BLASTX nr result

ID: Coptis25_contig00007654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007654
         (1761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530352.1| transcription factor, putative [Ricinus comm...   286   1e-74
ref|XP_003535128.1| PREDICTED: uncharacterized protein LOC100797...   248   3e-63
ref|XP_002308371.1| predicted protein [Populus trichocarpa] gi|2...   247   8e-63
ref|XP_002278675.1| PREDICTED: uncharacterized protein LOC100265...   243   9e-62
ref|XP_003518085.1| PREDICTED: uncharacterized protein LOC100780...   241   3e-61

>ref|XP_002530352.1| transcription factor, putative [Ricinus communis]
            gi|223530099|gb|EEF32013.1| transcription factor,
            putative [Ricinus communis]
          Length = 424

 Score =  286 bits (732), Expect = 1e-74
 Identities = 187/419 (44%), Positives = 254/419 (60%), Gaps = 22/419 (5%)
 Frame = -1

Query: 1326 DLPDCSTDNSGAWQPWNMGVRSPS----SAPVSQGGLQLTDYGSANPFKTASDHFDSQVS 1159
            DL   S  + G  Q WNMG+R+ S    SA + Q  L+  D  S++  ++    F+S  S
Sbjct: 21   DLALHSFQSFGNQQTWNMGIRAQSPVMESAHLQQQNLR-PDKSSSSIMRS----FESPAS 75

Query: 1158 VFNTAEHY-----YQLGTLPMFSQP-RKNFEPDIPLHRRFEDCLSVDT-DRGDDFSIQPR 1000
             F   E Y     Y      + S P  K+++  IP  +   +   +D  ++  D +++ R
Sbjct: 76   AFYATERYMGFPQYDCQVNAVLSCPYSKSYDSQIPSQQSSGEIYVIDAVNQQPDHNLELR 135

Query: 999  DTLQSVVKFR---DHNNQNPTQVDYQYRTPSRNLPGSELYLLRQNKVVGENTALKRKNPL 829
            + LQS+ K     DH  ++       Y+    N  G++L+ L QNK+   N A+   N  
Sbjct: 136  NNLQSITKSHLSDDHYYKS-------YKGVCSNSLGNKLHQLEQNKL-SRNGAVSVGNQF 187

Query: 828  -VPSEGNQNTGG----GISPFIHSLDQPSFHLNPEKQLSQTNSGVASITSASP---VSYR 673
             +P  G+Q+       G +PF+    Q       E Q  + +SGV S++SAS    ++  
Sbjct: 188  SIPFYGDQDHNNHNRFGSNPFV----QLGVSSRQEMQSPRFSSGVVSVSSASSGNSMATG 243

Query: 672  AAIPNKTRIRWTQDLHEKFVGCVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRI 493
            A + +KTRIRWTQDLHEKFV CVN LGGADKATPK ILKLMDSDGLTIFHVKSHLQKYRI
Sbjct: 244  AVLSSKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGLTIFHVKSHLQKYRI 303

Query: 492  AKYIPESVGVTGKPDKKVAMDDLSKLDQKTGLQITEALRLQLDVQMRLHEQLEIQRNLQL 313
            AKY+P+S    GK +K+ +++D+S++D KTGLQITEAL+LQLDVQ RLHEQLEIQ+NLQL
Sbjct: 304  AKYMPDSS--EGKAEKRTSINDVSQMDPKTGLQITEALQLQLDVQRRLHEQLEIQKNLQL 361

Query: 312  RIEEQGKQLKKMFDQQQETNKNLFETDNLDLLFPDLQSSTTGDASLDVSKNTNL*FSFP 136
            RIEEQG+QLK+MFDQQQ TN NLF   NLD + PD Q+ +  D  +  ++ ++    FP
Sbjct: 362  RIEEQGRQLKRMFDQQQRTNNNLFRNQNLDSISPDEQAFSLEDIEISFAEGSSNNSHFP 420


>ref|XP_003535128.1| PREDICTED: uncharacterized protein LOC100797195 [Glycine max]
          Length = 672

 Score =  248 bits (634), Expect = 3e-63
 Identities = 164/386 (42%), Positives = 221/386 (57%), Gaps = 13/386 (3%)
 Frame = -1

Query: 1341 GCYSFDLPDCSTDNSGAWQPWNMGVRSPSSAPVSQGGL-QLTDYGSANPFKTASDHFDSQ 1165
            G ++ +  +CS+      Q  NMG  +   A  S GG+ Q  + G      +    F+S 
Sbjct: 21   GDWNSEFGNCSSQYFDMRQASNMGTSNQPLAMASGGGVEQEPNIGQTKSSSSIISRFESP 80

