BLASTX nr result

ID: Coptis25_contig00007728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007728
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation...   861   0.0  
ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation...   855   0.0  
ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation...   853   0.0  
ref|XP_003636390.1| Eukaryotic translation initiation factor 3 s...   842   0.0  
ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation...   835   0.0  

>ref|XP_002284115.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Vitis vinifera]
          Length = 517

 Score =  861 bits (2224), Expect = 0.0
 Identities = 412/459 (89%), Positives = 445/459 (96%)
 Frame = -3

Query: 1430 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1251
            GYDPN+VP++V+TFVVHLYRHIREKNVYEIHQMYE SFQ LS+R+FKE+PWPSVDAVA H
Sbjct: 20   GYDPNYVPDSVRTFVVHLYRHIREKNVYEIHQMYESSFQTLSDRLFKETPWPSVDAVAHH 79

Query: 1250 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1071
            VD+DHVFCLLYREMW+RHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 80   VDNDHVFCLLYREMWYRHLYARLSPTAKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 139

Query: 1070 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 891
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQ+DQAWNVYGVLNFLQALVEKS IIQILE
Sbjct: 140  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQYDQAWNVYGVLNFLQALVEKSMIIQILE 199

Query: 890  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 711
            QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ 
Sbjct: 200  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQQ 259

Query: 710  GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 531
             GVYTSVIGSHITTIYH+GFANLMLRRYVEAIREF+KIL+YI+K KQ+HQKSPQYEQILK
Sbjct: 260  -GVYTSVIGSHITTIYHFGFANLMLRRYVEAIREFNKILLYIYKTKQFHQKSPQYEQILK 318

Query: 530  KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 351
            KNEQMYALLAICLSLCPQ +LV + V +QL+EKYGEKM+RMQRYDDEA+ALYDELFSYAC
Sbjct: 319  KNEQMYALLAICLSLCPQEQLVEETVQSQLKEKYGEKMNRMQRYDDEAFALYDELFSYAC 378

Query: 350  PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLAT 171
            PKFITPS+P+YEEPLVNYNQ+AYRLQLKLFLYEVKQQQLLSGVR+FLK+YSTIS+GKLAT
Sbjct: 379  PKFITPSAPVYEEPLVNYNQEAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGKLAT 438

Query: 170  YMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYI 54
            YMEVD+PT+R+IL+TYKHKTHAVDSDGKI SNADVDFYI
Sbjct: 439  YMEVDDPTLRTILMTYKHKTHAVDSDGKIGSNADVDFYI 477


>ref|XP_003522695.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 514

 Score =  855 bits (2208), Expect = 0.0
 Identities = 412/463 (88%), Positives = 443/463 (95%)
 Frame = -3

Query: 1442 PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 1263
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 13   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 72

Query: 1262 VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 1083
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 73   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 132

Query: 1082 WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 903
            WLWDMVDEFVYQFQSFCQYRAKMKSKTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 133  WLWDMVDEFVYQFQSFCQYRAKMKSKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 192

Query: 902  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 723
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 193  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 252

Query: 722  ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 543
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 253  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 311

Query: 542  QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 363
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 312  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 371

Query: 362  SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIG 183
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+YSTIS+ 
Sbjct: 372  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLT 431

Query: 182  KLATYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYI 54
            KLA+YMEVDEPT+R+IL+TYKHKTHAVDSDGKI SNAD+DFYI
Sbjct: 432  KLASYMEVDEPTLRTILMTYKHKTHAVDSDGKITSNADLDFYI 474


>ref|XP_003526476.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Glycine max]
          Length = 516

 Score =  853 bits (2205), Expect = 0.0
 Identities = 411/463 (88%), Positives = 443/463 (95%)
 Frame = -3

Query: 1442 PELSGYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDA 1263
            P+  GYDPNFVP++VK+FVVHLYRHIREKNVYEIHQMYE SFQ LSER+FK++PWPSVDA
Sbjct: 15   PQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDA 74

Query: 1262 VAPHVDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 1083
            VA +VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQ
Sbjct: 75   VAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQ 134

Query: 1082 WLWDMVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTII 903
            WLWDMVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNV+GVLNFLQALVEKS II
Sbjct: 135  WLWDMVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVFGVLNFLQALVEKSAII 194

Query: 902  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPID 723
            QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PID
Sbjct: 195  QILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPID 254

Query: 722  ISQPGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYE 543
            I+Q  GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREF+KIL+YIFK KQYHQKSPQYE
Sbjct: 255  ITQQ-GVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYE 313

Query: 542  QILKKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELF 363
            QILKKNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKM RMQRYDDEA+A+YDELF
Sbjct: 314  QILKKNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMVRMQRYDDEAFAIYDELF 373

Query: 362  SYACPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIG 183
            SYACPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSGVR+FLK+YSTIS+ 
Sbjct: 374  SYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISLT 433

Query: 182  KLATYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYI 54
            KLA+YMEVDEPT+R+IL+TYKHKTHAVDSDGKI SNAD+DFYI
Sbjct: 434  KLASYMEVDEPTLRTILMTYKHKTHAVDSDGKITSNADLDFYI 476


>ref|XP_003636390.1| Eukaryotic translation initiation factor 3 subunit L [Medicago
            truncatula] gi|355502325|gb|AES83528.1| Eukaryotic
            translation initiation factor 3 subunit L [Medicago
            truncatula]
          Length = 511

 Score =  842 bits (2176), Expect = 0.0
 Identities = 407/459 (88%), Positives = 436/459 (94%)
 Frame = -3

