BLASTX nr result

ID: Coptis25_contig00007669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007669
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267...    64   2e-10
emb|CBI37885.3| unnamed protein product [Vitis vinifera]               64   2e-10
gb|ACH87168.1| senescence-related protein [Camellia sinensis]          60   1e-09
ref|XP_002265289.1| PREDICTED: uncharacterized protein LOC100241...    61   8e-08
ref|XP_002529647.1| conserved hypothetical protein [Ricinus comm...    56   1e-07

>ref|XP_002278045.1| PREDICTED: uncharacterized protein LOC100267615 isoform 1 [Vitis
           vinifera]
          Length = 450

 Score = 63.5 bits (153), Expect(2) = 2e-10
 Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
 Frame = +3

Query: 282 TNLYPSLDMKELVDNLFPDNDNDVI---STVPVEQLLLTIPASIVHLIDKQHSVE 437
           ++LYPSL++KEL +NLFPD ++ V+   S+ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 37  SSLYPSLEVKELAENLFPDENDAVLQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 98  MTSHQTKNSTPLYPQVLQSNPDTT 169
           M+S+  +N   LYP+V  SNP+ T
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEAT 24


>emb|CBI37885.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 63.5 bits (153), Expect(2) = 2e-10
 Identities = 30/55 (54%), Positives = 44/55 (80%), Gaps = 3/55 (5%)
 Frame = +3

Query: 282 TNLYPSLDMKELVDNLFPDNDNDVI---STVPVEQLLLTIPASIVHLIDKQHSVE 437
           ++LYPSL++KEL +NLFPD ++ V+   S+ P E++L+ +  +IVHLIDKQHSVE
Sbjct: 37  SSLYPSLEVKELAENLFPDENDAVLQNPSSQPFEEVLVRVSGAIVHLIDKQHSVE 91



 Score = 26.2 bits (56), Expect(2) = 2e-10
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 98  MTSHQTKNSTPLYPQVLQSNPDTT 169
           M+S+  +N   LYP+V  SNP+ T
Sbjct: 1   MSSNPYRNPNSLYPEVDLSNPEAT 24


>gb|ACH87168.1| senescence-related protein [Camellia sinensis]
          Length = 448

 Score = 60.1 bits (144), Expect(2) = 1e-09
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +3

Query: 282 TNLYPSLDMKELVDNLFPDND----NDVISTVPVEQLLLTIPASIVHLIDKQHSVE 437
           + +YPS+DMK+L +NLFPDND    N        E++L+ +P +IVHLIDK+ SVE
Sbjct: 32  STIYPSIDMKDLAENLFPDNDSQNPNSQSQLESSEEILIRVPGTIVHLIDKEQSVE 87



 Score = 26.9 bits (58), Expect(2) = 1e-09
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 98  MTSHQTKNSTPLYPQVLQSNPD 163
           M+S   KNS  LYPQV QSNP+
Sbjct: 1   MSSQNPKNS--LYPQVDQSNPE 20


>ref|XP_002265289.1| PREDICTED: uncharacterized protein LOC100241964 [Vitis vinifera]
          Length = 437

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/52 (50%), Positives = 41/52 (78%)
 Frame = +3

Query: 282 TNLYPSLDMKELVDNLFPDNDNDVISTVPVEQLLLTIPASIVHLIDKQHSVE 437
           ++LYPS+DM++LV+NLFP+N +       +E++L+ +P  I+HLIDKQ+SVE
Sbjct: 35  SSLYPSIDMRDLVENLFPENPHPTAPPESLEEVLVMLPGVILHLIDKQYSVE 86


>ref|XP_002529647.1| conserved hypothetical protein [Ricinus communis]
           gi|223530873|gb|EEF32734.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 442

 Score = 56.2 bits (134), Expect(2) = 1e-07
 Identities = 28/60 (46%), Positives = 45/60 (75%), Gaps = 8/60 (13%)
 Frame = +3

Query: 282 TNLYPSLDMKELVDNLFPDND-----NDVISTVP---VEQLLLTIPASIVHLIDKQHSVE 437
           +NLYP++DMK+LV+NLFPD D     ++++ + P   +E+ L+ IP +I++LIDK +SVE
Sbjct: 32  SNLYPTIDMKDLVENLFPDLDEQQKNHNILPSAPPQALEEELIKIPGAILNLIDKNYSVE 91



 Score = 24.3 bits (51), Expect(2) = 1e-07
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 98  MTSHQTKNSTPLYPQVLQSNPDT 166
           M S        LYP+++Q+NP++
Sbjct: 1   MASQNPNPKQSLYPEIIQTNPES 23


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