BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007719
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   373   e-102
gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisu...   373   e-102
sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding prote...   373   e-102
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...   373   e-102
gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein ...   372   e-101

>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  373 bits (958), Expect = e-102
 Identities = 181/182 (99%), Positives = 182/182 (100%)
 Frame = +3

Query: 3   GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 182
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 26  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 85

Query: 183 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 362
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
Sbjct: 86  SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 145

Query: 363 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 542
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 146 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 205

Query: 543 LE 548
           LE
Sbjct: 206 LE 207


>gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
          Length = 266

 Score =  373 bits (958), Expect = e-102
 Identities = 181/182 (99%), Positives = 182/182 (100%)
 Frame = +3

Query: 3   GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 182
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 60  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 119

Query: 183 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 362
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179

Query: 363 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 542
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239

Query: 543 LE 548
           LE
Sbjct: 240 LE 241


>sp|P27490.1|CB28_PEA RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
           AltName: Full=LHCII type I CAB-8; Flags: Precursor
           gi|20669|emb|CAA39883.1| chlorophyll a/b binding protein
           [Pisum sativum]
          Length = 268

 Score =  373 bits (958), Expect = e-102
 Identities = 181/182 (99%), Positives = 182/182 (100%)
 Frame = +3

Query: 3   GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 182
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 62  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 121

Query: 183 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 362
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
Sbjct: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 181

Query: 363 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 542
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 182 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241

Query: 543 LE 548
           LE
Sbjct: 242 LE 243


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score =  373 bits (958), Expect = e-102
 Identities = 181/182 (99%), Positives = 182/182 (100%)
 Frame = +3

Query: 3   GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 182
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 63  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122

Query: 183 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 362
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
Sbjct: 123 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 182

Query: 363 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 542
           GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 183 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 242

Query: 543 LE 548
           LE
Sbjct: 243 LE 244


>gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
           sativum]
          Length = 266

 Score =  372 bits (954), Expect = e-101
 Identities = 180/182 (98%), Positives = 182/182 (100%)
 Frame = +3

Query: 3   GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 182
           GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 60  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 119

Query: 183 SRNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 362
           SRNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG
Sbjct: 120 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 179

Query: 363 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 542
           GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 239

Query: 543 LE 548
           LE
Sbjct: 240 LE 241