Query: 1164 VSVFNTAE--------HYYQLGT-LPMFSQPRKNFEPDIPLHRRFEDCL---SVDTDRGD 1021
             S F   E        +  Q+G  L + SQ  K    + PL++     L   S+      
Sbjct: 81   ASAFYATEMCMGGFPQYDSQIGNNLSLMSQSSKFSNMEFPLYQSPRQSLFMASLANQPPP 140

Query: 1020 DFSIQPRDTLQSVVKFRDHNNQNPTQVDYQYRTPSRNLPGSELYLLRQNKVVGENTALKR 841
            +F +   + LQ ++K   +++Q     +   + P  + PGS    + Q+K   ++     
Sbjct: 141  NFDLS--NPLQEILKSHLNSDQCVRSPEDSNKIPYGDFPGSNFLPIEQHKFFIDDAISTG 198

Query: 840  KNPLVPSEGNQNTGGGISPFIHSLDQPSFHLNPEKQLSQTNSGVASITSASPVSYRAAIP 661
             +P +PS+GNQ+      PF     Q SF  + ++ LS T S   S TS +  S    + 
Sbjct: 199  ISPSIPSKGNQDQSVSCGPFNLPSAQLSFS-SQQEMLSPTGS--MSTTSGNSNSNGPVVS 255

Query: 660  NKTRIRWTQDLHEKFVGCVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRIAKYI 481
            +KTRIRWTQ+LHEKFV CVN LGGA+KATPK IL+LMDSDGLTIFHVKSHLQKYRIAK++
Sbjct: 256  SKTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMDSDGLTIFHVKSHLQKYRIAKFM 315

Query: 480  PESVGVTGKPDKKVAMDDLSKLDQKTGLQITEALRLQLDVQMRLHEQLEIQRNLQLRIEE 301
            P+     GK DK+  ++++  LD KTGLQI EAL+LQLDVQ RLHEQLEIQR LQLRIEE
Sbjct: 316  PQP--TQGKSDKRTNVENV-HLDVKTGLQIKEALQLQLDVQRRLHEQLEIQRKLQLRIEE 372

Query: 300  QGKQLKKMFDQQQETNKNLFETDNLD 223
            QGKQLK MFDQQQ+T+     T+N D
Sbjct: 373  QGKQLKMMFDQQQKTSNGHLITENND 398



 Score =  120 bits (300), Expect = 2e-24
 Identities = 62/132 (46%), Positives = 88/132 (66%)
 Frame = -1

Query: 657 KTRIRWTQDLHEKFVGCVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRIAKYIP 478
           K RI+WT+DLHE+FV  VN LGG  KA PK +L++M+S  LTIFHVKSHLQKYR   Y+ 
Sbjct: 530 KNRIKWTKDLHEQFVVAVNSLGGPQKAKPKAVLQMMNSKLLTIFHVKSHLQKYRTTMYMQ 589

Query: 477 ESVGVTGKPDKKVAMDDLSKLDQKTGLQITEALRLQLDVQMRLHEQLEIQRNLQLRIEEQ 298
            +     K  +    D +++L QK  +Q+ E+  LQL+++  + EQL+ QRNLQ+ +EEQ
Sbjct: 590 NTTKEGYKESQ--GRDMVTELQQKIYMQLEESRLLQLEIERGIQEQLKAQRNLQMLVEEQ 647

Query: 297 GKQLKKMFDQQQ 262
            +Q+  +  Q Q
Sbjct: 648 KEQVNSVTGQNQ 659


>ref|XP_002308371.1| predicted protein [Populus trichocarpa] gi|222854347|gb|EEE91894.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  247 bits (630), Expect = 8e-63
 Identities = 168/405 (41%), Positives = 222/405 (54%), Gaps = 8/405 (1%)
 Frame = -1

Query: 1326 DLPDCSTDNSGAWQPWNMGVRSPSSAPVSQGGLQLTDYGSANPFKTASDHFDSQVSVFNT 1147
            D  + S+   G  Q  NM  R   +  V + G Q  +      F +    F+S  S F  
Sbjct: 22   DFVNLSSQYFGNQQIRNMAPRLQPA--VMEAGCQQQNISPERSFSSIMSRFESPASSFYA 79

