BLASTX nr result

ID: Coptis25_contig00007690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007690
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242...   227   5e-57
ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245...   197   3e-48
ref|XP_002516905.1| conserved hypothetical protein [Ricinus comm...   195   2e-47
ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|2...   194   3e-47
ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784...   186   9e-45

>ref|XP_002272904.1| PREDICTED: uncharacterized protein LOC100242678 [Vitis vinifera]
          Length = 291

 Score =  227 bits (578), Expect = 5e-57
 Identities = 114/169 (67%), Positives = 134/169 (79%), Gaps = 3/169 (1%)
 Frame = +2

Query: 92  MEYRPLEITVISAKDIKDVNLFSKMDVYALVTISGDRRTQQKTPVDRDGGKNPSWNFNMK 271
           MEYR LEI VISAKD+KDVNL SKMDVY +V+I+GD R++QKTPVDRDGG NP+WNF MK
Sbjct: 1   MEYRTLEINVISAKDLKDVNLISKMDVYVVVSINGDSRSKQKTPVDRDGGTNPTWNFPMK 60

Query: 272 FTIDENLAKQNRLILVFQLRCERSLGDRDIGEVHVPIKELLDNLGDGKSSQFVSYQVRKP 451
           FT+DE+ A+QNRL L F+LRCER+LGD+DIGEV+VPIKELLD  G+ K  QFVSYQVRKP
Sbjct: 61  FTVDESAAQQNRLTLSFKLRCERTLGDKDIGEVNVPIKELLDPAGESKPIQFVSYQVRKP 120

Query: 452 DGKAKGELSFSYKFGEKVFGEAKMSDQQ---VYPPPQAYKPGKEDEPVT 589
            GK KGEL+ SYKFGEK   ++    Q+    YPP  +  P K DEPVT
Sbjct: 121 SGKPKGELNLSYKFGEKSMSQSATKAQEPVMAYPPAASVVP-KADEPVT 168


>ref|XP_002283998.1| PREDICTED: uncharacterized protein LOC100245905 [Vitis vinifera]
           gi|147811137|emb|CAN76879.1| hypothetical protein
           VITISV_036709 [Vitis vinifera]
           gi|296089679|emb|CBI39498.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  197 bits (502), Expect = 3e-48
 Identities = 100/156 (64%), Positives = 119/156 (76%)
 Frame = +2

Query: 92  MEYRPLEITVISAKDIKDVNLFSKMDVYALVTISGDRRTQQKTPVDRDGGKNPSWNFNMK 271
           MEYR L+I V+ AKD+KDVNLFSKMDVY +VTISGD RT QKTPVD+DGG +P WNF+MK
Sbjct: 1   MEYRALDIKVLEAKDLKDVNLFSKMDVYVVVTISGDPRTVQKTPVDKDGGTSPKWNFSMK 60

Query: 272 FTIDENLAKQNRLILVFQLRCERSLGDRDIGEVHVPIKELLDNLGDGKSSQFVSYQVRKP 451
           FT+D+ LA QNR+ L F LR  R+LGDRDIGEV+VP+KELLDN  D K  + VS+QVRK 
Sbjct: 61  FTVDDALAHQNRIGLNFTLRSNRALGDRDIGEVYVPLKELLDNASDDKVDRVVSFQVRKQ 120

Query: 452 DGKAKGELSFSYKFGEKVFGEAKMSDQQVYPPPQAY 559
            GK +G LSFSYKFGEK F     + ++   P  AY
Sbjct: 121 SGKPQGTLSFSYKFGEK-FSAPAPAARKADDPVMAY 155


>ref|XP_002516905.1| conserved hypothetical protein [Ricinus communis]
           gi|223543993|gb|EEF45519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  195 bits (496), Expect = 2e-47
 Identities = 105/162 (64%), Positives = 126/162 (77%), Gaps = 6/162 (3%)
 Frame = +2

