BLASTX nr result

ID: Coptis25_contig00007683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007683
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565062.1| PREDICTED: WD repeat-containing protein wat1...    60   1e-07
dbj|BAJ88427.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   1e-07
dbj|BAJ93829.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   1e-07
ref|XP_002449784.1| hypothetical protein SORBIDRAFT_05g023230 [S...    60   1e-07
ref|NP_001130601.1| uncharacterized protein LOC100191700 [Zea ma...    60   1e-07

>ref|XP_003565062.1| PREDICTED: WD repeat-containing protein wat1-like [Brachypodium
           distachyon]
          Length = 316

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   ATGETIRVYQGHHKASVCCTLHDGAESSPS 91
           +TGE IRVYQGHHKA+VCC LHDGAES+PS
Sbjct: 287 STGEAIRVYQGHHKATVCCALHDGAESAPS 316


>dbj|BAJ88427.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 316

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   ATGETIRVYQGHHKASVCCTLHDGAESSPS 91
           +TGE IRVYQGHHKA+VCC LHDGAES+PS
Sbjct: 287 STGEAIRVYQGHHKATVCCALHDGAESAPS 316


>dbj|BAJ93829.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 188

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   ATGETIRVYQGHHKASVCCTLHDGAESSPS 91
           +TGE IRVYQGHHKA+VCC LHDGAES+PS
Sbjct: 159 STGEAIRVYQGHHKATVCCALHDGAESAPS 188


>ref|XP_002449784.1| hypothetical protein SORBIDRAFT_05g023230 [Sorghum bicolor]
           gi|241935627|gb|EES08772.1| hypothetical protein
           SORBIDRAFT_05g023230 [Sorghum bicolor]
          Length = 316

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   ATGETIRVYQGHHKASVCCTLHDGAESSPS 91
           +TGE IRVYQGHHKA+VCC LHDGAES+PS
Sbjct: 287 STGEAIRVYQGHHKATVCCALHDGAESAPS 316


>ref|NP_001130601.1| uncharacterized protein LOC100191700 [Zea mays]
           gi|194689600|gb|ACF78884.1| unknown [Zea mays]
           gi|195636382|gb|ACG37659.1| WD-repeat protein pop3 [Zea
           mays]
          Length = 316

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   ATGETIRVYQGHHKASVCCTLHDGAESSPS 91
           +TGE IRVYQGHHKA+VCC LHDGAES+PS
Sbjct: 287 STGEAIRVYQGHHKATVCCALHDGAESAPS 316


Top