BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007680
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41
emb|CBI38862.3| unnamed protein product [Vitis vinifera]              170   4e-40
ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi...   163   6e-38
ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-35
ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2...   154   4e-35

>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  175 bits (444), Expect = 1e-41
 Identities = 94/147 (63%), Positives = 106/147 (72%)
 Frame = -1

Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738
           A+EIYAG EVYKALLRAYS   +  GAQRVFDAIQFA ISPDVKLCALLINA+RVAGQ+ 
Sbjct: 202 AKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQTQ 261

Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558
            A   FENMRR+GL P+DK +AL+LAAY                  D  VLGKE SE+L 
Sbjct: 262 KAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELLA 321

Query: 557 CWFRRLGVVDEVALVLKEYAAKEIKCE 477
            WF+RLGVV EV LVL+EY+AKE  CE
Sbjct: 322 AWFQRLGVVKEVELVLREYSAKEASCE 348


>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  170 bits (431), Expect = 4e-40
 Identities = 92/143 (64%), Positives = 104/143 (72%)
 Frame = -1

Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738
           A+EIYAG EVYKALLRAYS   +  GAQRVFDAIQFA ISPDVKLCALLINA+RVAGQ+ 
Sbjct: 202 AKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQTQ 261

Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558
            A   FENMRR+GL P+DK +AL+LAAY                  D  VLGKE SE+L 
Sbjct: 262 KAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELLA 321

Query: 557 CWFRRLGVVDEVALVLKEYAAKE 489
            WF+RLGVV EV LVL+EY+AKE
Sbjct: 322 AWFQRLGVVKEVELVLREYSAKE 344


>ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Cucumis sativus]
           gi|449480346|ref|XP_004155867.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g01970-like [Cucumis sativus]
          Length = 404

 Score =  163 bits (412), Expect = 6e-38
 Identities = 83/144 (57%), Positives = 104/144 (72%)
 Frame = -1

Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738
           A++IYAG+EVYKALLRAYS +GN  GAQRVFDAIQ A I+PD KLC LLINA+ +AGQS 
Sbjct: 259 AKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPDEKLCGLLINAYLMAGQSR 318

Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558
            A+  F+NMRRAG+ PSDKC+AL L+AY                  DN ++GKE S++L 
Sbjct: 319 EAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLIDLEKDNVMVGKEASKILA 378

Query: 557 CWFRRLGVVDEVALVLKEYAAKEI 486
            W +RLGVV+EV +VL+EY  KE+
Sbjct: 379 AWLKRLGVVEEVEIVLREYTEKEV 402


>ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Glycine max]
          Length = 356

 Score =  155 bits (391), Expect = 2e-35
 Identities = 80/144 (55%), Positives = 101/144 (70%)
 Frame = -1

Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738
           AQEI AG+E+YKALLRAYS +GN  GAQRVFDAIQ A I+PD K+C+LL+NA+ +AGQS 
Sbjct: 210 AQEILAGSEIYKALLRAYSMIGNAEGAQRVFDAIQLAGITPDDKICSLLVNAYAMAGQSQ 269

Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558
            A   FENMRRAG+ PSDKC+A +L AY                  D  ++G+E S VL 
Sbjct: 270 KALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLIDLERDGIMVGEEASAVLA 329

Query: 557 CWFRRLGVVDEVALVLKEYAAKEI 486
            WFR+LGVV+EV LVL+++A  E+
Sbjct: 330 KWFRKLGVVEEVELVLRDFAIIEV 353


>ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  154 bits (388), Expect = 4e-35
 Identities = 82/141 (58%), Positives = 98/141 (69%)
 Frame = -1

Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738
           AQEI AG+EVYKALLRAYS +G+  GAQRVFDAIQ A I PD + CA+L+NA+ +AGQS 
Sbjct: 266 AQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIPPDDRTCAVLLNAYGMAGQSQ 325

Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558
            A   FENM RAG+ P+D+CVAL+LAAY                  +  ++GKE SEVL 
Sbjct: 326 NAYATFENMWRAGIEPTDRCVALVLAAYEKENKLNQALDFLIGLEREKLIIGKEASEVLA 385

Query: 557 CWFRRLGVVDEVALVLKEYAA 495
            WF RLGVV EV LVL+EYAA
Sbjct: 386 EWFGRLGVVKEVELVLREYAA 406