Query: 1430 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1251
            GYDPNFVP+ VKTFVVHLYRHIREKNVYEIHQMYE SFQ LSER FK++PWPSVDAVA +
Sbjct: 14   GYDPNFVPDPVKTFVVHLYRHIREKNVYEIHQMYETSFQTLSERFFKDTPWPSVDAVAQY 73

Query: 1250 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1071
            VD+DHVFCLLYREMWFRHLYARL+PT +QRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 74   VDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 133

Query: 1070 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 891
            MVDEFVYQFQSFCQYRAKMK+KTE EIALL+QFDQAWNV+GVLNFLQALVEKSTIIQILE
Sbjct: 134  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLKQFDQAWNVFGVLNFLQALVEKSTIIQILE 193

Query: 890  QEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQP 711
            QEKEGLEQFT+ DGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL PIDISQ 
Sbjct: 194  QEKEGLEQFTSNDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLEPIDISQ- 252

Query: 710  GGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQILK 531
             GVYT VIG HITTIYHYGFANLMLRRYV+AIREF+KIL+YIFK K YHQKSPQYEQILK
Sbjct: 253  SGVYTIVIGCHITTIYHYGFANLMLRRYVDAIREFNKILLYIFKYKVYHQKSPQYEQILK 312

Query: 530  KNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYAC 351
            KNEQMYALLAI LSLCPQ +LV + VN+QLREKYGEKMSRMQRYDDEA+A+YDELFSYAC
Sbjct: 313  KNEQMYALLAISLSLCPQSRLVDETVNSQLREKYGEKMSRMQRYDDEAFAMYDELFSYAC 372

Query: 350  PKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLAT 171
            PKFITPS+P +EEPLVNYNQDAYRLQLKLFLYE KQQQLLSG+R+FLK+YSTIS+ KLA+
Sbjct: 373  PKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGLRTFLKVYSTISLAKLAS 432

Query: 170  YMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYI 54
            YMEVDEPT+R+IL+TYKHKTHAVDS GKIISNADVDFYI
Sbjct: 433  YMEVDEPTLRTILMTYKHKTHAVDSAGKIISNADVDFYI 471


>ref|XP_004136214.1| PREDICTED: eukaryotic translation initiation factor 3 subunit L-like
            [Cucumis sativus] gi|449508023|ref|XP_004163195.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit L-like [Cucumis sativus]
          Length = 528

 Score =  835 bits (2158), Expect = 0.0
 Identities = 403/460 (87%), Positives = 439/460 (95%), Gaps = 1/460 (0%)
 Frame = -3

Query: 1430 GYDPNFVPEAVKTFVVHLYRHIREKNVYEIHQMYEGSFQKLSERMFKESPWPSVDAVAPH 1251
            GYDPNFVP++VK+FVVHLYRHIREKNVYE HQMYE SFQ LS+R+FK++PWPSVDAVA  
Sbjct: 30   GYDPNFVPDSVKSFVVHLYRHIREKNVYETHQMYETSFQSLSDRLFKDTPWPSVDAVAHF 89

Query: 1250 VDHDHVFCLLYREMWFRHLYARLSPTPKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 1071
            VD+DHVFCLLYREMWFRHLYARLSPT KQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD
Sbjct: 90   VDNDHVFCLLYREMWFRHLYARLSPTLKQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWD 149

Query: 1070 MVDEFVYQFQSFCQYRAKMKSKTEAEIALLRQFDQAWNVYGVLNFLQALVEKSTIIQILE 891
            MVDEFVYQFQSFCQYRAKMK+KTE EIALLRQFDQAWNVYGVLN+LQA VEKS+II ILE
Sbjct: 150  MVDEFVYQFQSFCQYRAKMKNKTEQEIALLRQFDQAWNVYGVLNYLQAFVEKSSIIHILE 209

Query: 890  QEKEGLEQFTATDGYDYNGGS-NVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLIPIDISQ 714
            +EKEGLEQFTATDGYDY+GGS NVLKVLGYFSMVGLLRVHCLLGDYHTGLKCL+PIDISQ
Sbjct: 210  EEKEGLEQFTATDGYDYSGGSSNVLKVLGYFSMVGLLRVHCLLGDYHTGLKCLLPIDISQ 269

Query: 713  PGGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFSKILIYIFKVKQYHQKSPQYEQIL 534
             G V+TSVIGSHITTIYHYGFANLMLRRYV+AI EF++IL+YI+K KQYHQKSPQYEQIL
Sbjct: 270  QG-VFTSVIGSHITTIYHYGFANLMLRRYVDAIHEFNRILLYIYKTKQYHQKSPQYEQIL 328

Query: 533  KKNEQMYALLAICLSLCPQGKLVADDVNTQLREKYGEKMSRMQRYDDEAYALYDELFSYA 354
            KKNEQMYALLAIC+SLCPQGKLV + VN+QLREKYGEKM RMQRYD+EA+A+YDELFSYA
Sbjct: 329  KKNEQMYALLAICVSLCPQGKLVDETVNSQLREKYGEKMIRMQRYDEEAFAIYDELFSYA 388

Query: 353  CPKFITPSSPIYEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRSFLKLYSTISIGKLA 174
            CPKFITPS+P +EEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVR+FLK+YSTIS+G+LA
Sbjct: 389  CPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEVKQQQLLSGVRTFLKVYSTISLGQLA 448

Query: 173  TYMEVDEPTVRSILLTYKHKTHAVDSDGKIISNADVDFYI 54
             YMEVDE T+R+ILLTYKHKTHAVDS GKI+SNADVDF+I
Sbjct: 449  IYMEVDESTLRTILLTYKHKTHAVDSAGKIMSNADVDFFI 488


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