BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007757
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001132414.1| uncharacterized LOC100193862 [Zea mays] gi|1...   100   7e-19
ref|XP_003577324.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...    98   5e-18
ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...    96   2e-17
gb|ADK63400.1| C3HC4 type zinc finger protein [Brassica rapa]          96   2e-17

>ref|NP_001132414.1| uncharacterized LOC100193862 [Zea mays] gi|194694318|gb|ACF81243.1|
           unknown [Zea mays] gi|413934351|gb|AFW68902.1| putative
           RING zinc finger domain superfamily protein [Zea mays]
          Length = 176

 Score =  100 bits (249), Expect = 7e-19
 Identities = 58/178 (32%), Positives = 96/178 (53%)
 Frame = +3

Query: 453 QTTHDERLITRVHTQDQQVARVTTATSTNEADEPRLSSVHDAARDSAEELSPVFLNYPTA 632
           +T+  +R    ++ Q Q +      +S  +   P  S V  A   + +  +P     P A
Sbjct: 10  RTSEADRAPIDIYRQ-QNLEEHEPLSSAFDGSSPPSSIV--AVDTNLDTSTPDTYRAPPA 66

Query: 633 PDVECQVAPVTTTATANQADEPTHIIASNEEENRFYENNLEADDACKESKRSDLLPPPTM 812
           P     V  V TT    + D  +     +++E+   + +L+ D++CK++   D       
Sbjct: 67  PLPYDVVLAVPTTPGLEKLDNKSK--TDDQQESINDQESLKVDESCKKNVTED------- 117

Query: 813 EDEDRDECPICLDDYDEENPQIVPECKHHYHLGCILEWMERSNTCPVCNKAMIYEETS 986
           + E+ D CPICL++YDEENP+ V +C+HH+HL CILEWMER +TCPVC++ ++ +E S
Sbjct: 118 KAEEEDVCPICLEEYDEENPRSVTKCEHHFHLCCILEWMERKDTCPVCDQTILVDEMS 175


>ref|XP_003577324.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
           distachyon]
          Length = 221

 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 62/157 (39%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
 Frame = +3

Query: 546 DEPRLS--------SVHDAARDSAEELSPVFLNYPTAPDVECQVAPVTTTATANQADEP- 698
           D+PR S        S HD +  S EE  P+  NY    D E +        T +  D+P 
Sbjct: 83  DDPRFSPPLRDWFASRHDPSSHSPEESEPLRANY----DEEME--------TMSSVDKPI 130

Query: 699 -THIIASNEEENRFYENNLEADDACKESKRSDLLPPPTMEDEDRDECPICLDDYDEENPQ 875
            T+     +  +  Y + L      KES        P+ EDED   CP CL+DY  ENP+
Sbjct: 131 KTNYDTKMKRCSSAYGDKLSR----KESGNYFTYFSPSAEDED--VCPTCLEDYTSENPR 184

Query: 876 IVPECKHHYHLGCILEWMERSNTCPVCNKAMIYEETS 986
           IV +C HH+HLGCI EWMERS  CPVC K M + ET+
Sbjct: 185 IVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFNETT 221


>ref|XP_002336465.1| predicted protein [Populus trichocarpa] gi|222835076|gb|EEE73525.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = +3

Query: 723 EENRFYENNLEADDACKESKRS--DLLPPPTMEDEDRDECPICLDDYDEENPQIVPECKH 896
           EE +  ENN +A  +  + K    D     ++++ED   CP CL++Y  ENP+IV +C H
Sbjct: 114 EEGKSNENNPKAPISVSKEKAEPGDRYLHASIDEED--VCPTCLEEYSVENPRIVTQCNH 171

Query: 897 HYHLGCILEWMERSNTCPVCNKAMIYEETS 986
           HYHL CI EWMERS TCPVC+K MI++ETS
Sbjct: 172 HYHLSCIYEWMERSQTCPVCSKVMIFDETS 201


>ref|XP_003531881.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Glycine max]
          Length = 227

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 13/115 (11%)
 Frame = +3

Query: 681 NQADEPTH--IIASNEEENRFYENNLEADDACKE--SKRSDLLPPPTM---------EDE 821
           N+  EP    + A +E  N   + N  ++D  KE  SK S  L    +           E
Sbjct: 112 NEESEPLRGDVDADSESLNSGGKWNDTSEDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSE 171

Query: 822 DRDECPICLDDYDEENPQIVPECKHHYHLGCILEWMERSNTCPVCNKAMIYEETS 986
           + D CP CL++Y EENP+IV +C HH+HLGCI EWMERS++CPVC K M+++ET+
Sbjct: 172 EEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 226


>gb|ADK63400.1| C3HC4 type zinc finger protein [Brassica rapa]
          Length = 205

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 42/79 (53%), Positives = 58/79 (73%)
 Frame = +3

Query: 741 ENNLEADDACKESKRSDLLPPPTMEDEDRDECPICLDDYDEENPQIVPECKHHYHLGCIL 920
           E +LE+ +     K S  +  PT E+ED   CPICL++YD +NP++V +C+HH+HL CIL
Sbjct: 126 EIDLESTEDLDPKKLSKDVFLPTEEEED---CPICLEEYDMDNPKLVAKCEHHFHLACIL 182

Query: 921 EWMERSNTCPVCNKAMIYE 977
           EWMERS TCPVCNK M+++
Sbjct: 183 EWMERSETCPVCNKEMMFD 201