BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007729
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266...   200   1e-49
ref|XP_002303438.1| shikimate kinase-like protein [Populus trich...   190   1e-46
ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arab...   187   1e-45
ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana] ...   187   1e-45
ref|XP_003612831.1| Shikimate kinase-like protein [Medicago trun...   184   5e-45

>ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
           gi|297742063|emb|CBI33850.3| unnamed protein product
           [Vitis vinifera]
          Length = 371

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/125 (76%), Positives = 107/125 (85%)
 Frame = -2

Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222
           VIATLGG HGAA  A+KW+HLY+GFT+WLS SE+ D+  AKEEARR I+ GS  YSNADV
Sbjct: 242 VIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEESAKEEARRHIQEGSLGYSNADV 301

Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42
           VVK+ GWD  HA+TVAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWP+IKPPGWDPS
Sbjct: 302 VVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSLYIRLGCRGDWPDIKPPGWDPS 361

Query: 41  AGASV 27
            GA V
Sbjct: 362 TGAEV 366


>ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
           gi|222840870|gb|EEE78417.1| shikimate kinase-like
           protein [Populus trichocarpa]
          Length = 384

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/120 (73%), Positives = 104/120 (86%)
 Frame = -2

Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222
           V++TLGG+ GAA  A KWQHLY+GFT+WLS +E  D+  AKEEAR+ +++ S AYSNADV
Sbjct: 258 VVSTLGGKQGAAGKAYKWQHLYAGFTVWLSQTEALDEDSAKEEARKNVKDRSVAYSNADV 317

Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42
           VVK++GWD  HA++VAQA LSALK+LILSDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS
Sbjct: 318 VVKLQGWDSDHAKSVAQASLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPS 377


>ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
           lyrata] gi|297325393|gb|EFH55813.1| hypothetical protein
           ARALYDRAFT_482510 [Arabidopsis lyrata subsp. lyrata]
          Length = 388

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/121 (71%), Positives = 104/121 (85%)
 Frame = -2

Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222
           V++TLGG+HGAA  A++W+HLYSGFT+W+S +E TD+  AKEEARR  +     YSNADV
Sbjct: 259 VVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRNKQEREIGYSNADV 318

Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42
           VVK++GWD  HA++VAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS
Sbjct: 319 VVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLYIRLGCRGDWPNIKPPGWDPS 378

Query: 41  A 39
           +
Sbjct: 379 S 379


>ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana]
           gi|75100603|sp|O82290.2|SKL2_ARATH RecName:
           Full=Probable inactive shikimate kinase like 2,
           chloroplastic; Short=AtSKL2; Flags: Precursor
           gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12
           [Arabidopsis thaliana] gi|18377827|gb|AAL67100.1|
           At2g35500/T32F12.12 [Arabidopsis thaliana]
           gi|20197350|gb|AAC36171.2| expressed protein
           [Arabidopsis thaliana] gi|330254020|gb|AEC09114.1|
           shikimate kinase like 2 [Arabidopsis thaliana]
          Length = 387

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/121 (71%), Positives = 104/121 (85%)
 Frame = -2

Query: 401 VIATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADV 222
           V++TLGG+HGAA  A++W+HLYSGFT+W+S +E TD+  AKEEARR  +     YSNADV
Sbjct: 258 VVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEARRSKQEREIGYSNADV 317

Query: 221 VVKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPS 42
           VVK++GWD  HA++VAQA LSALK+LI+SDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS
Sbjct: 318 VVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLYIRLGCRGDWPNIKPPGWDPS 377

Query: 41  A 39
           +
Sbjct: 378 S 378


>ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula]
           gi|355514166|gb|AES95789.1| Shikimate kinase-like
           protein [Medicago truncatula]
          Length = 377

 Score =  184 bits (468), Expect = 5e-45
 Identities = 82/120 (68%), Positives = 104/120 (86%)
 Frame = -2

Query: 398 IATLGGEHGAAFDANKWQHLYSGFTIWLSPSETTDDIRAKEEARRQIENGSGAYSNADVV 219
           +ATLGG+HGAA  ++KW+HLY+GFT+WLS +E +D+  A+EE  R +++   AY+NADVV
Sbjct: 249 VATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITAYTNADVV 308

Query: 218 VKMRGWDHHHAQTVAQACLSALKKLILSDKTLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 39
           VK++GWD  +A++VAQ CLSALK+LILSDK LPGKKSLYIRLGCRGDWPNIKPPGWDPS+
Sbjct: 309 VKLQGWDPAYAKSVAQGCLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSS 368