BLASTX nr result

ID: Coptis25_contig00007755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007755
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera]   185   3e-45
ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein...   182   2e-44
ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein...   179   2e-43
emb|CBI34431.3| unnamed protein product [Vitis vinifera]              178   4e-43
ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|22354...   171   6e-41

>emb|CAN63457.1| hypothetical protein VITISV_008241 [Vitis vinifera]
          Length = 526

 Score =  185 bits (470), Expect = 3e-45
 Identities = 96/143 (67%), Positives = 111/143 (77%)
 Frame = -1

Query: 431 FAFNDSNFSDRILKIEIMDGLSESKSDGEGCNSISDWAXXXXXXXXXXXXXENAIELSVY 252
           FAFNDSNFSDR+L+IEI+  L ESK DGEGCNSI+DWA              NA++  V+
Sbjct: 12  FAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKKE-NAVD--VH 68

Query: 251 HEDHILNCNQPDTDDGGPYENLDEDAVAMIEETHSGDEALEINSNSSWSMDCSTVVRVST 72
           HE+ ILNCN PDT+DG  YEN DE+AVAMIEE+  GDEA   +S+SSW MDCSTV+RV T
Sbjct: 69  HEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPGDEAGH-SSDSSWGMDCSTVLRVKT 127

Query: 71  IHISSPILAAKSPFFYKLFSNGM 3
           +HISSPILAAKSPFFYKLFSNGM
Sbjct: 128 LHISSPILAAKSPFFYKLFSNGM 150


>ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 722

 Score =  182 bits (462), Expect = 2e-44
 Identities = 97/147 (65%), Positives = 112/147 (76%), Gaps = 4/147 (2%)
 Frame = -1

Query: 431 FAFNDSNFSDRILKIEIMDGLSESKSDGEGCNSISDWAXXXXXXXXXXXXXENAIELSVY 252
           FAFNDSNFSDR+L+IEI+  L ESK DGEGCNSI+DWA              NA++  V+
Sbjct: 36  FAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKKE-NAVD--VH 92

Query: 251 HEDHILNCNQPDTDDGGPYENLDEDAVAMIEE----THSGDEALEINSNSSWSMDCSTVV 84
           HE+ ILNCN PDT+DG  YEN DE+AVAMIEE    T +GDEA   +S+SSW MDCSTV+
Sbjct: 93  HEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPDTFAGDEAGH-SSDSSWGMDCSTVL 151

Query: 83  RVSTIHISSPILAAKSPFFYKLFSNGM 3
           RV T+HISSPILAAKSPFFYKLFSNGM
Sbjct: 152 RVKTLHISSPILAAKSPFFYKLFSNGM 178


>ref|XP_002279915.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 553

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/143 (63%), Positives = 108/143 (75%)
 Frame = -1

Query: 431 FAFNDSNFSDRILKIEIMDGLSESKSDGEGCNSISDWAXXXXXXXXXXXXXENAIELSVY 252
           FAFNDSNFSDR+L+IEIM G  +S+S+GEGC SI+DWA              N  ++   
Sbjct: 34  FAFNDSNFSDRVLRIEIMAGSQDSRSEGEGCTSIADWARHRKRRREDIKKE-NGADIVAC 92

Query: 251 HEDHILNCNQPDTDDGGPYENLDEDAVAMIEETHSGDEALEINSNSSWSMDCSTVVRVST 72
            E+ ILNCNQPD DD    EN DE+AVAMIEE+ SGDEA E+ +NS+W+MDCSTVVR+ T
Sbjct: 93  PEEQILNCNQPDVDDVVACENEDEEAVAMIEESASGDEA-EVGNNSAWNMDCSTVVRIKT 151

Query: 71  IHISSPILAAKSPFFYKLFSNGM 3
           +HISSPILAAKSPFFYKLFSNGM
Sbjct: 152 LHISSPILAAKSPFFYKLFSNGM 174


>emb|CBI34431.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  178 bits (452), Expect = 4e-43
 Identities = 96/152 (63%), Positives = 111/152 (73%), Gaps = 9/152 (5%)
 Frame = -1

Query: 431 FAFNDSNFSDRILKIEIMDGLSESKSDGEGCNSISDWAXXXXXXXXXXXXXENAIELSVY 252
           FAFNDSNFSDR+L+IEI+  L ESK DGEGCNSI+DWA              NA++  V+
Sbjct: 83  FAFNDSNFSDRLLRIEIIADLPESKGDGEGCNSIADWARNRKRRREEIKKE-NAVD--VH 139

Query: 251 HEDHILNCNQPDTDDGGPYENLDEDAVAMIEET---------HSGDEALEINSNSSWSMD 99
           HE+ ILNCN PDT+DG  YEN DE+AVAMIEE+           GDEA   +S+SSW MD
Sbjct: 140 HEEQILNCNMPDTEDGVAYENQDEEAVAMIEESPPGVGMNLSQHGDEAGH-SSDSSWGMD 198

Query: 98  CSTVVRVSTIHISSPILAAKSPFFYKLFSNGM 3
           CSTV+RV T+HISSPILAAKSPFFYKLFSNGM
Sbjct: 199 CSTVLRVKTLHISSPILAAKSPFFYKLFSNGM 230


>ref|XP_002511951.1| atpob1, putative [Ricinus communis] gi|223549131|gb|EEF50620.1|
           atpob1, putative [Ricinus communis]
          Length = 549

 Score =  171 bits (433), Expect = 6e-41
 Identities = 93/143 (65%), Positives = 107/143 (74%)
 Frame = -1

Query: 431 FAFNDSNFSDRILKIEIMDGLSESKSDGEGCNSISDWAXXXXXXXXXXXXXENAIELSVY 252
           FAFNDSNFSDR+L+IEIMD   +++ DGEGCNSI+DWA              NA+E+S  
Sbjct: 32  FAFNDSNFSDRLLRIEIMDESPDNRCDGEGCNSIADWARHRKRRREDIKKD-NAVEVSAG 90

Query: 251 HEDHILNCNQPDTDDGGPYENLDEDAVAMIEETHSGDEALEINSNSSWSMDCSTVVRVST 72
            E+ ILN  QPD +D    EN DEDAVAMIEE  SGDEA++ N  S+WSMDCSTVVRV T
Sbjct: 91  AEEQILN--QPDMEDCVGCENQDEDAVAMIEEPPSGDEAVDGNE-STWSMDCSTVVRVKT 147

Query: 71  IHISSPILAAKSPFFYKLFSNGM 3
           +HISSPILAAKSPFFYKLFSNGM
Sbjct: 148 LHISSPILAAKSPFFYKLFSNGM 170


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