BLASTX nr result

ID: Coptis25_contig00007618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007618
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vi...   143   1e-32
emb|CBI39169.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002310453.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|XP_003555639.1| PREDICTED: gem-associated protein 2-like [Gl...   141   5e-32
ref|XP_002327849.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30

>ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vitis vinifera]
          Length = 314

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/110 (63%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = +1

Query: 76  SGSEDEYASIQRPAFFVEGDPDFDSGPPQDGLEFLRRVRWEAAQIP-XXXXXXXXXXXXX 252
           S S+++Y SIQRPAF VEG+PDFDSGPP+DGLE+LRRVRWEAAQIP              
Sbjct: 31  SDSDEDYGSIQRPAFLVEGEPDFDSGPPEDGLEYLRRVRWEAAQIPEVTVAKLDMNKLNK 90

Query: 253 EQTVYMPIIPDIAKCPEHLLPSEEWEDAFLAYYSELRLASSQLDISSLQN 402
           EQT+YMP IPDIAKCPEHL P ++WEDAFLA ++ELR A S L+ S ++N
Sbjct: 91  EQTLYMPKIPDIAKCPEHLAPLKKWEDAFLADFAELRAALSHLEDSRVEN 140


>emb|CBI39169.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/110 (63%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = +1

Query: 76  SGSEDEYASIQRPAFFVEGDPDFDSGPPQDGLEFLRRVRWEAAQIP-XXXXXXXXXXXXX 252
           S S+++Y SIQRPAF VEG+PDFDSGPP+DGLE+LRRVRWEAAQIP              
Sbjct: 374 SDSDEDYGSIQRPAFLVEGEPDFDSGPPEDGLEYLRRVRWEAAQIPEVTVAKLDMNKLNK 433

Query: 253 EQTVYMPIIPDIAKCPEHLLPSEEWEDAFLAYYSELRLASSQLDISSLQN 402
           EQT+YMP IPDIAKCPEHL P ++WEDAFLA ++ELR A S L+ S ++N
Sbjct: 434 EQTLYMPKIPDIAKCPEHLAPLKKWEDAFLADFAELRAALSHLEDSRVEN 483


>ref|XP_002310453.1| predicted protein [Populus trichocarpa] gi|222853356|gb|EEE90903.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  142 bits (357), Expect = 4e-32
 Identities = 82/158 (51%), Positives = 99/158 (62%), Gaps = 12/158 (7%)
 Frame = +1

Query: 82  SEDEYASIQRPAFFVEGDPDFDSGPPQDGLEFLRRVRWEAAQIP-XXXXXXXXXXXXXEQ 258
           S+D+YA+IQRPAF VEG+P+FDSGPP+DGLE+LRRVRWEAA IP              EQ
Sbjct: 9   SDDDYATIQRPAFAVEGEPEFDSGPPEDGLEYLRRVRWEAAHIPKVKVAKLDRSRVNKEQ 68

Query: 259 TVYMPIIPDIAKCPEHLLPSEEWEDAFLAYYSELRL---ASSQLDISSL--------QNC 405
           TVYMP IPDIAKCPE+LLPS +WED FLA +SELRL   +SS+  I  L        ++ 
Sbjct: 69  TVYMPQIPDIAKCPEYLLPSRQWEDVFLADFSELRLPDTSSSESIIDQLCMENREDRRSL 128

Query: 406 GYLQMWXXXXXXXXXXXXXPMLSNILGMDAVSRAAMLR 519
              Q               P L  IL MD+V+R +MLR
Sbjct: 129 TPSQHQTPEASSSDALCNYPTLPVILAMDSVARVSMLR 166


>ref|XP_003555639.1| PREDICTED: gem-associated protein 2-like [Glycine max]
          Length = 328

 Score =  141 bits (356), Expect = 5e-32
 Identities = 75/136 (55%), Positives = 91/136 (66%), Gaps = 4/136 (2%)
 Frame = +1

Query: 25  NENILGED---FSPNLDDFGSGSEDEYASIQRPAFFVEGDPDFDSGPPQDGLEFLRRVRW 195
           + N++GED         +   GS+D+YASIQRPAF V+G+P+FDSGPP+DG E+LRRVRW
Sbjct: 25  SHNLVGEDGCSIVKECSEEDDGSDDDYASIQRPAFMVDGEPNFDSGPPEDGWEYLRRVRW 84

Query: 196 EAAQIP-XXXXXXXXXXXXXEQTVYMPIIPDIAKCPEHLLPSEEWEDAFLAYYSELRLAS 372
           EA QIP              EQ+ YMP IPDIAKCPEHLLP +EWEDAFLA +S LR   
Sbjct: 85  EAHQIPKVKVAKLDRGKLNKEQSAYMPQIPDIAKCPEHLLPLKEWEDAFLAEFSALRTNF 144

Query: 373 SQLDISSLQNCGYLQM 420
           S LD SS  + G L +
Sbjct: 145 SCLDGSSAIHSGNLHV 160


>ref|XP_002327849.1| predicted protein [Populus trichocarpa] gi|222837258|gb|EEE75637.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  135 bits (340), Expect = 4e-30
 Identities = 70/118 (59%), Positives = 83/118 (70%), Gaps = 1/118 (0%)
 Frame = +1

Query: 13  EHELNENILGEDFSPNLDDFGSGSEDEYASIQRPAFFVEGDPDFDSGPPQDGLEFLRRVR 192
           E ++    L E +   +D     S+D+YASIQRPAF VEG+PDFDSGPP+DGLEFLRRVR
Sbjct: 177 EPDIPGKFLEEAYGEEVD-----SDDDYASIQRPAFAVEGEPDFDSGPPEDGLEFLRRVR 231

Query: 193 WEAAQIP-XXXXXXXXXXXXXEQTVYMPIIPDIAKCPEHLLPSEEWEDAFLAYYSELR 363
           WEAA IP              EQTVYMP IP+IAKCPE+LLP ++WEDAFL  +SELR
Sbjct: 232 WEAAHIPKVKVAKLDRSRVNKEQTVYMPQIPNIAKCPEYLLPLKQWEDAFLVDFSELR 289


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