BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007652
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [...   271   3e-70
ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-l...   268   2e-69
ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [...   263   8e-68
ref|XP_002512880.1| protein with unknown function [Ricinus commu...   261   3e-67
ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycin...   254   3e-65

>ref|XP_002273840.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
            gi|296082301|emb|CBI21306.3| unnamed protein product
            [Vitis vinifera]
          Length = 305

 Score =  271 bits (692), Expect = 3e-70
 Identities = 146/251 (58%), Positives = 182/251 (72%), Gaps = 5/251 (1%)
 Frame = -1

Query: 1113 VVGQDHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQ 934
            VV  D S+A+K KA EIS  LKGTSIFLVG+N+ IK  +G +LAD LRYY+FDSDSLVE+
Sbjct: 78   VVDVDLSLAVKKKAMEISPVLKGTSIFLVGMNSTIKTNVGKLLADALRYYHFDSDSLVEE 137

Query: 933  AAGGEAAAKSFREKDDKGFLESEVWHLIKEYTVLQQCVIRVMLIWQTEVLRQLSSMGRLV 754
            A GGE+AAKS +E+D+KGF +SE                       TEVL+QLSSMGRLV
Sbjct: 138  ACGGESAAKSLKEQDEKGFHDSE-----------------------TEVLKQLSSMGRLV 174

Query: 753  ICTGDGAVKSSTNLSFMRHGISIWIDVPIVVLAKEVKESGNQPPPDDV-----ILNSDPS 589
            +C GDG V+SSTNL+ +RHGISIWIDVPI ++AK + E G Q P  ++        +  +
Sbjct: 175  VCAGDGLVQSSTNLALLRHGISIWIDVPIEMVAKNMIEEGVQIPVTELSTAESYSETGDN 234

Query: 588  KAVAKLTELFERMRGGYATADATISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRV 409
            +  A+L  ++E M+GGYATADA++SLQKVASQLGYDD DAVT EDMAME  +EI++LTR+
Sbjct: 235  QVFAQLAVVYEEMKGGYATADASVSLQKVASQLGYDDLDAVTTEDMAMEVLKEIQRLTRL 294

Query: 408  KKMMEAAARPF 376
            KKMME AARPF
Sbjct: 295  KKMMEEAARPF 305


>ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
            gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate
            kinase, chloroplastic-like [Cucumis sativus]
          Length = 307

 Score =  268 bits (684), Expect = 2e-69
 Identities = 137/250 (54%), Positives = 185/250 (74%)
 Frame = -1

Query: 1125 VDKNVVGQDHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDS 946
            V+  V   D S+ +K KA +++ +LKGTSIFLVGIN++IK KLG +LAD+LRYYYFDSDS
Sbjct: 81   VEAKVTVDDLSLEVKKKAMDVAPELKGTSIFLVGINSSIKTKLGKLLADVLRYYYFDSDS 140

Query: 945  LVEQAAGGEAAAKSFREKDDKGFLESEVWHLIKEYTVLQQCVIRVMLIWQTEVLRQLSSM 766
            LV + +GGEAAAK +++ D+KGF   E                       TEVL+QLSSM
Sbjct: 141  LVVEVSGGEAAAKLYKQSDEKGFQAFE-----------------------TEVLKQLSSM 177

Query: 765  GRLVICTGDGAVKSSTNLSFMRHGISIWIDVPIVVLAKEVKESGNQPPPDDVILNSDPSK 586
            GRLV+C G+GAV+SSTNL+ +RHGI++WID+P+ ++A+E  E  +Q P  D+  +   S+
Sbjct: 178  GRLVVCAGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDRSQHPVFDISTSGSYSE 237

Query: 585  AVAKLTELFERMRGGYATADATISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVK 406
             + ++T L+++++ GYATADA ISLQK+AS+LGYDD +AVT EDMAMEA +EIEKLTRVK
Sbjct: 238  VLGQITSLYQKVKDGYATADALISLQKLASKLGYDDFNAVTTEDMAMEALKEIEKLTRVK 297

Query: 405  KMMEAAARPF 376
            KM+EAAA+PF
Sbjct: 298  KMIEAAAKPF 307


>ref|XP_003518273.1| PREDICTED: shikimate kinase, chloroplastic [Glycine max]
          Length = 280

 Score =  263 bits (671), Expect = 8e-68
 Identities = 139/250 (55%), Positives = 177/250 (70%)
 Frame = -1

Query: 1125 VDKNVVGQDHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDS 946
            V  ++   D S+A+K KAAE+SS+LKGTSIFLVG+ +++K  LG +LAD LRYYYFDSDS
Sbjct: 54   VSSSLGATDSSLAVKKKAAEVSSELKGTSIFLVGLKSSLKTSLGKLLADALRYYYFDSDS 113

Query: 945  LVEQAAGGEAAAKSFREKDDKGFLESEVWHLIKEYTVLQQCVIRVMLIWQTEVLRQLSSM 766
            LVE+A GG  AAKSFRE D+KGF ESE                       TEVL+QLSSM
Sbjct: 114  LVEEAVGGALAAKSFRESDEKGFYESE-----------------------TEVLKQLSSM 150

