BLASTX nr result
ID: Coptis25_contig00007682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007682 (853 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37174.3| unnamed protein product [Vitis vinifera] 67 4e-09 ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus c... 56 6e-09 emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera] 65 2e-08 ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|2... 63 7e-08 >emb|CBI37174.3| unnamed protein product [Vitis vinifera] Length = 527 Score = 67.4 bits (163), Expect = 4e-09 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%) Frame = -2 Query: 780 CMLVFLLSR------VS*VESCLDILAEVVTNTCKGISRDTVSEEQVVEFSAWNQWRSXX 619 C L LL R VS E LDIL++ + + + T S +Q+V+F W++WRS Sbjct: 281 CTLQELLKRQFAVLCVSSTEKGLDILSKTIRH-----NNWTESHDQLVDFITWSRWRSKN 335 Query: 618 XXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED 490 +SGA +IFSAPKVQW Q+FERL +S E D Sbjct: 336 LSYLLDKRTVRLVSGASMIFSAPKVQWAQLFERLNISGETRGD 378 >ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus communis] gi|223534117|gb|EEF35834.1| hypothetical protein RCOM_0542810 [Ricinus communis] Length = 406 Score = 56.2 bits (134), Expect(2) = 6e-09 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 38/130 (29%) Frame = -2 Query: 672 SEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHE 493 S +Q+ +F WN W+S ++GA +IFS PK+ W+QVFE++ S + E Sbjct: 265 SVDQLADFITWNCWKSVNLSYFLQKRTIRLVAGASMIFSGPKLSWVQVFEQMNASAKCKE 324 Query: 492 DLEMIVS-------------------------------------LIQIVYLEIETQFKGD 424 D ++ + L ++ EI+TQFKGD Sbjct: 325 DNDLCETIESGILEYLAGVLDGQLHQLWNLSPVLLAIAIPFWSPLFRLYLSEIQTQFKGD 384 Query: 423 TTI-RFCICI 397 +++ R C CI Sbjct: 385 SSVMRCCSCI 394 Score = 30.4 bits (67), Expect(2) = 6e-09 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = -1 Query: 322 RCCSCIKDGKKHIDC 278 RCCSCI++ K+H DC Sbjct: 389 RCCSCIQERKEHEDC 403 >emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera] Length = 335 Score = 65.1 bits (157), Expect = 2e-08 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 19/123 (15%) Frame = -2 Query: 780 CMLVFLLSR------VS*VESCLDILAEVV---------TNTCKGISRDTV--SEEQVVE 652 C L LL R VS E LDIL++ + +N+ K +++ T S + +V+ Sbjct: 173 CTLQELLKRQFAVLCVSSTEKGLDILSKTIRHNNWTESESNSFKKLNQVTSLPSHDXLVD 232 Query: 651 FSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED--LEMI 478 F W++WRS +SGA LIFSAPKVQW Q+FERL +S E D E I Sbjct: 233 FITWSRWRSXNLSYLLDKRTVRLVSGASLIFSAPKVQWAQLFERLNISGETRGDDYCETI 292 Query: 477 VSL 469 V L Sbjct: 293 VDL 295 >ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|222862064|gb|EEE99606.1| predicted protein [Populus trichocarpa] Length = 433 Score = 63.2 bits (152), Expect = 7e-08 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 16/115 (13%) Frame = -2 Query: 762 LSRVS*VESCLDILAEVVTNTCKGISRDTVSEEQV---------------VEFSAWNQWR 628 +S +S VE+ LD+L+ + + S ++ EEQ+ V+F WN W+ Sbjct: 207 VSCISTVETGLDVLSNAIRCSSGTESDSSMLEEQLKLDGAPSSVGEIEQPVDFFTWNHWK 266 Query: 627 SXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED-LEMIVSLI 466 S +SGA +IFSAPK+QWLQVFERL S + D L IV L+ Sbjct: 267 SKMVSYFLDKRTIRLVSGASMIFSAPKMQWLQVFERLNTSADCKNDGLSEIVELL 321