BLASTX nr result
ID: Coptis25_contig00007680
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007680 (917 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi... 175 1e-41 emb|CBI38862.3| unnamed protein product [Vitis vinifera] 170 4e-40 ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi... 163 6e-38 ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containi... 155 2e-35 ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2... 154 4e-35 >ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Vitis vinifera] Length = 352 Score = 175 bits (444), Expect = 1e-41 Identities = 94/147 (63%), Positives = 106/147 (72%) Frame = -1 Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738 A+EIYAG EVYKALLRAYS + GAQRVFDAIQFA ISPDVKLCALLINA+RVAGQ+ Sbjct: 202 AKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQTQ 261 Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558 A FENMRR+GL P+DK +AL+LAAY D VLGKE SE+L Sbjct: 262 KAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELLA 321 Query: 557 CWFRRLGVVDEVALVLKEYAAKEIKCE 477 WF+RLGVV EV LVL+EY+AKE CE Sbjct: 322 AWFQRLGVVKEVELVLREYSAKEASCE 348 >emb|CBI38862.3| unnamed protein product [Vitis vinifera] Length = 353 Score = 170 bits (431), Expect = 4e-40 Identities = 92/143 (64%), Positives = 104/143 (72%) Frame = -1 Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738 A+EIYAG EVYKALLRAYS + GAQRVFDAIQFA ISPDVKLCALLINA+RVAGQ+ Sbjct: 202 AKEIYAGREVYKALLRAYSNTSDAEGAQRVFDAIQFAGISPDVKLCALLINAYRVAGQTQ 261 Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558 A FENMRR+GL P+DK +AL+LAAY D VLGKE SE+L Sbjct: 262 KAHVAFENMRRSGLKPNDKSIALMLAAYEKENKLNKALDFLIDLERDGIVLGKEASELLA 321 Query: 557 CWFRRLGVVDEVALVLKEYAAKE 489 WF+RLGVV EV LVL+EY+AKE Sbjct: 322 AWFQRLGVVKEVELVLREYSAKE 344 >ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Cucumis sativus] gi|449480346|ref|XP_004155867.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Cucumis sativus] Length = 404 Score = 163 bits (412), Expect = 6e-38 Identities = 83/144 (57%), Positives = 104/144 (72%) Frame = -1 Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738 A++IYAG+EVYKALLRAYS +GN GAQRVFDAIQ A I+PD KLC LLINA+ +AGQS Sbjct: 259 AKDIYAGSEVYKALLRAYSMVGNAEGAQRVFDAIQLAAITPDEKLCGLLINAYLMAGQSR 318 Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558 A+ F+NMRRAG+ PSDKC+AL L+AY DN ++GKE S++L Sbjct: 319 EAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNSALELLIDLEKDNVMVGKEASKILA 378 Query: 557 CWFRRLGVVDEVALVLKEYAAKEI 486 W +RLGVV+EV +VL+EY KE+ Sbjct: 379 AWLKRLGVVEEVEIVLREYTEKEV 402 >ref|XP_003533639.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Glycine max] Length = 356 Score = 155 bits (391), Expect = 2e-35 Identities = 80/144 (55%), Positives = 101/144 (70%) Frame = -1 Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738 AQEI AG+E+YKALLRAYS +GN GAQRVFDAIQ A I+PD K+C+LL+NA+ +AGQS Sbjct: 210 AQEILAGSEIYKALLRAYSMIGNAEGAQRVFDAIQLAGITPDDKICSLLVNAYAMAGQSQ 269 Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558 A FENMRRAG+ PSDKC+A +L AY D ++G+E S VL Sbjct: 270 KALIAFENMRRAGIKPSDKCIASVLVAYEKESKINTALEFLIDLERDGIMVGEEASAVLA 329 Query: 557 CWFRRLGVVDEVALVLKEYAAKEI 486 WFR+LGVV+EV LVL+++A E+ Sbjct: 330 KWFRKLGVVEEVELVLRDFAIIEV 353 >ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa] Length = 407 Score = 154 bits (388), Expect = 4e-35 Identities = 82/141 (58%), Positives = 98/141 (69%) Frame = -1 Query: 917 AQEIYAGTEVYKALLRAYSTLGNTLGAQRVFDAIQFARISPDVKLCALLINAHRVAGQSD 738 AQEI AG+EVYKALLRAYS +G+ GAQRVFDAIQ A I PD + CA+L+NA+ +AGQS Sbjct: 266 AQEIRAGSEVYKALLRAYSIIGDADGAQRVFDAIQLAGIPPDDRTCAVLLNAYGMAGQSQ 325 Query: 737 GARRVFENMRRAGLTPSDKCVALILAAYXXXXXXXXXXXXXXXXXXDNFVLGKEGSEVLV 558 A FENM RAG+ P+D+CVAL+LAAY + ++GKE SEVL Sbjct: 326 NAYATFENMWRAGIEPTDRCVALVLAAYEKENKLNQALDFLIGLEREKLIIGKEASEVLA 385 Query: 557 CWFRRLGVVDEVALVLKEYAA 495 WF RLGVV EV LVL+EYAA Sbjct: 386 EWFGRLGVVKEVELVLREYAA 406