BLASTX nr result

ID: Coptis25_contig00007703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007703
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278959.1| PREDICTED: uncharacterized protein LOC100256...   247   3e-63
ref|XP_002330508.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|NP_001236268.1| uncharacterized protein LOC100306012 [Glycin...   237   2e-60
gb|AFK47572.1| unknown [Lotus japonicus]                              233   3e-59
emb|CBI27813.3| unnamed protein product [Vitis vinifera]              231   1e-58

>ref|XP_002278959.1| PREDICTED: uncharacterized protein LOC100256155 [Vitis vinifera]
          Length = 208

 Score =  247 bits (630), Expect = 3e-63
 Identities = 124/198 (62%), Positives = 147/198 (74%)
 Frame = -3

Query: 840 SFPALLLMFLNFILFVLSFASFAPTFLLKNPPRSLGWALYXXXXXXXXXXXXGFCSQITH 661
           SF  LLL  LNFILF+LS AS APT LL+ PP SLGWA              GF SQ+TH
Sbjct: 11  SFLNLLLSCLNFILFILSSASLAPTILLRMPPTSLGWAFLMISCISLFSSFVGFYSQLTH 70

Query: 660 LCFITHVSLILASVVGQVLGVLALFTKENPSLRLLNSPRDPKEARVLVRVECGALMGMLM 481
            CFITHVSL+L+S +GQ+LG+LALFT+EN SL +L SPRD KEA++LVR+ECG LM M +
Sbjct: 71  FCFITHVSLLLSSSIGQLLGILALFTRENSSLSMLKSPRDMKEAKLLVRLECGILMAMFV 130

Query: 480 MQFAILILTCAVHTCWVKXXXXXXXXXXETAKKRSRNMARVQEESMANAAKTAEVRAKEF 301
           MQ  +LILTC +H+CWV+            A+KRSR +ARVQEESMANAAK AEV+AKEF
Sbjct: 131 MQVGVLILTCIIHSCWVREYEGLEAEREAAARKRSRRIARVQEESMANAAKIAEVKAKEF 190

Query: 300 DEKMKNKYGKWTKTEFEG 247
           DEKMKNKYG+W KT+FEG
Sbjct: 191 DEKMKNKYGQWVKTDFEG 208


>ref|XP_002330508.1| predicted protein [Populus trichocarpa] gi|222872442|gb|EEF09573.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  238 bits (608), Expect = 1e-60
 Identities = 122/202 (60%), Positives = 147/202 (72%), Gaps = 2/202 (0%)
 Frame = -3

Query: 846 SSSFPALLLMFLNFILFVLSFASFAPTFLLKNPPRSLGWALYXXXXXXXXXXXXGFCSQI 667
           S SFP+LLL  LNF LF+LS AS  P  LLK PP SLG+AL             GF SQ+
Sbjct: 9   SCSFPSLLLSCLNFTLFILSSASIVPIVLLKMPPTSLGFALLVGSCISLLSSFVGFYSQL 68

Query: 666 THLCFITHVSLILASVVGQVLGVLALFTKENPSLRLLNSPRDPKEARVLVRVECGALMGM 487
           TH+C ITHVSL+LAS+VGQVL +LALFT+E PSL +L S RDP+EA++LVR+ECG LM M
Sbjct: 69  THMCCITHVSLLLASLVGQVLSILALFTREKPSLAMLKSSRDPREAKLLVRLECGVLMAM 128

Query: 486 LMMQFAILILTCAVHTCWVKXXXXXXXXXXETAKKRSRNMARVQEESMANAAKTAEVRAK 307
           LMMQ  +L+L+CAVH CWV+           TAKKRSR +ARVQEESMAN AK  E++ K
Sbjct: 129 LMMQLVVLVLSCAVHNCWVREYEGLEAEREATAKKRSRRIARVQEESMANVAKIVEIKEK 188

Query: 306 EFDEKMKNKYG--KWTKTEFEG 247
           EFD+KMK+KYG  +W KT+FEG
Sbjct: 189 EFDDKMKSKYGHSQWVKTDFEG 210


>ref|NP_001236268.1| uncharacterized protein LOC100306012 [Glycine max]
           gi|255627275|gb|ACU13982.1| unknown [Glycine max]
          Length = 210

 Score =  237 bits (605), Expect = 2e-60
 Identities = 119/197 (60%), Positives = 145/197 (73%)
 Frame = -3

Query: 840 SFPALLLMFLNFILFVLSFASFAPTFLLKNPPRSLGWALYXXXXXXXXXXXXGFCSQITH 661
           SF  LLL  LNF +F+LS +SFAPT LLK PP S G AL             GF SQ+TH
Sbjct: 13  SFTNLLLSCLNFSIFILSASSFAPTILLKMPPTSFGMALLMVSGISLLSSFVGFYSQLTH 72

