Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
WDETLK HTGFS QL+DCAK+L FH V K++LQ I +KY+ RGAVAL+ PAK LL
Sbjct: 390 WDETLKKHTGFSEPQLIDCAKLLVGFHGVADKNKLQVIYRKYSSSERGAVALIQPAKALL 449
Score = 77.0 bits (188), Expect(4) = e-102
Identities = 46/90 (51%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -1
Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKAGA-AEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
M SRP+VP Q RG AVI GG K A AE NRRAL ++ N V RGID RP+T
Sbjct: 1 MASRPIVPQQIRGEAVIGGGKQAKGVAGAEAKNRRALGDIGNL-VTVRGIDAKA-NRPIT 58
Query: 1458 RNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
R+FCAQ+++ Q NNKKQ+ V +DG
Sbjct: 59 RSFCAQLLANAQAAAKAENNKKQVPVSIDG 88
>ref|XP_004144323.1| PREDICTED: G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
gi|449529028|ref|XP_004171503.1| PREDICTED:
G2/mitotic-specific cyclin S13-6-like [Cucumis sativus]
Length = 455
Score = 202 bits (515), Expect(4) = e-101
Identities = 110/198 (55%), Positives = 135/198 (68%), Gaps = 1/198 (0%)
Frame = -2
Query: 1322 KVALKNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREAS-PKKMKVHTLTSVL 1146
K A K V V+P E VI+ISP +++ ++ +E P K K TLTSVL
Sbjct: 106 KPATKKVIVKPTSE-VIDISPDTVEKVEEK----EAKCAKKKKEGEGPAKKKAQTLTSVL 160
Query: 1145 TARSKAACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQH 966
TARSKAACGIT KPK N LAAV+YVEDIY +YK AEN S H YM +Q
Sbjct: 161 TARSKAACGITKKPKEQIFDIDAADVGNELAAVEYVEDIYTFYKEAENESRPHDYMDSQP 220
Query: 965 EINEKMRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIA 786
EIN MR ILV+WL++VHNKFEL PET YL ++I+DR+L+ + V R+ LQL+G+ AMLIA
Sbjct: 221 EINPSMRAILVDWLVDVHNKFELSPETFYLTINIIDRFLATKIVPRRELQLVGIGAMLIA 280
Query: 785 SKYEEIWAPEVNDFVCIA 732
SKYEEIWAPEVNDFVC++
Sbjct: 281 SKYEEIWAPEVNDFVCLS 298
Score = 85.5 bits (210), Expect(4) = e-101
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Frame = -1
Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVV-SD*ELENMIFFLA*LALTQYELI 547
QILVMEK ILGKLEW+LTVPTPYV L +IKA S+ E+EN+++FLA L + Y
Sbjct: 306 QILVMEKKILGKLEWTLTVPTPYVFL--ARFIKASKDSNHEMENLVYFLAELGIMHYNTA 363
Query: 546 RYY-SSLVDASAVYVARCTLNKTP 478
Y S++ ASAVY ARCTL KTP
Sbjct: 364 MIYCPSMIAASAVYAARCTLKKTP 387
Score = 77.0 bits (188), Expect(4) = e-101
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = -3
Query: 469 WDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYLL 290
WDETLK HTGFS QL+DCAK+L FH K++LQ I +KY+ RGAVAL+ PAK LL
Sbjct: 389 WDETLKKHTGFSEPQLIDCAKLLVGFHGGADKNKLQVIYRKYSSSERGAVALIQPAKALL 448
