BLASTX nr result
ID: Coptis25_contig00007729
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007729 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266... 200 1e-49 ref|XP_002303438.1| shikimate kinase-like protein [Populus trich... 190 1e-46 ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arab... 187 1e-45 ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana] ... 187 1e-45 ref|XP_003612831.1| Shikimate kinase-like protein [Medicago trun... 184 5e-45 >ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera] gi|297742063|emb|CBI33850.3| unnamed protein product [Vitis vinifera] Length = 371 Score = 200 bits (508), Expect = 1e-49 Identities = 95/125 (76%), Positives = 107/125 (85%) Frame = -2 Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222 VIATLGG HGAA A+KW+HLY+GFT+WLS SE+ D+ AKEEARR I+ GS YSNADV Sbjct: 242 VIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEESAKEEARRHIQEGSLGYSNADV 301 Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42 VVK+ GWD HA+TVAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWP+IKPPGWDPS Sbjct: 302 VVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSLYIRLGCRGDWPDIKPPGWDPS 361 Query: 41 AGASV 27 GA V Sbjct: 362 TGAEV 366 >ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa] gi|222840870|gb|EEE78417.1| shikimate kinase-like protein [Populus trichocarpa] Length = 384 Score = 190 bits (482), Expect = 1e-46 Identities = 88/120 (73%), Positives = 104/120 (86%) Frame = -2 Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222 V++TLGG+ GAA A KWQHLY+GFT+WLS +E D+ AKEEAR+ +++ S AYSNADV Sbjct: 258 VVSTLGGKQGAAGKAYKWQHLYAGFTVWLSQTEALDEDSAKEEARKNVKDRSVAYSNADV 317 Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42 VVK++GWD HA++VAQA LSALK+LILSDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS Sbjct: 318 VVKLQGWDSDHAKSVAQASLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPS 377 >ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp. lyrata] gi|297325393|gb|EFH55813.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp. lyrata] Length = 388 Score = 187 bits (474), Expect = 1e-45 Identities = 86/121 (71%), Positives = 104/121 (85%) Frame = -2 Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222 V++TLGG+HGAA A++W+HLYSGFT+W+S +E TD+ AKEEARR + YSNADV Sbjct: 259 VVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRNKQEREIGYSNADV 318 Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42 VVK++GWD HA++VAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS Sbjct: 319 VVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLYIRLGCRGDWPNIKPPGWDPS 378 Query: 41 A 39 + Sbjct: 379 S 379 >ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana] gi|75100603|sp|O82290.2|SKL2_ARATH RecName: Full=Probable inactive shikimate kinase like 2, chloroplastic; Short=AtSKL2; Flags: Precursor gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12 [Arabidopsis thaliana] gi|18377827|gb|AAL67100.1| At2g35500/T32F12.12 [Arabidopsis thaliana] gi|20197350|gb|AAC36171.2| expressed protein [Arabidopsis thaliana] gi|330254020|gb|AEC09114.1| shikimate kinase like 2 [Arabidopsis thaliana] Length = 387 Score = 187 bits (474), Expect = 1e-45 Identities = 86/121 (71%), Positives = 104/121 (85%) Frame = -2 Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222 V++TLGG+HGAA A++W+HLYSGFT+W+S +E TD+ AKEEARR + YSNADV Sbjct: 258 VVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRSKQEREIGYSNADV 317 Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42 VVK++GWD HA++VAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS Sbjct: 318 VVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLYIRLGCRGDWPNIKPPGWDPS 377 Query: 41 A 39 + Sbjct: 378 S 378 >ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula] gi|355514166|gb|AES95789.1| Shikimate kinase-like protein [Medicago truncatula] Length = 377 Score = 184 bits (468), Expect = 5e-45 Identities = 82/120 (68%), Positives = 104/120 (86%) Frame = -2 Query: 398 IATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADVV 219 +ATLGG+HGAA ++KW+HLY+GFT+WLS +E +D+ A+EE R +++ AY+NADVV Sbjct: 249 VATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITAYTNADVV 308 Query: 218 VKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 39 VK++GWD +A++VAQ CLSALK+LILSDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS+ Sbjct: 309 VKLQGWDPAYAKSVAQGCLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSS 368