BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007732
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CBI23204.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi...   115   4e-24
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21

>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/86 (66%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182
           +REI+ LKP +AGN+VQLAH+YAS+ RWDGVGE W QM+SL LKK+PGWS IELHG I+T
Sbjct: 641 AREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITT 700

Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEMQ 260
           FF DH+SHPQ+ E+M +L +L +EM+
Sbjct: 701 FFTDHSSHPQFEEIMLVLKILGSEMR 726


>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  120 bits (302), Expect = 9e-26
 Identities = 53/82 (64%), Positives = 69/82 (84%)
 Frame = +3

Query: 3   SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182
           +REI+ LKP +AGN+VQLAH+YAS+ RWDGVGE W QM+SL LKK+PGWS IELHG I+T
Sbjct: 641 AREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITT 700

Query: 183 FFVDHTSHPQYAEMMFMLNMLS 248
           FF DH+SHPQ+ E++  + +L+
Sbjct: 701 FFTDHSSHPQFEEIIDRVLLLN 722


>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  116 bits (291), Expect = 2e-24
 Identities = 51/85 (60%), Positives = 64/85 (75%)
 Frame = +3

Query: 3   SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182
           + +I+ LKP  AGNFVQLAH YAS+ +W+ VGE W  MRSLGLKK+PGWS I++HG I+T
Sbjct: 662 ANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITT 721

Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEM 257
           FF DH SHPQ+ E++  L  L  EM
Sbjct: 722 FFTDHNSHPQFQEIVCTLKFLRKEM 746


>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  115 bits (288), Expect = 4e-24
 Identities = 50/85 (58%), Positives = 65/85 (76%)
 Frame = +3

Query: 3   SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182
           + +I+ L+P  AGNFVQLAH YAS+ +W+ VGE W  MRSLGLKK+PGWS I++HG I+T
Sbjct: 654 ANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITT 713

Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEM 257
           FF DH SHPQ+ E++  L +L  EM
Sbjct: 714 FFTDHNSHPQFQEIVCTLKILRKEM 738


>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/87 (54%), Positives = 63/87 (72%)
 Frame = +3

Query: 3   SREIITLKPESAGNFVQLAHNYASLGRWDGVGETWMQMRSLGLKKVPGWSSIELHGIIST 182
           +R++  LKP   GNFVQLA++YAS+ RWDGV + W QMRSLGLKK PGWSSIE+HG   T
Sbjct: 642 ARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFT 701

Query: 183 FFVDHTSHPQYAEMMFMLNMLSTEMQD 263
           FF  H SHP+  +++  +  LS  +++
Sbjct: 702 FFASHNSHPKIEKIILTVKALSKNIRN 728