BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007718
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      181   7e-44
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   181   7e-44
gb|AFK40061.1| unknown [Medicago truncatula]                          181   7e-44
gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisu...   181   7e-44
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   181   7e-44

>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +2

Query: 2   QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 181
           QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
Sbjct: 137 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 196

Query: 182 PLGLADDPEAFAELKVKELKNGRLAMFSM 268
           PLGLADDPEAFAELKVKELKNGRLAMFSM
Sbjct: 197 PLGLADDPEAFAELKVKELKNGRLAMFSM 225


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +2

Query: 2   QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 181
           QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
Sbjct: 103 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 162

Query: 182 PLGLADDPEAFAELKVKELKNGRLAMFSM 268
           PLGLADDPEAFAELKVKELKNGRLAMFSM
Sbjct: 163 PLGLADDPEAFAELKVKELKNGRLAMFSM 191


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +2

Query: 2   QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 181
           QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
Sbjct: 137 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 196

Query: 182 PLGLADDPEAFAELKVKELKNGRLAMFSM 268
           PLGLADDPEAFAELKVKELKNGRLAMFSM
Sbjct: 197 PLGLADDPEAFAELKVKELKNGRLAMFSM 225


>gb|ABN49454.2| chloroplast chlorophyll a/b binding protein [Pisum sativum]
          Length = 266

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +2

Query: 2   QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 181
           QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
Sbjct: 137 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 196

Query: 182 PLGLADDPEAFAELKVKELKNGRLAMFSM 268
           PLGLADDPEAFAELKVKELKNGRLAMFSM
Sbjct: 197 PLGLADDPEAFAELKVKELKNGRLAMFSM 225


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/89 (100%), Positives = 89/89 (100%)
 Frame = +2

Query: 2   QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 181
           QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD
Sbjct: 125 QIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFD 184

Query: 182 PLGLADDPEAFAELKVKELKNGRLAMFSM 268
           PLGLADDPEAFAELKVKELKNGRLAMFSM
Sbjct: 185 PLGLADDPEAFAELKVKELKNGRLAMFSM 213