Query: 765  GRLVICTGDGAVKSSTNLSFMRHGISIWIDVPIVVLAKEVKESGNQPPPDDVILNSDPSK 586
            GRLV+C G+G V SSTNL+ +RHGIS+WIDVP+  +A++V E  +Q  P ++ ++    +
Sbjct: 151  GRLVVCAGNGTVTSSTNLALLRHGISLWIDVPLDFVARDVIEDKSQFAPSEISISGSYPE 210

Query: 585  AVAKLTELFERMRGGYATADATISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVK 406
               +L  L+++ R GYATADA IS+QKV S+LG D+ D +T EDMA+EA REIEKLTRVK
Sbjct: 211  VQDELGALYDKYRVGYATADAIISVQKVVSRLGCDNLDEITREDMALEALREIEKLTRVK 270

Query: 405  KMMEAAARPF 376
            KM E AARPF
Sbjct: 271  KMQEEAARPF 280


>ref|XP_002512880.1| protein with unknown function [Ricinus communis]
            gi|223547891|gb|EEF49383.1| protein with unknown function
            [Ricinus communis]
          Length = 292

 Score =  261 bits (666), Expect = 3e-67
 Identities = 140/242 (57%), Positives = 173/242 (71%)
 Frame = -1

Query: 1101 DHSVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQAAGG 922
            D S+ALK +AA+IS +LKGTSIFLVG+ +++K  LG +LAD LRYYYFDSDSLVE+ A G
Sbjct: 81   DSSLALKKRAADISPELKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASG 140

Query: 921  EAAAKSFREKDDKGFLESEVWHLIKEYTVLQQCVIRVMLIWQTEVLRQLSSMGRLVICTG 742
             +AAKSF+E D+KGF ESE                       TEVL+QLSSMGRLV+C G
Sbjct: 141  ASAAKSFKETDEKGFRESE-----------------------TEVLKQLSSMGRLVVCAG 177

Query: 741  DGAVKSSTNLSFMRHGISIWIDVPIVVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTEL 562
            DGAV+S TNL+ +RHGIS+WIDVP+ ++A+ + E  +Q       L+   S+ + +L   
Sbjct: 178  DGAVQSFTNLALLRHGISLWIDVPLDMVAQAMSEESDQ-------LSGADSEELTELIAT 230

Query: 561  FERMRGGYATADATISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAAR 382
            FE MRGGYATADATISLQKVA  LGYD  D+VT EDM +E  +EIEKLTRVKKM+E AAR
Sbjct: 231  FEAMRGGYATADATISLQKVAVNLGYDALDSVTAEDMTLEVLKEIEKLTRVKKMLEEAAR 290

Query: 381  PF 376
            PF
Sbjct: 291  PF 292


>ref|NP_001239733.1| uncharacterized protein LOC100781076 [Glycine max]
            gi|255640183|gb|ACU20382.1| unknown [Glycine max]
          Length = 289

 Score =  254 bits (649), Expect = 3e-65
 Identities = 138/240 (57%), Positives = 173/240 (72%)
 Frame = -1

Query: 1095 SVALKNKAAEISSQLKGTSIFLVGINNNIKAKLGNVLADMLRYYYFDSDSLVEQAAGGEA 916
            S+A+K KAAE+SS+LKGTSIFLVG+ ++ K  LG +LAD LRYYYFDSD+LVE+A GG  
Sbjct: 75   SLAVKKKAAEVSSELKGTSIFLVGLKSSFKTSLGKLLADALRYYYFDSDNLVEEAVGGAL 134

Query: 915  AAKSFREKDDKGFLESEVWHLIKEYTVLQQCVIRVMLIWQTEVLRQLSSMGRLVICTGDG 736
            AAKSFRE D+KGF E E                       TEVL+QLSSMGRLV+C G+G
Sbjct: 135  AAKSFRESDEKGFYECE-----------------------TEVLKQLSSMGRLVVCAGNG 171

Query: 735  AVKSSTNLSFMRHGISIWIDVPIVVLAKEVKESGNQPPPDDVILNSDPSKAVAKLTELFE 556
            AV SSTNL+ +RHGIS+WIDVP+  +A++V E  +Q  P ++ ++   S    +L  L++
Sbjct: 172  AVTSSTNLALLRHGISLWIDVPLDFVARDVIEDQSQFAPSELSISG--SYPEDELGALYD 229

Query: 555  RMRGGYATADATISLQKVASQLGYDDTDAVTIEDMAMEAFREIEKLTRVKKMMEAAARPF 376
            R R GYATADA IS+QKVAS+LG D+ D +T EDMA+EA  EIEKLTRVKKM+E AARPF
Sbjct: 230  RYRVGYATADAIISVQKVASRLGCDNLDEITREDMALEALGEIEKLTRVKKMLEEAARPF 289