Query: 92  MEYRPLEITVISAKDIKDVNLFSKMDVYALVTISGDR---RTQQKTPVDRDGGKNPSWNF 262
           ME R LEI +ISAKD+KDVNLFSKMDVYA+++ISGD    + + KTPVD DGG NP+WNF
Sbjct: 1   MEQRTLEIKLISAKDLKDVNLFSKMDVYAVLSISGDSQQPKQKTKTPVDHDGGINPTWNF 60

Query: 263 NMKFTIDENLAKQNRLILVFQLRCERSLGDRDIGEVHVPIKELLDNL-GDGKSSQFVSYQ 439
             KF I E  A+QNRL L  +LRCER+LGD+D+GEVHVPIKELLD++ GDG S QFV+YQ
Sbjct: 61  PAKFIIIETPAQQNRLNLDIKLRCERALGDKDVGEVHVPIKELLDSINGDGNSMQFVNYQ 120

Query: 440 VRKPDGKAKGELSFSYKFGEKVF--GEAKMSDQQVYPPPQAY 559
           VRKP GK+KGELSFS+KF +K+   G  K SD +V  P  AY
Sbjct: 121 VRKPSGKSKGELSFSFKFSDKIVASGSEKASD-KVDQPITAY 161


>ref|XP_002315561.1| predicted protein [Populus trichocarpa] gi|222864601|gb|EEF01732.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  194 bits (494), Expect = 3e-47
 Identities = 97/141 (68%), Positives = 115/141 (81%), Gaps = 5/141 (3%)
 Frame = +2

Query: 92  MEYRPLEITVISAKDIKDVNLFSKMDVYALVTISGDRRTQQ-----KTPVDRDGGKNPSW 256
           M+ R LEI VISA+D+KDVN  SKMDVYA+V+ISG    QQ     KTPVDRDGGKNP+W
Sbjct: 1   MDQRTLEINVISARDLKDVNYISKMDVYAVVSISGVDSKQQPKQKTKTPVDRDGGKNPTW 60

Query: 257 NFNMKFTIDENLAKQNRLILVFQLRCERSLGDRDIGEVHVPIKELLDNLGDGKSSQFVSY 436
           NF +KFTI E    +N L LVF+L+CER+LGD+DIGEV+VPIKELLD+ GDGKS +FVSY
Sbjct: 61  NFPIKFTIPETSLAENHLSLVFKLKCERALGDKDIGEVNVPIKELLDSAGDGKSMKFVSY 120

Query: 437 QVRKPDGKAKGELSFSYKFGE 499
           QVRKP GK KGE++FS+KFGE
Sbjct: 121 QVRKPSGKPKGEINFSFKFGE 141


>ref|XP_003529574.1| PREDICTED: uncharacterized protein LOC100784458 [Glycine max]
          Length = 290

 Score =  186 bits (472), Expect = 9e-45
 Identities = 95/167 (56%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
 Frame = +2

Query: 92  MEYRPLEITVISAKDIKDVNLFSKMDVYALVTISGDRRTQQKTPVDRDGGKNPSWNFNMK 271
           ME+R LE+ + SAKD+KD+N+FSKMDVYA++++SGD++T  KTPV R+GG NP+WNF +K
Sbjct: 1   MEHRTLELNLASAKDLKDLNIFSKMDVYAVLSLSGDQKT--KTPVHRNGGTNPTWNFPVK 58

Query: 272 FTIDENLAKQNRLILVFQLRCERSLG-DRDIGEVHVPIKELLDNLGDGKSSQFVSYQVRK 448
           FT DE++A+QNRL L  ++R ER+L  D+DIG+VHVP+ ELL   GDGKS Q VSYQVRK
Sbjct: 59  FTFDESVARQNRLALEIKIRSERALATDKDIGQVHVPLMELLKQPGDGKSFQHVSYQVRK 118

Query: 449 PDGKAKGELSFSYKFGEKVFGEAKMSDQQVYPPPQAYKPGKEDEPVT 589
           P GK KG L+FSYKFG++    AK+S       P    P  + +PVT
Sbjct: 119 PSGKPKGALNFSYKFGDEFAAPAKVS------APAPTSPSHKVDPVT 159


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