BLASTX nr result

ID: Coptis25_contig00007622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007622
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268629.1| PREDICTED: serine/threonine protein phosphat...   120   2e-51
gb|ABK95558.1| unknown [Populus trichocarpa]                          115   1e-40
ref|XP_002301608.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-40
ref|XP_004142950.1| PREDICTED: serine/threonine protein phosphat...   118   3e-40
ref|XP_002875297.1| hypothetical protein ARALYDRAFT_904782 [Arab...   112   1e-39

>ref|XP_002268629.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory
            subunit B' alpha isoform [Vitis vinifera]
            gi|147860819|emb|CAN81062.1| hypothetical protein
            VITISV_042421 [Vitis vinifera]
          Length = 502

 Score =  120 bits (300), Expect(4) = 2e-51
 Identities = 58/79 (73%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +2

Query: 896  SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 1072
            +W HL + YELLLR+      DTKIAK YIDHSFV+KLLDLFD++DP EREYLKT+LHRI
Sbjct: 184  AWPHLHLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFDADDPREREYLKTILHRI 243

Query: 1073 YGKFMVHCPFIRRGINNIF 1129
            YGKFMVH PFIR+ INNIF
Sbjct: 244  YGKFMVHRPFIRKAINNIF 262



 Score = 98.2 bits (243), Expect(4) = 2e-51
 Identities = 53/90 (58%), Positives = 64/90 (71%)
 Frame = +1

Query: 619 DITCFFVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEEL 798
           D    F+ KL+IC   FDF  T+K  REKEI  KR  LLE++DFIQSGSGKITE  QEE+
Sbjct: 91  DRQLLFLRKLQICCFQFDFTDTLKSVREKEI--KRQTLLELIDFIQSGSGKITENNQEEM 148

Query: 799 IRMVSVNIFWCLPLASHENTGIESGDPEED 888
           I+M+SVNIF C P A HEN+G E  + EE+
Sbjct: 149 IKMISVNIFRCFPPAPHENSGSEMLEIEEE 178



 Score = 30.8 bits (68), Expect(4) = 2e-51
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 576 VETLPLFRDVAISDRHNLFLCK 641
           ++ LP FRDVA+SDR  LFL K
Sbjct: 78  IDPLPPFRDVAVSDRQLLFLRK 99



 Score = 22.3 bits (46), Expect(4) = 2e-51
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 1251 FYHFIFETER 1280
            FY FI+ETER
Sbjct: 262  FYRFIYETER 271


>gb|ABK95558.1| unknown [Populus trichocarpa]
          Length = 541

 Score =  115 bits (288), Expect(3) = 1e-40
 Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = +2

Query: 896  SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 1072
            +W HLQI Y+ LLR       D K+AK YIDHSFV++LLDLFDSED  EREYLKT+LHRI
Sbjct: 201  AWPHLQIVYDFLLRFVASSETDAKLAKRYIDHSFVLRLLDLFDSEDQREREYLKTILHRI 260

Query: 1073 YGKFMVHCPFIRRGINNIFLLNMGIQPKTNG 1165
            YGKFMVH PFIR+ INNIF + +    + NG
Sbjct: 261  YGKFMVHRPFIRKAINNIFYIFIFETERHNG 291



 Score = 68.2 bits (165), Expect(3) = 1e-40
 Identities = 34/86 (39%), Positives = 54/86 (62%)
 Frame = +1

Query: 634 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 813
           F+ KL +C VVFDF    K  +EK+I  KR  L E++D+I + + K  E+  +E+ RMV+
Sbjct: 112 FMKKLNMCCVVFDFSDPSKNLKEKDI--KRQTLHELLDYISTVTSKFNEIAMQEITRMVA 169

Query: 814 VNIFWCLPLASHENTGIESGDPEEDD 891
            N+F  LP  +H+   +E  DPE+++
Sbjct: 170 ANLFRTLPSMNHDKKILEMFDPEDEE 195



 Score = 31.6 bits (70), Expect(3) = 1e-40
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 573 VVETLPLFRDVAISDRHNLFLCK 641
           V E LP FRDV  S++HNLF+ K
Sbjct: 93  VYEALPSFRDVPNSEKHNLFMKK 115


>ref|XP_002301608.1| predicted protein [Populus trichocarpa] gi|222843334|gb|EEE80881.1|
            predicted protein [Populus trichocarpa]
          Length = 514

 Score =  115 bits (288), Expect(3) = 1e-40
 Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
 Frame = +2

Query: 896  SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 1072
            +W HLQI Y+ LLR       D K+AK YIDHSFV++LLDLFDSED  EREYLKT+LHRI
Sbjct: 174  AWPHLQIVYDFLLRFVASSETDAKLAKRYIDHSFVLRLLDLFDSEDQREREYLKTILHRI 233

Query: 1073 YGKFMVHCPFIRRGINNIFLLNMGIQPKTNG 1165
            YGKFMVH PFIR+ INNIF + +    + NG
Sbjct: 234  YGKFMVHRPFIRKAINNIFYIFIFETERHNG 264