Query: 1146 AEHYY-------QLGTLPMFSQPRKNFEPDIPLHRRFEDCLSVDTDRGDDFSIQPRDTLQ 988
             E          Q+G+    SQ  K+++     H+  +   S++     D +     TL+
Sbjct: 80   TERCMRFPQYDCQVGS-SFCSQYSKSYDS----HQSSDPNYSINLGEQADHNFGLNSTLE 134

Query: 987  SVVKFRDHNNQNPTQVDYQYRTPSRNLPGSELYLLRQNKVVG-ENTALKRKNPLVPSEGN 811
            SVVK       +  + D    + S    G++L   + NK +    T     N  VP +GN
Sbjct: 135  SVVKPHYSYYNSFDKSDKGLSSSS----GNKLPSQQHNKFLDIHGTVSLGNNFSVPFQGN 190

Query: 810  QNTGGGISPFIHSLDQPSFHLNPEKQLSQTNSGVASITSASPVSYRAAIPNKTRIRWTQD 631
            Q+   G +P+       SF+    KQ  + + G        P S    + +KTRIRWTQD
Sbjct: 191  QDRQVGCNPYSSPFAGQSFNSLEGKQSPRFSLG------GGPTSSGKDLSSKTRIRWTQD 244

Query: 630  LHEKFVGCVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRIAKYIPESVGVTGKP 451
            LHEKFV CVN LGGA+KATPK IL LMDSDGLTIFHVKSHLQKYRIAKY+PE     GK 
Sbjct: 245  LHEKFVECVNRLGGAEKATPKAILNLMDSDGLTIFHVKSHLQKYRIAKYMPEP--SEGKA 302

Query: 450  DKKVAMDDLSKLDQKTGLQITEALRLQLDVQMRLHEQLEIQRNLQLRIEEQGKQLKKMFD 271
            +K+ +++D+S+LD KTG QI EAL+LQLDVQ RLHEQLEIQRNLQLRIEEQGKQLK MFD
Sbjct: 303  EKRNSINDVSQLDIKTGFQIREALQLQLDVQRRLHEQLEIQRNLQLRIEEQGKQLKMMFD 362

Query: 270  QQQETNKNLFETDNLDLLFPDLQSSTTGDASLDVSKNTNL*FSFP 136
            QQQ+T  +L    NLD+  PD  + +  D  + + + ++    FP
Sbjct: 363  QQQKTTNSLLNKQNLDITSPDEPAFSLEDIDVSILEGSDNNTQFP 407


>ref|XP_002278675.1| PREDICTED: uncharacterized protein LOC100265807 [Vitis vinifera]
          Length = 377

 Score =  243 bits (621), Expect = 9e-62
 Identities = 171/426 (40%), Positives = 226/426 (53%), Gaps = 26/426 (6%)
 Frame = -1

Query: 1359 MNTHKMGC-------------YSFDLPDCSTDNSGAWQPWNMGVRSPSSAPVSQGGLQLT 1219
            MNT K+ C             Y  +    S+   GAW   NMG+ S      + GG QL 
Sbjct: 1    MNTQKIDCQARIQQNHGVIPDYGIEFGPRSSQFLGAW---NMGICSQQPL-ATDGGSQLQ 56

Query: 1218 DYGSANPFKTASDHFDSQVSVFNTAEHY-------YQLGTLPMFSQPRKNFEPDIPLHRR 1060
              G A P  T    FDS  S F   E +       +Q     ++SQ   + +  +     
Sbjct: 57   TLGPAKPSSTIMSRFDSPASAFYATERFMGFSQYDHQASNPLLYSQSSTSCDSKL----- 111

Query: 1059 FEDCLSVDTDRGD--DFSIQPRDTLQSVVKFRDHNNQNPTQVDYQYRTPSRNLPGSELYL 886
              D  SVD++     D + Q R+T QSV++    +++NP  +                  
Sbjct: 112  --DNFSVDSNSTPPADPNFQFRNTFQSVMRA---SSENPNTIQC---------------- 150

Query: 885  LRQNKVVGENTALKRKNPLVPSEGNQNTGGGISPFIHSLDQPSFHLNPEKQLSQ----TN 718
                             P +P +GNQ+    +  +++         +P  Q +Q    ++
Sbjct: 151  -----------------PSIPFDGNQDIR--VCSYLYG--------SPLAQQAQCARSSS 183

