BLASTX nr result

ID: Coptis25_contig00007701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007701
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus c...   114   2e-23
ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana] ...    89   6e-16
ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256...    89   1e-15
dbj|BAF00498.1| hypothetical protein [Arabidopsis thaliana]            89   1e-15

>ref|XP_002526938.1| hypothetical protein RCOM_0530890 [Ricinus communis]
           gi|223533690|gb|EEF35425.1| hypothetical protein
           RCOM_0530890 [Ricinus communis]
          Length = 180

 Score =  114 bits (284), Expect = 2e-23
 Identities = 64/144 (44%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAV 258
           T +  RPTNHSKFTGKC + +    ++HP+CKSKDK KGT K++S DV  N +L+SWR V
Sbjct: 43  TKVLPRPTNHSKFTGKCGKPRCNGCHMHPSCKSKDKTKGTQKLKSHDVLSNYRLMSWRVV 102

Query: 259 DSKRHQGLNYVGVSANEFLGQV--------VEVVEEAIGIDGPNEVDDD-EDSDGMSFCD 411
           D K   GLN+ G SA+  L  +         +  EE I  +  +  DDD +D D  S+CD
Sbjct: 103 DGK--PGLNFSGFSASRILDHMDDDERYVDDDDYEETIAANVDDGDDDDIDDGDDTSYCD 160

Query: 412 VGFVVEQLXXXXXXXXXWCLVGEL 483
           VGF+++Q+         WCLV EL
Sbjct: 161 VGFLLDQV----EGDEDWCLVAEL 180


>ref|XP_002300083.1| predicted protein [Populus trichocarpa] gi|222847341|gb|EEE84888.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 24/158 (15%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQ--KLVSWR 252
           T ++S+PTNHSKFTGKC + + +  ++ P CK+K K KG++K++S DV  N   + ++WR
Sbjct: 44  TKVSSKPTNHSKFTGKCGKPRCLECHLQPCCKAKHKTKGSHKVKSQDVLSNSNAQFIAWR 103

Query: 253 AVDSKRHQGLNYVGVSANEFLGQV--------VEVVEEAIGIDGPNEVDDD--------- 381
            V+ +   G N  G SA   L  +         + V+++   +    VDDD         
Sbjct: 104 VVNGR--HGSNLSGFSATGMLNHLASTGDHDHADEVDDSGHENDQEFVDDDDENYIGDGV 161

Query: 382 -----EDSDGMSFCDVGFVVEQLXXXXXXXXXWCLVGE 480
                E+ DGMS+CDVGF V+           WCLV E
Sbjct: 162 NIKNIEEEDGMSYCDVGFEVD----LAEGDEDWCLVAE 195


>ref|NP_198885.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758097|dbj|BAB08541.1| unnamed protein product
           [Arabidopsis thaliana] gi|94442475|gb|ABF19025.1|
           At5g40690 [Arabidopsis thaliana]
           gi|332007199|gb|AED94582.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 210

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 59/169 (34%), Positives = 83/169 (49%), Gaps = 34/169 (20%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAV 258
           T +TS+PTNHSKFTGKC +A+ +  ++HP  KSK K KG+ K+R++D  V  K+++W+  
Sbjct: 43  TKVTSKPTNHSKFTGKCGQARCLDCHMHPVTKSKAKTKGSSKVRTND--VTYKMLTWQVA 100

Query: 259 DSKRHQGLNYVGVSANEFLGQVVE----------------------VVEEAIGI------ 354
                 GL   G SA   L  + +                      VVEE + I      
Sbjct: 101 AGGPRPGLKLSGFSATGILDLMSDDYGYDHDYDYDEENEEEENRGSVVEEVVNIQSSDDG 160

Query: 355 -----DGPNEVDDDEDSDG-MSFCDVGFVVEQLXXXXXXXXXWCLVGEL 483
                +G N+ DDD D DG MSFCDVG ++  +         W LV E+
Sbjct: 161 GETEEEGSNDDDDDTDDDGRMSFCDVGMMM-MMDHVEEYDEGWYLVEEM 208


>ref|XP_002268221.1| PREDICTED: uncharacterized protein LOC100256024 [Vitis vinifera]
          Length = 218

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 64/182 (35%), Positives = 84/182 (46%), Gaps = 47/182 (25%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAV 258
           T ++S+PTNHSKFTG C R K +  ++ P CKSK K KGT K++  D+  N +L++WR V
Sbjct: 43  TKVSSKPTNHSKFTGACCRTKCLDCHLLPACKSKGKTKGTQKMKPRDMVSNHRLITWRLV 102

Query: 259 DSKRHQGLNYVGVSANEFL----------------------------------------- 315
           + K   GLN+ G+SA E L                                         
Sbjct: 103 EGK--PGLNFNGISATEVLDHLSREDFYDDQYYNDEDEDEVEACYDGHYDEEKIEDSGHA 160

Query: 316 ----GQVVEVVE-EAIGIDGPNEVDD-DEDSDGMSFCDVGFVVEQLXXXXXXXXXWCLVG 477
               G + E  E EA GI    E D+ D D D  SF +VGFV EQ+         WCLV 
Sbjct: 161 CPDDGPMAEEKEIEAGGIQISGESDECDVDDDDNSFYEVGFVWEQV----DGDEGWCLVR 216

Query: 478 EL 483
           E+
Sbjct: 217 EM 218


>dbj|BAF00498.1| hypothetical protein [Arabidopsis thaliana]
          Length = 210

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 58/169 (34%), Positives = 83/169 (49%), Gaps = 34/169 (20%)
 Frame = +1

Query: 79  TPLTSRPTNHSKFTGKCDRAKGIRYYVHPTCKSKDKGKGTYKIRSSDVAVNQKLVSWRAV 258
           T +TS+PTNHSKFTGKC +A+ +  ++HP  KSK K KG+ K+R++D  V  K+++W+  
Sbjct: 43  TKVTSKPTNHSKFTGKCGQARCLDCHMHPVTKSKAKTKGSSKVRTND--VTYKMLTWQVA 100

Query: 259 DSKRHQGLNYVGVSANEFLGQVVE----------------------VVEEAIGI------ 354
                 GL   G SA   L  + +                      VVEE + I      
Sbjct: 101 AGGPRPGLKLSGFSATGILDLMSDDYCYDHDYDYDEENEEEENRGSVVEEVVDIQSSDDG 160

Query: 355 -----DGPNEVDDDEDSDG-MSFCDVGFVVEQLXXXXXXXXXWCLVGEL 483
                +G N+ DDD D DG MSFCDVG ++  +         W L+ E+
Sbjct: 161 GETEEEGSNDDDDDTDDDGRMSFCDVGMMM-MMDHVEEYDEGWYLIEEM 208


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