 Score = 68.2 bits (165), Expect(3) = 1e-40
 Identities = 34/86 (39%), Positives = 54/86 (62%)
 Frame = +1

Query: 634 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 813
           F+ KL +C VVFDF    K  +EK+I  KR  L E++D+I + + K  E+  +E+ RMV+
Sbjct: 85  FMKKLNMCCVVFDFSDPSKNLKEKDI--KRQTLHELLDYISTVTSKFNEIAMQEITRMVA 142

Query: 814 VNIFWCLPLASHENTGIESGDPEEDD 891
            N+F  LP  +H+   +E  DPE+++
Sbjct: 143 ANLFRTLPSMNHDKKILEMFDPEDEE 168



 Score = 31.6 bits (70), Expect(3) = 1e-40
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +3

Query: 573 VVETLPLFRDVAISDRHNLFLCK 641
           V E LP FRDV  S++HNLF+ K
Sbjct: 66  VYEALPSFRDVPNSEKHNLFMKK 88


>ref|XP_004142950.1| PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory
            subunit B' eta isoform-like [Cucumis sativus]
            gi|449494490|ref|XP_004159560.1| PREDICTED:
            serine/threonine protein phosphatase 2A 59 kDa regulatory
            subunit B' eta isoform-like [Cucumis sativus]
          Length = 525

 Score =  118 bits (295), Expect(3) = 3e-40
 Identities = 60/91 (65%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = +2

Query: 896  SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 1072
            +W HLQI YE  LR       D K+AK YIDHSF++KLLDLFDSEDP EREYLKT+LHRI
Sbjct: 195  AWPHLQIVYEFFLRFVASPEMDAKLAKRYIDHSFILKLLDLFDSEDPREREYLKTILHRI 254

Query: 1073 YGKFMVHCPFIRRGINNIFLLNMGIQPKTNG 1165
            YGKFMVH PFIR+ INNIF   +    K NG
Sbjct: 255  YGKFMVHRPFIRKAINNIFYRFIFETEKHNG 285



 Score = 70.9 bits (172), Expect(3) = 3e-40
 Identities = 39/86 (45%), Positives = 54/86 (62%)
 Frame = +1

Query: 634 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 813
           FV KL +C  +FDF    K  +EKEI  KR  LLEIVD++ S + K TE V +E+I+MVS
Sbjct: 106 FVKKLNLCCFLFDFTDPTKHLKEKEI--KRQTLLEIVDYVTSVNSKFTETVIQEVIKMVS 163

Query: 814 VNIFWCLPLASHENTGIESGDPEEDD 891
           +N+F  +     EN  +E  D EE++
Sbjct: 164 INLFRTMSPQPRENKIVEGFDLEEEE 189



 Score = 24.6 bits (52), Expect(3) = 3e-40
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 579 ETLPLFRDVAISDRHNLFLCK 641
           E LP FR+V  S++ NLF+ K
Sbjct: 89  EPLPGFREVPSSEKQNLFVKK 109


>ref|XP_002875297.1| hypothetical protein ARALYDRAFT_904782 [Arabidopsis lyrata subsp.
            lyrata] gi|297321135|gb|EFH51556.1| hypothetical protein
            ARALYDRAFT_904782 [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score =  112 bits (280), Expect(3) = 1e-39
 Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
 Frame = +2

Query: 896  SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 1072
            +W HLQ+ YEL LR       DTK+AK YID SFV++LLDLFDSEDP ER+ LKT+LHRI
Sbjct: 205  AWPHLQLVYELFLRFVASPETDTKLAKRYIDQSFVLRLLDLFDSEDPRERDCLKTILHRI 264

Query: 1073 YGKFMVHCPFIRRGINNIFLLNMGIQPKTNG 1165
            YGKFMVH PFIR+ INNIF   +    K NG
Sbjct: 265  YGKFMVHRPFIRKSINNIFYRFVFETEKHNG 295



 Score = 73.9 bits (180), Expect(3) = 1e-39
 Identities = 42/86 (48%), Positives = 56/86 (65%)
 Frame = +1

Query: 634 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 813
           F+ KL +C VVFDF    K  +EKEI  KR  LLE+VD++ S +GK +EV  +E+IRMVS
Sbjct: 116 FIKKLNLCRVVFDFTDPTKNIKEKEI--KRQTLLELVDYVNSPNGKFSEVGIQEVIRMVS 173

Query: 814 VNIFWCLPLASHENTGIESGDPEEDD 891
            NIF  L     EN  I++ D EE++
Sbjct: 174 ANIFRTLNPQPRENKVIDALDLEEEE 199



 Score = 25.0 bits (53), Expect(3) = 1e-39
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3

Query: 579 ETLPLFRDVAISDRHNLFLCK 641
           E LP F+DV  +++ NLF+ K
Sbjct: 99  EALPSFKDVPNTEKQNLFIKK 119


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