BLASTX nr result
ID: Coptis25_contig00007732
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007732 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28 emb|CBI23204.3| unnamed protein product [Vitis vinifera] 120 9e-26 ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 116 2e-24 ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 115 4e-24 ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi... 106 2e-21 >ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Vitis vinifera] Length = 732 Score = 130 bits (327), Expect = 1e-28 Identities = 57/86 (66%), Positives = 73/86 (84%) Frame = +3 Query: 3 SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182 +REI+ LKP +AGN+VQLAH+YAS+ RWDGVGE W QM+SL LKK+PGWS IELHG I+T Sbjct: 641 AREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITT 700 Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEMQ 260 FF DH+SHPQ+ E+M +L +L +EM+ Sbjct: 701 FFTDHSSHPQFEEIMLVLKILGSEMR 726 >emb|CBI23204.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 120 bits (302), Expect = 9e-26 Identities = 53/82 (64%), Positives = 69/82 (84%) Frame = +3 Query: 3 SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182 +REI+ LKP +AGN+VQLAH+YAS+ RWDGVGE W QM+SL LKK+PGWS IELHG I+T Sbjct: 641 AREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITT 700 Query: 183 FFVDHTSHPQYAEMMFMLNMLS 248 FF DH+SHPQ+ E++ + +L+ Sbjct: 701 FFTDHSSHPQFEEIIDRVLLLN 722 >ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Glycine max] Length = 764 Score = 116 bits (291), Expect = 2e-24 Identities = 51/85 (60%), Positives = 64/85 (75%) Frame = +3 Query: 3 SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182 + +I+ LKP AGNFVQLAH YAS+ +W+ VGE W MRSLGLKK+PGWS I++HG I+T Sbjct: 662 ANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITT 721 Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEM 257 FF DH SHPQ+ E++ L L EM Sbjct: 722 FFTDHNSHPQFQEIVCTLKFLRKEM 746 >ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Glycine max] Length = 755 Score = 115 bits (288), Expect = 4e-24 Identities = 50/85 (58%), Positives = 65/85 (76%) Frame = +3 Query: 3 SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182 + +I+ L+P AGNFVQLAH YAS+ +W+ VGE W MRSLGLKK+PGWS I++HG I+T Sbjct: 654 ANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITT 713 Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEM 257 FF DH SHPQ+ E++ L +L EM Sbjct: 714 FFTDHNSHPQFQEIVCTLKILRKEM 738 >ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04370-like [Cucumis sativus] Length = 743 Score = 106 bits (265), Expect = 2e-21 Identities = 47/87 (54%), Positives = 63/87 (72%) Frame = +3 Query: 3 SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182 +R++ LKP GNFVQLA++YAS+ RWDGV + W QMRSLGLKK PGWSSIE+HG T Sbjct: 642 ARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFT 701 Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEMQD 263 FF H SHP+ +++ + LS +++ Sbjct: 702 FFASHNSHPKIEKIILTVKALSKNIRN 728