BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007678
         (1952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...   623   e-176
emb|CBI16387.3| unnamed protein product [Vitis vinifera]              610   e-172
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   602   e-170
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP...   570   e-160
ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi...   565   e-158

>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 447

 Score =  623 bits (1606), Expect = e-176
 Identities = 306/416 (73%), Positives = 340/416 (81%), Gaps = 1/416 (0%)
 Frame = +3

Query: 264  QPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNKITQQPEGYGFVEFASH 443
            QPT++EE+RTLWIGDLQYWV+ENYL++CFAHTGEV+SIKIIRNKIT QPEGYGFVEF SH
Sbjct: 33   QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSH 92

Query: 444  GAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 623
             AAER+LQ YNGT MPGT+Q FRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE
Sbjct: 93   AAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 152

Query: 624  TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEMNGVYCSSRPMRISAAT 803
            TFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+DEMERNRAM+EMNGVYCS+RPMRISAAT
Sbjct: 153  TFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT 212

Query: 804  PKKATGFQQPY-TAPKAVYPTPAFGTAAVQPFPAVDNDITNTTIFVGGLDPNVTEEELRQ 980
            PKK TGFQQ Y  A KA+YP PA+ T  +Q  PA DNDI NTTIFVG LDPNVTEEEL+Q
Sbjct: 213  PKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIFVGNLDPNVTEEELKQ 271

Query: 981  IFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQTVRLSWGRSMTAKQD 1160
            IF+QFG+LVY K   G+GCGFVQFGTR SAE AIQR+ GT+IGQ  VR+SWGRS TAKQD
Sbjct: 272  IFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQD 331

Query: 1161 QPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPXXXXXXXXXXXXXXXXXVEGMQEM 1340
             PG+W Q ADP+QWS                   DP                  EG+Q++
Sbjct: 332  LPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQQAEGVQDL 391

Query: 1341 VAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRPLWLKTSALYQQA 1508
             AMAGAVP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR LWLKTS   Q A
Sbjct: 392  AAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 447


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  610 bits (1573), Expect = e-172
 Identities = 303/416 (72%), Positives = 336/416 (80%), Gaps = 1/416 (0%)
 Frame = +3

Query: 264  QPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNKITQQPEGYGFVEFASH 443
            QPT++EE+RTLWIGDLQYWV+ENYL++CFAHTGEV+SIKIIRNKIT QPEGYGFVEF SH
Sbjct: 33   QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSH 92

Query: 444  GAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 623
             AAER+LQ YNGT MPGT+Q FRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE
Sbjct: 93   AAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 152

Query: 624  TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEMNGVYCSSRPMRISAAT 803
            TFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+DEMERNRAM+EMNGVYCS+RPMRISAAT
Sbjct: 153  TFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT 212

Query: 804  PKKATGFQQPY-TAPKAVYPTPAFGTAAVQPFPAVDNDITNTTIFVGGLDPNVTEEELRQ 980
            PKK TGFQQ Y  A KA+YP PA+ T  +Q  PA DNDI NTTIFVG LDPNVTEEEL+Q
Sbjct: 213  PKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIFVGNLDPNVTEEELKQ 271

Query: 981  IFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQTVRLSWGRSMTAKQD 1160
            IF+QFG+LVY K   G+GCGFVQFGTR SAE AIQR+ GT+IGQ  VR+SWGRS TAKQD
Sbjct: 272  IFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQD 331

Query: 1161 QPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPXXXXXXXXXXXXXXXXXVEGMQEM 1340
             PG+W Q ADP+QWS                   DP                  +    +
Sbjct: 332  LPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQ--QARYYL 389

Query: 1341 VAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRPLWLKTSALYQQA 1508
             AMAGAVP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR LWLKTS   Q A
Sbjct: 390  AAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 445


>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 438

 Score =  602 bits (1553), Expect = e-170
 Identities = 301/416 (72%), Positives = 334/416 (80%), Gaps = 1/416 (0%)
 Frame = +3

Query: 264  QPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNKITQQPEGYGFVEFASH 443
            QPT++EE+RTLWIGDLQYWV+ENYL++CFAHTGEV+SIKIIRNKIT QPEGYGFVEF SH
Sbjct: 33   QPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSH 92

Query: 444  GAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 623
             AAER+LQ YNGT MPGT+Q FRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE
Sbjct: 93   AAAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQE 152

Query: 624  TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEMNGVYCSSRPMRISAAT 803
            TFRAQYPSVRGAKVVTDPNTGR+KGYGFVKF+DEMERNRAM+EMNGVYCS+RPMRISAAT
Sbjct: 153  TFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAAT 212

Query: 804  PKKATGFQQPY-TAPKAVYPTPAFGTAAVQPFPAVDNDITNTTIFVGGLDPNVTEEELRQ 980
            PKK TGFQQ Y  A KA+YP PA+ T  +Q  PA DNDI NTTIFVG LDPNVTEEEL+Q
Sbjct: 213  PKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA-DNDINNTTIFVGNLDPNVTEEELKQ 271

Query: 981  IFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQTVRLSWGRSMTAKQD 1160
            IF+QFG+LVY K   G+GCGFVQFGTR SAE AIQR+ GT+IGQ  VR+SWGRS TAKQ 
Sbjct: 272  IFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQ- 330