Query: 717  SGVASITSASPVSYRAAIPNKTRIRWTQDLHEKFVGCVNCLGGADKATPKGILKLMDSDG 538
            SG  S+  A+PVS    + +K RIRWT DLHE+FV CVN LGGA+KATPK ILKLMDS+G
Sbjct: 184  SGGVSVAPANPVS--PILHSKARIRWTPDLHERFVECVNRLGGAEKATPKAILKLMDSEG 241

Query: 537  LTIFHVKSHLQKYRIAKYIPESVGVTGKPDKKVAMDDLSKLDQKTGLQITEALRLQLDVQ 358
            LTIFHVKSHLQKYRIAKY+PES    GK +K+ + +DL  LD KTG+Q  EAL++QLDVQ
Sbjct: 242  LTIFHVKSHLQKYRIAKYMPES--AEGKSEKRASTNDLPHLDNKTGMQFKEALQMQLDVQ 299

Query: 357  MRLHEQLEIQRNLQLRIEEQGKQLKKMFDQQQETNKNLFETDNLDLLFPDLQSSTTGDAS 178
             RLHEQLEIQRNLQLRIEEQG+QLK MF+QQQ+TN++  E D  DL   D+ S      S
Sbjct: 300  RRLHEQLEIQRNLQLRIEEQGRQLKMMFEQQQQTNRSFMEADE-DL---DIMSLEDPSTS 355

Query: 177  LDVSKN 160
            LD  +N
Sbjct: 356  LDQVEN 361


>ref|XP_003518085.1| PREDICTED: uncharacterized protein LOC100780919 [Glycine max]
          Length = 507

 Score =  241 bits (616), Expect = 3e-61
 Identities = 158/385 (41%), Positives = 217/385 (56%), Gaps = 12/385 (3%)
 Frame = -1

Query: 1341 GCYSFDLPDCSTDNSGAWQPWNMGVRSPSSAPVSQGGLQLTDY-GSANPFKTASDHFDSQ 1165
            G ++ +  +CS+      Q  NMG  +   A  S GG++   + G      +    F S 
Sbjct: 20   GDWNSEFGNCSSQYFDVRQASNMGTCNQPLAMASGGGVEQEPHIGQNKSSSSIISRFKSP 79

Query: 1164 VSVFNTAE--------HYYQLGTLPMFSQPRKNFEPDIPLHRRFEDCL---SVDTDRGDD 1018
             S F   E        +  Q+G   + S   K  + + PL++     L   S+       
Sbjct: 80   ASAFYATEMCMGGFPQYDSQIGNPSLMSHSSKFNDMEFPLYQSLRQSLFMPSLANQPPPK 139

Query: 1017 FSIQPRDTLQSVVKFRDHNNQNPTQVDYQYRTPSRNLPGSELYLLRQNKVVGENTALKRK 838
            F +   + LQ ++KF  +++Q    ++   + P  + PGS    + Q+K+  ++ A   +
Sbjct: 140  FDLS--NPLQEMLKFHLNSDQCVRSLETFNKIPCGDFPGSNFLPIEQHKLFIDDAAPISR 197

Query: 837  NPLVPSEGNQNTGGGISPFIHSLDQPSFHLNPEKQLSQTNSGVASITSASPVSYRAAIPN 658
            +P +PS+GNQ        F     Q SF  + ++ LS T S      S +  S  + + +
Sbjct: 198  SPSIPSKGNQGQTVSCGSFNLPSAQLSFS-SQQEMLSPTGS--MPTNSGNSSSNGSVVSS 254

Query: 657  KTRIRWTQDLHEKFVGCVNCLGGADKATPKGILKLMDSDGLTIFHVKSHLQKYRIAKYIP 478
            KTRIRWTQ+LHEKFV CVN LGGA+KATPK IL+LMDSDGLTIF VKSHLQKYRIAK++P
Sbjct: 255  KTRIRWTQELHEKFVECVNRLGGAEKATPKAILRLMDSDGLTIFQVKSHLQKYRIAKFMP 314

Query: 477  ESVGVTGKPDKKVAMDDLSKLDQKTGLQITEALRLQLDVQMRLHEQLEIQRNLQLRIEEQ 298
            +     GK DK+   +++  LD KTG QI EAL+LQLDVQ RLHEQLEIQR LQLRIEEQ
Sbjct: 315  QP--TQGKSDKRTNAENV-HLDVKTGFQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQ 371

Query: 297  GKQLKKMFDQQQETNKNLFETDNLD 223
            GKQLK MFDQQQ+T  +   T+N D
Sbjct: 372  GKQLKMMFDQQQKTTDSHLITENSD 396


Top