BLASTX nr result

ID: Coptis25_contig00007610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007610
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553543.1| PREDICTED: uncharacterized protein LOC100786...    91   2e-16
ref|XP_003632609.1| PREDICTED: uncharacterized protein LOC100854...    87   4e-15
ref|XP_002519556.1| conserved hypothetical protein [Ricinus comm...    83   6e-14
gb|AFK41563.1| unknown [Lotus japonicus]                               82   1e-13
ref|XP_002326344.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13

>ref|XP_003553543.1| PREDICTED: uncharacterized protein LOC100786645 [Glycine max]
          Length = 259

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 70/197 (35%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
 Frame = +1

Query: 76  MDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIGLNSESDLSLTPPSEENISEGSS 255
           MD LWFHQ ILFS                   P ++    S S LS  PP +E   E S+
Sbjct: 13  MDRLWFHQAILFSEPTASVISLPSPPDEKKPVPTSESVSCSSSILSSPPPPDE---ETST 69

Query: 256 DTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXXXXXXXXXXXXXX 435
           D SP+S ++ +            + N    K                             
Sbjct: 70  DESPSSEQQLSSESMSVPLQDGSINNEEERKDGLTRMNLLDNRTRSHSSSPSTQNRHRKL 129

Query: 436 LRNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLD-- 609
            +     A  L+K++SCR+L ELE +EVKGFMDLGFTFKKE LS RMMSVIPGLQRL   
Sbjct: 130 RKPATTCARKLQKSISCRTLGELELDEVKGFMDLGFTFKKECLSPRMMSVIPGLQRLGVM 189

Query: 610 EYKDGPEGHCINAKSEE 660
           +  +  EG+ I A+ ++
Sbjct: 190 DATETVEGNHIEAEEQK 206


>ref|XP_003632609.1| PREDICTED: uncharacterized protein LOC100854914 [Vitis vinifera]
           gi|297741575|emb|CBI32707.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 76/216 (35%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
 Frame = +1

Query: 49  YSPNNLLLVMDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIG---LNSESDLSLT 219
           +S + L+  MD LWF+Q+ILFS+                + P T      L   SDLS  
Sbjct: 5   HSLSLLVAAMDGLWFNQVILFSNPMSLLSPTTLR-----IAPQTTSSDSLLYCLSDLSAP 59

Query: 220 PPSEENISEGSSDTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXX 399
           PPSEE  S   S  SP     D             +      +++RP             
Sbjct: 60  PPSEEETSAYLS-ASPLPQLVDEEDDPKNQGEDKEM-----KQKERPNRLNLMTRKTRSF 113

Query: 400 XXXXXXXXXXXXLRNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMM 579
                        R +GA   L  K MSC+SL ELE EEVKGFMDLGF FK+E LS RM+
Sbjct: 114 SSSPATKKRAKNHRYLGAVTSL-PKTMSCKSLRELELEEVKGFMDLGFKFKREHLSPRMI 172

Query: 580 SVIPGLQRLDEYKDGPE------GHCINAKSEEMEE 669
           +VIPGLQRL  Y +  E          N K +++EE
Sbjct: 173 TVIPGLQRLGGYNNEQETELSDSTQSANYKDDKIEE 208


>ref|XP_002519556.1| conserved hypothetical protein [Ricinus communis]
           gi|223541419|gb|EEF42970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = +1

Query: 439 RNIGAKAPLLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLDEYK 618
           +NIG +  +L+K+MSCRSL ELE EEVKGFMDLGF FKKEQ+S RM+SV+PGL RL  YK
Sbjct: 34  KNIGLRK-VLQKSMSCRSLGELELEEVKGFMDLGFIFKKEQISPRMISVVPGLSRLGLYK 92


>gb|AFK41563.1| unknown [Lotus japonicus]
          Length = 226

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 63/185 (34%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
 Frame = +1

Query: 76  MDCLWFHQIILFSSEXXXXXXXXXXXXXXXVEPITKIGLNSESDLSLTPPSEENISEGSS 255
           MD LWF QIILFS +                 PI++    S S LSL P  +E  S   S
Sbjct: 13  MDRLWFQQIILFSQQPITASSVAPHEPVEIPIPISESTSCSSSILSLPPLQDEETSTDES 72

Query: 256 DTSPTSPKEDNLVXXXXXXXXXXVINYYNYKRKRPTXXXXXXXXXXXXXXXXXXXXXXXX 435
             SP        +              +N K +                           
Sbjct: 73  SPSPEKQVFSESIFVPIQDGS------FNNKEETKEGFARIDLLDTRTTHSCSSSPSTTQ 126

Query: 436 LRNIGAKAPL-------LRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPG 594
            R+   + P        L K+MSCR+L ELE +EVKGFMDLGF FKKE +S RM+SV+PG
Sbjct: 127 KRHRKFRKPATSSSTRKLDKSMSCRTLGELELDEVKGFMDLGFMFKKEYISPRMISVLPG 186

Query: 595 LQRLD 609
           LQR D
Sbjct: 187 LQRPD 191


>ref|XP_002326344.1| predicted protein [Populus trichocarpa] gi|222833537|gb|EEE72014.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/66 (63%), Positives = 50/66 (75%)
 Frame = +1

Query: 463 LLRKAMSCRSLFELEYEEVKGFMDLGFTFKKEQLSSRMMSVIPGLQRLDEYKDGPEGHCI 642
           +L K+MSCRSL ELE EEVKGFMDLGF FKKE LS RMMSV+PGLQRL  Y++    +  
Sbjct: 34  ILPKSMSCRSLGELELEEVKGFMDLGFIFKKEYLSPRMMSVVPGLQRLGLYQNRQNINLR 93

Query: 643 NAKSEE 660
           ++K  E
Sbjct: 94  DSKEAE 99


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