Query: 1161 QPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPXXXXXXXXXXXXXXXXXVEGMQEM 1340
                    ADP+QWS                   DP                  EG+Q++
Sbjct: 331  --------ADPSQWSSAYYGYGQGYDAYPYGATQDPSLYAYGAYAGYLQYPQQAEGVQDL 382

Query: 1341 VAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRPLWLKTSALYQQA 1508
             AMAGAVP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR LWLKTS   Q A
Sbjct: 383  AAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRSLWLKTSPFSQMA 438


>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
            sativus]
          Length = 422

 Score =  570 bits (1468), Expect = e-160
 Identities = 294/430 (68%), Positives = 326/430 (75%)
 Frame = +3

Query: 216  ATWSVPPTSNYNHHNYQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNK 395
            AT +  PT    HH  QPTT+EE+RTLWIGDLQYWV+E+YLN+CFAHTGEV+SIKIIRNK
Sbjct: 2    ATLAGQPT----HH--QPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNK 55

Query: 396  ITQQPEGYGFVEFASHGAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSI 575
            IT QPEGYGFVEF SH AAER+LQTYNGT MPGT+Q FRLNWASFGIGERRPDAGPEHSI
Sbjct: 56   ITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSI 115

Query: 576  FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEM 755
            FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE ERNRAMSEM
Sbjct: 116  FVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEM 175

Query: 756  NGVYCSSRPMRISAATPKKATGFQQPYTAPKAVYPTPAFGTAAVQPFPAVDNDITNTTIF 935
            NGVYCS+RPMRISAATPKK  G QQ Y+  KA+YP PA+ T +V   PA D D  NTTIF
Sbjct: 176  NGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAY-TTSVPVLPA-DYDANNTTIF 233

Query: 936  VGGLDPNVTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQ 1115
            VG LDPN+TEEEL+Q F QFG++ Y K   GKGCGFVQFGTR SAE AIQ++ G +IGQQ
Sbjct: 234  VGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQ 293

Query: 1116 TVRLSWGRSMTAKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPXXXXXXXXX 1295
             VR SWGR+  AKQD    W Q  DPNQWS                   DP         
Sbjct: 294  VVRTSWGRNPAAKQDLT-TWGQQVDPNQWS-AYYGYGGTYDAYGYGVVQDPSLYGYGAYS 351

Query: 1296 XXXXXXXXVEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRPL 1475
                    V+G+Q++  +AGAVPSVEQ EE  D L TPDVD LN AYL+ H SA++G PL
Sbjct: 352  GYASYPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDCLNDAYLSKHESAILGWPL 411

Query: 1476 WLKTSALYQQ 1505
            WL TS+L +Q
Sbjct: 412  WLTTSSLVRQ 421


>ref|XP_003597428.1| RNA-binding protein [Medicago truncatula] gi|355486476|gb|AES67679.1|
            RNA-binding protein [Medicago truncatula]
          Length = 428

 Score =  565 bits (1456), Expect = e-158
 Identities = 284/426 (66%), Positives = 325/426 (76%), Gaps = 10/426 (2%)
 Frame = +3

Query: 261  YQPTTLEEIRTLWIGDLQYWVEENYLNTCFAHTGEVMSIKIIRNKITQQPEGYGFVEFAS 440
            +QP +LEE+RTLWIGDLQYWV+ENYL  CF+HTGEV+SIKIIRNKIT QPEGYGF+EF S
Sbjct: 6    HQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVS 65

Query: 441  HGAAERVLQTYNGTLMPGTDQPFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQ 620
            H AAERVLQTYNGT MPGT+Q FRLNWASFGIGERRPDAGP+HSIFVGDLAPDVTDYLLQ
Sbjct: 66   HSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQ 125

Query: 621  ETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMERNRAMSEMNGVYCSSRPMRISAA 800
            ETFR  Y SVRGAKVVTDPNTGRSKGYGFVKF+DE ERNRAMSEMNGVYCS+RPMRISAA
Sbjct: 126  ETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAA 185

Query: 801  TPKKATGFQQ-PYTA-------PKAVYPTPAFGTAAVQPFPAVDNDITNTTIFVGGLDPN 956
            TPKK TG+QQ PY A       PKA+YP PA+ TA V   P  + D+ NTTI+VG LD N
Sbjct: 186  TPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPP-EYDVNNTTIYVGNLDLN 244

Query: 957  VTEEELRQIFAQFGDLVYAKTIPGKGCGFVQFGTRQSAEAAIQRLNGTMIGQQTVRLSWG 1136
            V+EEEL+Q F QFG++V  K  PGK CGFVQFG R SAE AIQ++ G ++GQQ +R+SWG
Sbjct: 245  VSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWG 304

Query: 1137 RSMTAKQDQPGAWAQPADPNQWSXXXXXXXXXXXXXXXXXXPDPXXXXXXXXXXXXXXXX 1316
            R  TA+QD PG W Q  D +QWS                   DP                
Sbjct: 305  RPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYASYAQYPQ 364

Query: 1317 XVEGMQEMVAMAGAVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRPLWLKT--S 1490
             VEG Q++ AM  +VP++EQ+EELYDPLA PDVDKLN+AYL+VHG+A++GR LW KT  S
Sbjct: 365  QVEGAQDVSAM--SVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSS 422

Query: 1491 ALYQQA 1508
            +L QQA
Sbjct: 423  SLQQQA 428