BLASTX nr result

ID: Coptis25_contig00007714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007714
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299940.1| predicted protein [Populus trichocarpa] gi|2...   329   6e-88
ref|XP_003633561.1| PREDICTED: protein FRA10AC1-like [Vitis vini...   326   5e-87
ref|XP_004135932.1| PREDICTED: protein FRA10AC1-like [Cucumis sa...   318   2e-84
gb|AAC31614.1| Phyb1 [Pimpinella brachycarpa]                         315   9e-84
ref|XP_003541610.1| PREDICTED: protein FRA10AC1-like [Glycine max]    309   9e-82

>ref|XP_002299940.1| predicted protein [Populus trichocarpa] gi|222847198|gb|EEE84745.1|
            predicted protein [Populus trichocarpa]
          Length = 243

 Score =  329 bits (844), Expect = 6e-88
 Identities = 163/243 (67%), Positives = 182/243 (74%)
 Frame = -3

Query: 1054 MASFGSIKSAIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGKGVKTSDVLPIKTD 875
            MASFGS+KSA+FD+EERKQQYQ+HIRGLNAYDRHKKFLNDY  +YGKG  T++ LPI+TD
Sbjct: 1    MASFGSLKSAVFDREERKQQYQSHIRGLNAYDRHKKFLNDYVSYYGKGKSTNEKLPIRTD 60

Query: 874  RDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRIEKE 695
            RDTLREGYRFIRSEEDDMD+SWEQRLVKRYY+KLFKEYCIADMS YK GKIGLRWR EKE
Sbjct: 61   RDTLREGYRFIRSEEDDMDASWEQRLVKRYYDKLFKEYCIADMSHYKVGKIGLRWRTEKE 120

Query: 694  VISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVYXXXXX 515
            VISGKGQFICG+K CD KDGLASYEVNFSY+EAGENKQALVKL+ C +CAEKL Y     
Sbjct: 121  VISGKGQFICGNKHCDVKDGLASYEVNFSYFEAGENKQALVKLILCDRCAEKLHYKRRKE 180

Query: 514  XXXXXXXXXXXXXXXXXXXRSSSHSXXXXXXXXXXXXKASTSTDDQKNDDNENFDEFLTG 335
                                                 K + S  ++K DD++NFDEFL G
Sbjct: 181  KEQIEKREKGDRIRKRELLEVVDDLDNEGSEEKRRGKKPTISGGNKKTDDDDNFDEFLEG 240

Query: 334  MFP 326
            MFP
Sbjct: 241  MFP 243


>ref|XP_003633561.1| PREDICTED: protein FRA10AC1-like [Vitis vinifera]
          Length = 245

 Score =  326 bits (836), Expect = 5e-87
 Identities = 164/245 (66%), Positives = 183/245 (74%), Gaps = 2/245 (0%)
 Frame = -3

Query: 1054 MASFGSIKSAIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGKGVKTSDVLPIKTD 875
            MASFGS+KS IFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYG+   T   LP+KTD
Sbjct: 1    MASFGSLKSVIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGEQRSTHTKLPVKTD 60

Query: 874  RDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRIEKE 695
            +DT+REGYRFI SEED+MD SWEQRLVKRY++KLFKEYCIADMS+YK GKIGLRWR EKE
Sbjct: 61   QDTIREGYRFILSEEDEMDQSWEQRLVKRYHDKLFKEYCIADMSQYKSGKIGLRWRTEKE 120

Query: 694  VISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVYXXXXX 515
            VISGKGQFICG+K CD++DGL SYEVNFSY+EAGENKQALVKLV C++CAEKL Y     
Sbjct: 121  VISGKGQFICGNKHCDKRDGLTSYEVNFSYFEAGENKQALVKLVTCERCAEKLNYKKRKE 180

Query: 514  XXXXXXXXXXXXXXXXXXXRS--SSHSXXXXXXXXXXXXKASTSTDDQKNDDNENFDEFL 341
                                S   + +            KASTS  D K +D+E FDEFL
Sbjct: 181  KEQSAKREKEEHKRKRERVSSDDDTENEHKQSRERRKGKKASTSARDHKTEDDETFDEFL 240

Query: 340  TGMFP 326
             GMFP
Sbjct: 241  EGMFP 245


>ref|XP_004135932.1| PREDICTED: protein FRA10AC1-like [Cucumis sativus]
            gi|449488847|ref|XP_004158190.1| PREDICTED: protein
            FRA10AC1-like [Cucumis sativus]
          Length = 242

 Score =  318 bits (814), Expect = 2e-84
 Identities = 159/243 (65%), Positives = 181/243 (74%)
 Frame = -3

Query: 1054 MASFGSIKSAIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGKGVKTSDVLPIKTD 875
            MASFGS+K+AIF++EERKQQYQAH+RGLNAYDRHKKF++DY  FYGK     + LPIKTD
Sbjct: 1    MASFGSLKNAIFEREERKQQYQAHVRGLNAYDRHKKFMHDYVHFYGKNKTGEEKLPIKTD 60