Query: 660 LCFITHVSLILASVVGQVLGVLALFTKENPSLRLLNSPRDPKEARVLVRVECGALMGMLM 481
            CF+TH+SL+LAS++GQVL +LALFTKE  S+ LL SPRDPKEA+VLVR+ECGALM M M
Sbjct: 73  FCFLTHISLLLASLIGQVLTILALFTKEKASMSLLKSPRDPKEAKVLVRLECGALMAMCM 132

Query: 480 MQFAILILTCAVHTCWVKXXXXXXXXXXETAKKRSRNMARVQEESMANAAKTAEVRAKEF 301
           +Q  +L+L+CAVH+CWVK           +A+KRSR +A VQEESMANA K AE++AKE 
Sbjct: 133 LQCVVLMLSCAVHSCWVKDYEELEAEKAASARKRSRRIAEVQEESMANATKMAEIKAKEL 192

Query: 300 DEKMKNKYGKWTKTEFE 250
           DEKMK+KYG+W KT+FE
Sbjct: 193 DEKMKSKYGQWVKTDFE 209


>gb|AFK47572.1| unknown [Lotus japonicus]
          Length = 208

 Score =  233 bits (595), Expect = 3e-59
 Identities = 121/197 (61%), Positives = 140/197 (71%)
 Frame = -3

Query: 840 SFPALLLMFLNFILFVLSFASFAPTFLLKNPPRSLGWALYXXXXXXXXXXXXGFCSQITH 661
           SF  LLL  LNF LF+LS ASFAPT LLK PP S G A              GF S +TH
Sbjct: 11  SFTTLLLCCLNFTLFILSAASFAPTILLKMPPTSFGMAFLMVSSISLLSSFIGFYSHLTH 70

Query: 660 LCFITHVSLILASVVGQVLGVLALFTKENPSLRLLNSPRDPKEARVLVRVECGALMGMLM 481
            CF+TH+SL LA + GQVL +LALFTKE  SL LL SPRDPKEA++LVRVECGALM M M
Sbjct: 71  FCFLTHISLTLAPLTGQVLAMLALFTKEKASLTLLKSPRDPKEAKLLVRVECGALMAMCM 130

Query: 480 MQFAILILTCAVHTCWVKXXXXXXXXXXETAKKRSRNMARVQEESMANAAKTAEVRAKEF 301
           +Q  +L+L+CAVH+C VK           +AKKRSR +ARVQEESMANA+K AEV+ KEF
Sbjct: 131 LQMVVLVLSCAVHSCLVKDYEGLEAEKEASAKKRSRRVARVQEESMANASKIAEVKDKEF 190

Query: 300 DEKMKNKYGKWTKTEFE 250
           DEKM +KYGKW KT+FE
Sbjct: 191 DEKMNSKYGKWVKTDFE 207


>emb|CBI27813.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  231 bits (590), Expect = 1e-58
 Identities = 118/190 (62%), Positives = 140/190 (73%)
 Frame = -3

Query: 840 SFPALLLMFLNFILFVLSFASFAPTFLLKNPPRSLGWALYXXXXXXXXXXXXGFCSQITH 661
           SF  LLL  LNFILF+LS AS APT LL+ PP SLGWA              GF SQ+TH
Sbjct: 80  SFLNLLLSCLNFILFILSSASLAPTILLRMPPTSLGWAFLMISCISLFSSFVGFYSQLTH 139

Query: 660 LCFITHVSLILASVVGQVLGVLALFTKENPSLRLLNSPRDPKEARVLVRVECGALMGMLM 481
            CFITHVSL+L+S +GQ+LG+LALFT+EN SL +L SPRD KEA++LVR+ECG LM M +
Sbjct: 140 FCFITHVSLLLSSSIGQLLGILALFTRENSSLSMLKSPRDMKEAKLLVRLECGILMAMFV 199

Query: 480 MQFAILILTCAVHTCWVKXXXXXXXXXXETAKKRSRNMARVQEESMANAAKTAEVRAKEF 301
           MQ  +LILTC +H+CWV+            A+KRSR +ARVQEESMANAAK AEV+AKEF
Sbjct: 200 MQVGVLILTCIIHSCWVREYEGLEAEREAAARKRSRRIARVQEESMANAAKIAEVKAKEF 259

Query: 300 DEKMKNKYGK 271
           DEKMKNKYG+
Sbjct: 260 DEKMKNKYGQ 269


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