BLASTX nr result

ID: Coptis25_contig00007682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007682
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37174.3| unnamed protein product [Vitis vinifera]               67   4e-09
ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus c...    56   6e-09
emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera]    65   2e-08
ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|2...    63   7e-08

>emb|CBI37174.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
 Frame = -2

Query: 780 CMLVFLLSR------VS*VESCLDILAEVVTNTCKGISRDTVSEEQVVEFSAWNQWRSXX 619
           C L  LL R      VS  E  LDIL++ + +     +  T S +Q+V+F  W++WRS  
Sbjct: 281 CTLQELLKRQFAVLCVSSTEKGLDILSKTIRH-----NNWTESHDQLVDFITWSRWRSKN 335

Query: 618 XXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED 490
                       +SGA +IFSAPKVQW Q+FERL +S E   D
Sbjct: 336 LSYLLDKRTVRLVSGASMIFSAPKVQWAQLFERLNISGETRGD 378


>ref|XP_002526556.1| hypothetical protein RCOM_0542810 [Ricinus communis]
           gi|223534117|gb|EEF35834.1| hypothetical protein
           RCOM_0542810 [Ricinus communis]
          Length = 406

 Score = 56.2 bits (134), Expect(2) = 6e-09
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 38/130 (29%)
 Frame = -2

Query: 672 SEEQVVEFSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHE 493
           S +Q+ +F  WN W+S              ++GA +IFS PK+ W+QVFE++  S +  E
Sbjct: 265 SVDQLADFITWNCWKSVNLSYFLQKRTIRLVAGASMIFSGPKLSWVQVFEQMNASAKCKE 324

Query: 492 DLEMIVS-------------------------------------LIQIVYLEIETQFKGD 424
           D ++  +                                     L ++   EI+TQFKGD
Sbjct: 325 DNDLCETIESGILEYLAGVLDGQLHQLWNLSPVLLAIAIPFWSPLFRLYLSEIQTQFKGD 384

Query: 423 TTI-RFCICI 397
           +++ R C CI
Sbjct: 385 SSVMRCCSCI 394



 Score = 30.4 bits (67), Expect(2) = 6e-09
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -1

Query: 322 RCCSCIKDGKKHIDC 278
           RCCSCI++ K+H DC
Sbjct: 389 RCCSCIQERKEHEDC 403


>emb|CAN69928.1| hypothetical protein VITISV_018024 [Vitis vinifera]
          Length = 335

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
 Frame = -2

Query: 780 CMLVFLLSR------VS*VESCLDILAEVV---------TNTCKGISRDTV--SEEQVVE 652
           C L  LL R      VS  E  LDIL++ +         +N+ K +++ T   S + +V+
Sbjct: 173 CTLQELLKRQFAVLCVSSTEKGLDILSKTIRHNNWTESESNSFKKLNQVTSLPSHDXLVD 232

Query: 651 FSAWNQWRSXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED--LEMI 478
           F  W++WRS              +SGA LIFSAPKVQW Q+FERL +S E   D   E I
Sbjct: 233 FITWSRWRSXNLSYLLDKRTVRLVSGASLIFSAPKVQWAQLFERLNISGETRGDDYCETI 292

Query: 477 VSL 469
           V L
Sbjct: 293 VDL 295


>ref|XP_002321291.1| predicted protein [Populus trichocarpa] gi|222862064|gb|EEE99606.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
 Frame = -2

Query: 762 LSRVS*VESCLDILAEVVTNTCKGISRDTVSEEQV---------------VEFSAWNQWR 628
           +S +S VE+ LD+L+  +  +    S  ++ EEQ+               V+F  WN W+
Sbjct: 207 VSCISTVETGLDVLSNAIRCSSGTESDSSMLEEQLKLDGAPSSVGEIEQPVDFFTWNHWK 266

Query: 627 SXXXXXXXXXXXXXXLSGAKLIFSAPKVQWLQVFERLKVSNEAHED-LEMIVSLI 466
           S              +SGA +IFSAPK+QWLQVFERL  S +   D L  IV L+
Sbjct: 267 SKMVSYFLDKRTIRLVSGASMIFSAPKMQWLQVFERLNTSADCKNDGLSEIVELL 321


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