BLASTX nr result

ID: Coptis25_contig00007743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007743
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517378.1| calmodulin binding protein, putative [Ricinu...   128   5e-28
ref|NP_198835.1| RNA ligase/cyclic nucleotide phosphodiesterase ...   127   9e-28
ref|XP_002870721.1| calmodulin-binding protein [Arabidopsis lyra...   127   1e-27
emb|CBI34961.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002279925.1| PREDICTED: uncharacterized protein LOC100249...   127   1e-27

>ref|XP_002517378.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223543389|gb|EEF44920.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 183

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/88 (71%), Positives = 70/88 (79%)
 Frame = -3

Query: 278 TLSLLRFQMQLWDELKKVNIEIGEEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPV 99
           +LSLL+FQ QL D LKK  IEI EEY PDSW+P C VAQDVP+ R+ EAF VLRDLKLPV
Sbjct: 95  SLSLLQFQSQLCDALKKEGIEISEEYKPDSWIPYCAVAQDVPRARIGEAFCVLRDLKLPV 154

Query: 98  NGCGMDIALVEFSPVREVFSFALGNAAE 15
           +G  MDI LVEFSPVRE+FSF LGN  E
Sbjct: 155 SGYAMDIGLVEFSPVRELFSFVLGNCVE 182


>ref|NP_198835.1| RNA ligase/cyclic nucleotide phosphodiesterase family protein
           [Arabidopsis thaliana] gi|10177506|dbj|BAB10900.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|34098925|gb|AAQ56845.1| At5g40190 [Arabidopsis
           thaliana] gi|37202088|gb|AAQ89659.1| At5g40190
           [Arabidopsis thaliana] gi|51968364|dbj|BAD42874.1|
           unknown protein [Arabidopsis thaliana]
           gi|51969122|dbj|BAD43253.1| unknown protein [Arabidopsis
           thaliana] gi|332007135|gb|AED94518.1| RNA ligase/cyclic
           nucleotide phosphodiesterase family protein [Arabidopsis
           thaliana]
          Length = 183

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/88 (73%), Positives = 73/88 (82%)
 Frame = -3

Query: 278 TLSLLRFQMQLWDELKKVNIEIGEEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPV 99
           +LSLL+ Q QL D LKK +++IGEEY  DSWVP C VA DVPK+R+AEAFSVLRDLKLPV
Sbjct: 95  SLSLLQLQTQLCDMLKKESVDIGEEYRVDSWVPFCPVALDVPKSRMAEAFSVLRDLKLPV 154

Query: 98  NGCGMDIALVEFSPVREVFSFALGNAAE 15
           NG GM+I LVEFSPVREVFSF LGN  E
Sbjct: 155 NGYGMEIGLVEFSPVREVFSFPLGNTLE 182


>ref|XP_002870721.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316557|gb|EFH46980.1| calmodulin-binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 183

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/88 (72%), Positives = 73/88 (82%)
 Frame = -3

Query: 278 TLSLLRFQMQLWDELKKVNIEIGEEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPV 99
           +LSLL+ Q QL D +KK ++EIGE+Y  DSWVP C VA DVPK+R+AEAFSVLRDLKLPV
Sbjct: 95  SLSLLQLQSQLCDTMKKESVEIGEDYRVDSWVPFCPVALDVPKSRMAEAFSVLRDLKLPV 154

Query: 98  NGCGMDIALVEFSPVREVFSFALGNAAE 15
           NG GM+I LVEFSPVREVFSF LGN  E
Sbjct: 155 NGYGMEIGLVEFSPVREVFSFPLGNTLE 182


>emb|CBI34961.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/88 (72%), Positives = 69/88 (78%)
 Frame = -3

Query: 278 TLSLLRFQMQLWDELKKVNIEIGEEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPV 99
           TLSLL+F  QL D LKK  IEIGEEY PDSW+P C VAQ+VPK R+ EAFSVLRDLKLPV
Sbjct: 169 TLSLLQFHSQLCDALKKEGIEIGEEYRPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPV 228

Query: 98  NGCGMDIALVEFSPVREVFSFALGNAAE 15
            G  MDI LVEFSPVRE+FSF L N  E
Sbjct: 229 TGYAMDIGLVEFSPVRELFSFVLSNTLE 256


>ref|XP_002279925.1| PREDICTED: uncharacterized protein LOC100249281 isoform 1 [Vitis
           vinifera]
          Length = 183

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/88 (72%), Positives = 69/88 (78%)
 Frame = -3

Query: 278 TLSLLRFQMQLWDELKKVNIEIGEEYCPDSWVPQCIVAQDVPKNRVAEAFSVLRDLKLPV 99
           TLSLL+F  QL D LKK  IEIGEEY PDSW+P C VAQ+VPK R+ EAFSVLRDLKLPV
Sbjct: 95  TLSLLQFHSQLCDALKKEGIEIGEEYRPDSWIPHCPVAQEVPKIRMGEAFSVLRDLKLPV 154

Query: 98  NGCGMDIALVEFSPVREVFSFALGNAAE 15
            G  MDI LVEFSPVRE+FSF L N  E
Sbjct: 155 TGYAMDIGLVEFSPVRELFSFVLSNTLE 182


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