Score = 76.3 bits (186), Expect(4) = e-101
Identities = 45/90 (50%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = -1
Query: 1635 MGSRPVVPNQPRGGAVIVGGGTHKAGA-AEGNNRRALINVTNRGVDGRGIDVNPITRPVT 1459
M SRP+VP Q RG AV GG K A AE NRRAL ++ N V RGID RP+T
Sbjct: 1 MASRPIVPQQIRGEAVNGGGKQAKGAAGAEAKNRRALGDIGNL-VTVRGIDAKA-NRPIT 58
Query: 1458 RNFCAQIISKPQETVTENNNKKQIVVVVDG 1369
R+FCAQ+++ Q NNKKQ+ V +DG
Sbjct: 59 RSFCAQLLANAQAAAKAENNKKQVPVTIDG 88
>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
Length = 436
Score = 220 bits (560), Expect(4) = e-101
Identities = 115/193 (59%), Positives = 139/193 (72%)
Frame = -2
Query: 1310 KNVTVRPKPEKVIEISPXXXXXXXXXXXXEKSEIRRQSREASPKKMKVHTLTSVLTARSK 1131
K T++PKPE VIEIS S+ + +E P K TLTS LTARSK
Sbjct: 109 KAATIKPKPEAVIEIS---------------SDSEQVKKEKKPSKKDAPTLTSTLTARSK 153
Query: 1130 AACGITNKPKXXXXXXXXXXANNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEK 951
AACG++ KPK A+N LA V+YVEDIYK+YK+AEN S VH YM +Q EIN+K
Sbjct: 154 AACGLSKKPKDQIIDIDAADADNELAVVEYVEDIYKFYKIAENESRVHNYMDSQPEINDK 213
Query: 950 MRDILVEWLIEVHNKFELMPETLYLIVHIVDRYLSMRSVSRKILQLIGMSAMLIASKYEE 771
MR IL++WLIEVH+KFEL PETLYL ++IVDRYL++++ RK LQL+GMSAMLIASKYEE
Sbjct: 214 MRAILIDWLIEVHHKFELNPETLYLTINIVDRYLAVQTTLRKELQLVGMSAMLIASKYEE 273
Query: 770 IWAPEVNDFVCIA 732
IWAPEVNDFVCI+
Sbjct: 274 IWAPEVNDFVCIS 286
Score = 92.4 bits (228), Expect(4) = e-101
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -1
Query: 723 QILVMEKLILGKLEWSLTVPTPYV*LPCVIYIKAVVSD*ELENMIFFLA*LALTQYEL-I 547
Q+LVMEK ILG LEW+LTVPTPYV L V +IKA V D +ENM++F A L + Y + +
Sbjct: 294 QVLVMEKRILGGLEWNLTVPTPYVFL--VRFIKASVPDSNMENMVYFFAELGMMNYSVAM 351
Query: 546 RYYSSLVDASAVYVARCTLNKTP 478
Y SS++ ASAVY ARCT NKTP
Sbjct: 352 MYCSSMIAASAVYAARCTFNKTP 374
Score = 73.6 bits (179), Expect(4) = e-101
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = -3
Query: 472 NWDETLKHHTGFS*SQLLDCAKMLAHFHSVTSKDRLQAIRKKYTHPLRGAVALLPPAKYL 293
+WD+TLK HTGFS QL+DCAK+L + H++ + ++L+ I +KY+ RG+VALLPPAK L
Sbjct: 375 SWDDTLKLHTGFSEYQLIDCAKVLVNLHAMAADNKLKVIFRKYSSLERGSVALLPPAKSL 434
Query: 292 L 290
L
Sbjct: 435 L 435
Score = 55.5 bits (132), Expect(4) = e-101
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = -1
Query: 1617 VPNQPRGGAVIVGGGTHKAGAAEGNNRRALINVTN----RGVDGRGIDVNPITRPVTRNF 1450
VP Q R A G K A EG RRAL ++ N RGV+G+ + ++RP+TR+F
Sbjct: 9 VPQQNRDAAP--AGMKQKNMAGEGKIRRALGDIGNLVTVRGVEGKPLP--QVSRPITRSF 64
Query: 1449 CAQIISKPQETVTENNNKKQIVVVVDG 1369
CAQ+++ Q NNKK V VDG
Sbjct: 65 CAQLLANAQAAAVAENNKKCKAVNVDG 91