BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007644
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   199   2e-49
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   199   2e-49
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   171   4e-41
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   171   6e-41
gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   171   6e-41

>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  199 bits (506), Expect = 2e-49
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +2

Query: 65  MVYLKTYENKTQILNLNPKSTTLETLKELIEQKLNIPITHQRLFLSPKHLLGPKSTLISN 244
           MV++K+++NKT ILNLNPK+TT ETLK  IE++L IP++ QR+FL+P+ L+G +S LI+ 
Sbjct: 1   MVFVKSFDNKTLILNLNPKATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALIAE 60

Query: 245 LGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDIG 424
           LGV+ +S LTLH+PL GG  MQ P  PKP+LEFLN KPPPNYVAGLGRGATGFTTRSDIG
Sbjct: 61  LGVRSDSALTLHLPLFGG--MQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIG 118

Query: 425 PARAAPDLPDRSATTI 472
           PARAAPDLPDRSATTI
Sbjct: 119 PARAAPDLPDRSATTI 134


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  199 bits (506), Expect = 2e-49
 Identities = 97/136 (71%), Positives = 117/136 (86%)
 Frame = +2

Query: 65  MVYLKTYENKTQILNLNPKSTTLETLKELIEQKLNIPITHQRLFLSPKHLLGPKSTLISN 244
           MV++K+++NKT ILNLNPK+TT ETLK  IE++L IP++ QR+FL+P+ L+G +S LI+ 
Sbjct: 1   MVFVKSFDNKTLILNLNPKATTFETLKHQIERELGIPLSLQRIFLNPRRLIGDESALIAE 60

Query: 245 LGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDIG 424
           LGV+ +S LTLH+PL GG  MQ P  PKP+LEFLN KPPPNYVAGLGRGATGFTTRSDIG
Sbjct: 61  LGVRSDSALTLHLPLFGG--MQAPVVPKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIG 118

Query: 425 PARAAPDLPDRSATTI 472
           PARAAPDLPDRSATTI
Sbjct: 119 PARAAPDLPDRSATTI 134


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  171 bits (434), Expect = 4e-41
 Identities = 91/142 (64%), Positives = 106/142 (74%), Gaps = 6/142 (4%)
 Frame = +2

Query: 65  MVYLKTYENKTQILNLNPKSTTLETLKELIEQKLNIPITHQRLFLSPKHLL------GPK 226
           MV++ +  +KT  ++LNP +TTL  LK  I+Q L +PI+HQRLFLS    L         
Sbjct: 1   MVFIVSPNHKTFSIDLNPNTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDD 60

Query: 227 STLISNLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFT 406
           S LIS+LGV   STLTLH+P LGGT   PP  PKP+ +FLN+KPPPNYVAGLGRGATGFT
Sbjct: 61  SLLISDLGVGPYSTLTLHVPFLGGTN--PPAVPKPRFDFLNSKPPPNYVAGLGRGATGFT 118

Query: 407 TRSDIGPARAAPDLPDRSATTI 472
           TRSDIGPARAAPDLPDRSATTI
Sbjct: 119 TRSDIGPARAAPDLPDRSATTI 140


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
           gi|449514699|ref|XP_004164455.1| PREDICTED:
           pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/138 (65%), Positives = 104/138 (75%), Gaps = 2/138 (1%)
 Frame = +2

Query: 65  MVYLKTYENKTQILNLNPKSTTLETLKELIEQKLNIPITHQRLFLSPKHLLGP--KSTLI 238
           MV+L     KT  LNLNP +T++  LK  IE   +IPI+ QRLFLS    L     STL+
Sbjct: 1   MVFLSIPNQKTLFLNLNPSTTSILNLKRAIEDVSHIPISFQRLFLSQSFQLSHFNDSTLL 60

Query: 239 SNLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSD 418
           S+L +  NSTLTLH+PL GG  MQ P  PKP+L+FLN+KPPPNYVAGLGRGATGFTTRSD
Sbjct: 61  SHLRILPNSTLTLHVPLFGG--MQAPTIPKPRLDFLNSKPPPNYVAGLGRGATGFTTRSD 118

Query: 419 IGPARAAPDLPDRSATTI 472
           IGPARAAPDLPDRSATTI
Sbjct: 119 IGPARAAPDLPDRSATTI 136


>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  171 bits (433), Expect = 6e-41
 Identities = 92/137 (67%), Positives = 107/137 (78%), Gaps = 1/137 (0%)
 Frame = +2

Query: 65  MVYLKTYENKTQILNLNPKSTTLETLKELIEQKLNIPITHQRLFLSPKHLLGPKSTL-IS 241
           MV+LK+ +NKT  L+L+P +T+L+ L   IE+K  +P+T QRLFLS + L+G   T  IS
Sbjct: 1   MVFLKSPDNKTLTLHLDPTTTSLQALHLEIERKSGVPVTLQRLFLSSRRLIGGDGTATIS 60

Query: 242 NLGVQENSTLTLHIPLLGGTGMQPPNPPKPKLEFLNNKPPPNYVAGLGRGATGFTTRSDI 421
             GV  NSTLTL+ PLLGG  MQ P  PK +LEFLN KPPPNYVAGLGRGATGFTTRSDI
Sbjct: 61  AFGVGLNSTLTLYFPLLGG--MQAPVVPKSRLEFLNTKPPPNYVAGLGRGATGFTTRSDI 118

Query: 422 GPARAAPDLPDRSATTI 472
           GPARAAPDLPDRSATTI
Sbjct: 119 GPARAAPDLPDRSATTI 135