Query: 874  RDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRIEKE 695
            +DTLREGYRFIRSEEDDMD+SWEQ+LVKRYY+KLFKEYCIADM++YK GKIGLRWR EKE
Sbjct: 61   QDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEYCIADMTQYKSGKIGLRWRAEKE 120

Query: 694  VISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVYXXXXX 515
            V+SGKGQFICG+K CDEK GLASYEVNFSY+EAGENKQALVKLV C +C++KL Y     
Sbjct: 121  VMSGKGQFICGNKHCDEKSGLASYEVNFSYFEAGENKQALVKLVTCGRCSKKLHY-KRQK 179

Query: 514  XXXXXXXXXXXXXXXXXXXRSSSHSXXXXXXXXXXXXKASTSTDDQKNDDNENFDEFLTG 335
                                 SS +            KASTS  D K D  E FDE+L G
Sbjct: 180  EKEKLERKEQEMSKRKRPSDDSSDTEDEGSRTRRKGKKASTSFGDHKADSKEEFDEYLEG 239

Query: 334  MFP 326
            MFP
Sbjct: 240  MFP 242


>gb|AAC31614.1| Phyb1 [Pimpinella brachycarpa]
          Length = 244

 Score =  315 bits (808), Expect = 9e-84
 Identities = 155/241 (64%), Positives = 176/241 (73%)
 Frame = -3

Query: 1051 ASFGSIKSAIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGKGVKTSDVLPIKTDR 872
            +S GS+KS IFD++ RKQQYQ+HI GLNAYDRHKKF++DY  FYGK V   + LP+KTD+
Sbjct: 3    SSLGSLKSVIFDRQARKQQYQSHILGLNAYDRHKKFISDYVDFYGKDVSAEEKLPVKTDK 62

Query: 871  DTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRIEKEV 692
            DTLREGYRFIRSEEDD+D SWEQRLVKRYYNKLFKEYCIADMS+Y+ GKIGLRWR EKEV
Sbjct: 63   DTLREGYRFIRSEEDDLDPSWEQRLVKRYYNKLFKEYCIADMSQYRTGKIGLRWRTEKEV 122

Query: 691  ISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVYXXXXXX 512
            ISGKGQF+CG+K CDEKDGLASYEVNFSY+EAGE+KQALVKLV C++CA+KL Y      
Sbjct: 123  ISGKGQFVCGNKHCDEKDGLASYEVNFSYFEAGESKQALVKLVTCERCAKKLNYKKQKEK 182

Query: 511  XXXXXXXXXXXXXXXXXXRSSSHSXXXXXXXXXXXXKASTSTDDQKNDDNENFDEFLTGM 332
                                   +            K STS  DQK  D ENFDEFL GM
Sbjct: 183  LKRNEKEVLRRKRERSESDDDIPTEYKGNKDSRKVMKTSTSLGDQKAGDTENFDEFLEGM 242

Query: 331  F 329
            F
Sbjct: 243  F 243


>ref|XP_003541610.1| PREDICTED: protein FRA10AC1-like [Glycine max]
          Length = 246

 Score =  309 bits (791), Expect = 9e-82
 Identities = 159/246 (64%), Positives = 181/246 (73%), Gaps = 3/246 (1%)
 Frame = -3

Query: 1054 MASFGSIKSAIFDKEERKQQYQAHIRGLNAYDRHKKFLNDYAGFYGKGVKTSDVLPIKTD 875
            MASFGS+KS IF+KEERKQQYQ+HIRGLNAYDRHKKF++DY  FYGK   ++  LPIKTD
Sbjct: 1    MASFGSLKSTIFEKEERKQQYQSHIRGLNAYDRHKKFIDDYVKFYGKERPSNLKLPIKTD 60

Query: 874  RDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRIEKE 695
            +DTLREGYRFIRSEEDDM+ SWEQRLVKRYY+KLFKEYC+ADMS+YK GKIGLRWR EKE
Sbjct: 61   QDTLREGYRFIRSEEDDMNPSWEQRLVKRYYDKLFKEYCLADMSQYKIGKIGLRWRTEKE 120

Query: 694  VISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVYXXXXX 515
            VISGKGQFICG+K C+EKDGLASYEVNF Y+EAGENKQALVKLV C++CA KL Y     
Sbjct: 121  VISGKGQFICGNKHCNEKDGLASYEVNFYYFEAGENKQALVKLVTCERCAFKLNYKRQKE 180

Query: 514  XXXXXXXXXXXXXXXXXXXRSSS--HSXXXXXXXXXXXXKASTSTDDQK-NDDNENFDEF 344
                               +S                  +A TS  D K +DD++N DEF
Sbjct: 181  KEQLEKRQQEQDRRKRNRSKSDDDLDDFHESKERRRKGKRALTSASDHKIDDDDDNLDEF 240

Query: 343  LTGMFP 326
            L GMFP
Sbjct: 241  LEGMFP 246


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