BLASTX nr result
ID: Coptis25_contig00007606
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007606 (614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] 254 8e-66 ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro... 253 1e-65 gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 251 5e-65 ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 251 9e-65 ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 246 3e-63 >emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera] Length = 186 Score = 254 bits (649), Expect = 8e-66 Identities = 130/184 (70%), Positives = 152/184 (82%) Frame = +2 Query: 29 LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208 LVG FKG L +IT ++ VSFP ++ +PLTIESAHKKGAGSTKNG Sbjct: 6 LVGAFKGLSLSSTSSFLRGD-LGSITGSSKLCVSFP--LKSLPLTIESAHKKGAGSTKNG 62 Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388 RDS+G+RLGVKIYGDQVAKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG Sbjct: 63 RDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 122 Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568 PDRK++SVYP +QPENPNS RA+KRE FR+QRE++KAR+EG + QPQLVLASA+ +++G Sbjct: 123 PDRKKISVYPXVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDG 182 Query: 569 NPNC 580 NP C Sbjct: 183 NPIC 186 >ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis vinifera] gi|296082339|emb|CBI21344.3| unnamed protein product [Vitis vinifera] Length = 186 Score = 253 bits (647), Expect = 1e-65 Identities = 130/184 (70%), Positives = 152/184 (82%) Frame = +2 Query: 29 LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208 LVG FKG L +IT ++ VSFP ++ +PLTIESAHKKGAGSTKNG Sbjct: 6 LVGAFKGLSLSSTSSFLRGD-LGSITGSSKLCVSFP--LKSLPLTIESAHKKGAGSTKNG 62 Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388 RDS+G+RLGVKIYGDQVAKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG Sbjct: 63 RDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 122 Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568 PDRK++SVYP +QPENPNS RA+KRE FR+QRE++KAR+EG + QPQLVLASA+ +++G Sbjct: 123 PDRKKISVYPCVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDG 182 Query: 569 NPNC 580 NP C Sbjct: 183 NPIC 186 >gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] Length = 197 Score = 251 bits (642), Expect = 5e-65 Identities = 120/151 (79%), Positives = 137/151 (90%), Gaps = 1/151 (0%) Frame = +2 Query: 131 FPQPIQF-VPLTIESAHKKGAGSTKNGRDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVH 307 F P++ +PLTI+ AHKKGAGSTKNGRDSKGKRLGVKIYGDQ AKPGAII+RQRGTK H Sbjct: 47 FKAPVKAPLPLTIQMAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFH 106 Query: 308 PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPREVQPENPNSYRARKRENFRIQR 487 PGKNVG+GKDHTIFSLIDGLVKFEKFGPDRK++SVYPRE+QPENPNSYRARKRENFR+QR Sbjct: 107 PGKNVGIGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQR 166 Query: 488 EKRKARQEGYIYQPQLVLASADGSSEGNPNC 580 E++KAR+EG + QPQLVLAS +++ NP C Sbjct: 167 ERKKARKEGIVAQPQLVLASNVDAADSNPVC 197 >ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis] gi|223549405|gb|EEF50893.1| ribosomal protein L27, putative [Ricinus communis] Length = 195 Score = 251 bits (640), Expect = 9e-65 Identities = 128/184 (69%), Positives = 146/184 (79%) Frame = +2 Query: 29 LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208 L+GTFKG ++ + N VS P F PLTIE AHKKGAGSTKNG Sbjct: 14 LIGTFKGLSLSSSSSFFKGDTTLNLSLSRNC-VSLPLKAPF-PLTIEMAHKKGAGSTKNG 71 Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388 RDS G+RLGVKI+G+Q AKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG Sbjct: 72 RDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 131 Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568 PDRK+VSVYPREVQPENPNSYRARKRE FR+QRE++KAR+EG I +PQLVLAS +++ Sbjct: 132 PDRKKVSVYPREVQPENPNSYRARKREYFRLQRERKKARKEGLIAEPQLVLASNVDATDD 191 Query: 569 NPNC 580 NP+C Sbjct: 192 NPDC 195 >ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1 [Cucumis sativus] gi|449441698|ref|XP_004138619.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 2 [Cucumis sativus] gi|449518795|ref|XP_004166421.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1 [Cucumis sativus] gi|449518797|ref|XP_004166422.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 2 [Cucumis sativus] Length = 183 Score = 246 bits (627), Expect = 3e-63 Identities = 124/161 (77%), Positives = 139/161 (86%) Frame = +2 Query: 98 TITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNGRDSKGKRLGVKIYGDQVAKPGAI 277 +I T+ VSFP PLTIE+AHKKGAGSTKNGRDSKG+RLGVKI+GDQVAKPG+I Sbjct: 27 SIHTSPKLSVSFPN---IFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSI 83 Query: 278 IIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPREVQPENPNSYRA 457 I+RQRGTK H GKNVGLGKDHTIFSLIDGLVKFEK+GPD+K+VSVYPREVQPENPNSYRA Sbjct: 84 IVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRA 143 Query: 458 RKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEGNPNC 580 RKRE FR+QRE++KAR+EG I QPQL+LAS D E NP C Sbjct: 144 RKREYFRLQRERKKARKEGIIAQPQLLLASTD-DVETNPVC 183