BLASTX nr result

ID: Coptis25_contig00007725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007725
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809...   116   4e-24
ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776...   116   4e-24
gb|ACU23136.1| unknown [Glycine max]                                  116   4e-24
emb|CBI31404.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...   115   8e-24

>ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/96 (59%), Positives = 62/96 (64%)
 Frame = +2

Query: 2   RDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXXXXXX 181
           RDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM              
Sbjct: 42  RDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQGYRGG 99

Query: 182 XXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 289
                             +CFKCGRPGHWAR+CP A
Sbjct: 100 YSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135


>ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/96 (59%), Positives = 62/96 (64%)
 Frame = +2

Query: 2   RDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXXXXXX 181
           RDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM              
Sbjct: 42  RDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDADQGYRGG 99

Query: 182 XXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 289
                             +CFKCGRPGHWAR+CP A
Sbjct: 100 YSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135


>gb|ACU23136.1| unknown [Glycine max]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/96 (59%), Positives = 62/96 (64%)
 Frame = +2

Query: 2   RDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXXXXXX 181
           RDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM              
Sbjct: 42  RDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQGYRGG 99

Query: 182 XXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 289
                             +CFKCGRPGHWAR+CP A
Sbjct: 100 YSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  115 bits (288), Expect = 8e-24
 Identities = 56/96 (58%), Positives = 62/96 (64%)
 Frame = +2

Query: 2   RDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXXXXXX 181
           RDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM              
Sbjct: 58  RDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHGYNGGY 115

Query: 182 XXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 289
                             +CFKCGRPGHWAR+CPS+
Sbjct: 116 SSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSS 151


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
           vinifera]
          Length = 278

 Score =  115 bits (288), Expect = 8e-24
 Identities = 56/96 (58%), Positives = 62/96 (64%)
 Frame = +2

Query: 2   RDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXXXXXX 181
           RDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM              
Sbjct: 42  RDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHGYNGGY 99

Query: 182 XXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 289
                             +CFKCGRPGHWAR+CPS+
Sbjct: 100 SSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSS 135


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