BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007606
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]   254   8e-66
ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloro...   253   1e-65
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      251   5e-65
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   251   9e-65
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro...   246   3e-63

>emb|CAN67770.1| hypothetical protein VITISV_010521 [Vitis vinifera]
          Length = 186

 Score =  254 bits (649), Expect = 8e-66
 Identities = 130/184 (70%), Positives = 152/184 (82%)
 Frame = +2

Query: 29  LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208
           LVG FKG              L +IT ++   VSFP  ++ +PLTIESAHKKGAGSTKNG
Sbjct: 6   LVGAFKGLSLSSTSSFLRGD-LGSITGSSKLCVSFP--LKSLPLTIESAHKKGAGSTKNG 62

Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388
           RDS+G+RLGVKIYGDQVAKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG
Sbjct: 63  RDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 122

Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568
           PDRK++SVYP  +QPENPNS RA+KRE FR+QRE++KAR+EG + QPQLVLASA+ +++G
Sbjct: 123 PDRKKISVYPXVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDG 182

Query: 569 NPNC 580
           NP C
Sbjct: 183 NPIC 186


>ref|XP_002270270.1| PREDICTED: 50S ribosomal protein L27, chloroplastic [Vitis
           vinifera] gi|296082339|emb|CBI21344.3| unnamed protein
           product [Vitis vinifera]
          Length = 186

 Score =  253 bits (647), Expect = 1e-65
 Identities = 130/184 (70%), Positives = 152/184 (82%)
 Frame = +2

Query: 29  LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208
           LVG FKG              L +IT ++   VSFP  ++ +PLTIESAHKKGAGSTKNG
Sbjct: 6   LVGAFKGLSLSSTSSFLRGD-LGSITGSSKLCVSFP--LKSLPLTIESAHKKGAGSTKNG 62

Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388
           RDS+G+RLGVKIYGDQVAKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG
Sbjct: 63  RDSRGQRLGVKIYGDQVAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 122

Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568
           PDRK++SVYP  +QPENPNS RA+KRE FR+QRE++KAR+EG + QPQLVLASA+ +++G
Sbjct: 123 PDRKKISVYPCVLQPENPNSCRAKKREYFRMQRERKKARKEGIVPQPQLVLASANEATDG 182

Query: 569 NPNC 580
           NP C
Sbjct: 183 NPIC 186


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  251 bits (642), Expect = 5e-65
 Identities = 120/151 (79%), Positives = 137/151 (90%), Gaps = 1/151 (0%)
 Frame = +2

Query: 131 FPQPIQF-VPLTIESAHKKGAGSTKNGRDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVH 307
           F  P++  +PLTI+ AHKKGAGSTKNGRDSKGKRLGVKIYGDQ AKPGAII+RQRGTK H
Sbjct: 47  FKAPVKAPLPLTIQMAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFH 106

Query: 308 PGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPREVQPENPNSYRARKRENFRIQR 487
           PGKNVG+GKDHTIFSLIDGLVKFEKFGPDRK++SVYPRE+QPENPNSYRARKRENFR+QR
Sbjct: 107 PGKNVGIGKDHTIFSLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQR 166

Query: 488 EKRKARQEGYIYQPQLVLASADGSSEGNPNC 580
           E++KAR+EG + QPQLVLAS   +++ NP C
Sbjct: 167 ERKKARKEGIVAQPQLVLASNVDAADSNPVC 197


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  251 bits (640), Expect = 9e-65
 Identities = 128/184 (69%), Positives = 146/184 (79%)
 Frame = +2

Query: 29  LVGTFKGXXXXXXXXXXXXXVLTTITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNG 208
           L+GTFKG                 ++ + N  VS P    F PLTIE AHKKGAGSTKNG
Sbjct: 14  LIGTFKGLSLSSSSSFFKGDTTLNLSLSRNC-VSLPLKAPF-PLTIEMAHKKGAGSTKNG 71

Query: 209 RDSKGKRLGVKIYGDQVAKPGAIIIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFG 388
           RDS G+RLGVKI+G+Q AKPGAII+RQRGTK HPGKNVGLGKDHTIFSLIDGLVKFEKFG
Sbjct: 72  RDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFEKFG 131

Query: 389 PDRKQVSVYPREVQPENPNSYRARKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEG 568
           PDRK+VSVYPREVQPENPNSYRARKRE FR+QRE++KAR+EG I +PQLVLAS   +++ 
Sbjct: 132 PDRKKVSVYPREVQPENPNSYRARKREYFRLQRERKKARKEGLIAEPQLVLASNVDATDD 191

Query: 569 NPNC 580
           NP+C
Sbjct: 192 NPDC 195


>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449441698|ref|XP_004138619.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
           gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
           ribosomal protein L27, chloroplastic-like isoform 1
           [Cucumis sativus] gi|449518797|ref|XP_004166422.1|
           PREDICTED: 50S ribosomal protein L27, chloroplastic-like
           isoform 2 [Cucumis sativus]
          Length = 183

 Score =  246 bits (627), Expect = 3e-63
 Identities = 124/161 (77%), Positives = 139/161 (86%)
 Frame = +2

Query: 98  TITTANNYKVSFPQPIQFVPLTIESAHKKGAGSTKNGRDSKGKRLGVKIYGDQVAKPGAI 277
           +I T+    VSFP      PLTIE+AHKKGAGSTKNGRDSKG+RLGVKI+GDQVAKPG+I
Sbjct: 27  SIHTSPKLSVSFPN---IFPLTIENAHKKGAGSTKNGRDSKGQRLGVKIFGDQVAKPGSI 83

Query: 278 IIRQRGTKVHPGKNVGLGKDHTIFSLIDGLVKFEKFGPDRKQVSVYPREVQPENPNSYRA 457
           I+RQRGTK H GKNVGLGKDHTIFSLIDGLVKFEK+GPD+K+VSVYPREVQPENPNSYRA
Sbjct: 84  IVRQRGTKFHAGKNVGLGKDHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRA 143

Query: 458 RKRENFRIQREKRKARQEGYIYQPQLVLASADGSSEGNPNC 580
           RKRE FR+QRE++KAR+EG I QPQL+LAS D   E NP C
Sbjct: 144 RKREYFRLQRERKKARKEGIIAQPQLLLASTD-DVETNPVC 183