BLASTX nr result

ID: Coptis25_contig00007600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007600
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18365.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241...   185   4e-45
ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arab...   174   7e-42
ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana] ...   173   2e-41

>emb|CBI18365.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/147 (65%), Positives = 112/147 (76%)
 Frame = +3

Query: 6   MSSKSYSLDMHSSHIYSYGDHLDASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACD 185
           + SK  +++   S +   G   ++SLWS  + S +SS V SPQ  +K  S VL T N CD
Sbjct: 298 LPSKPSAVESQCSSLSPRGHLSNSSLWSSSERSIISSWVQSPQVDVKGHSEVLATENVCD 357

Query: 186 PYKVRGKLSWADIGGYKLATEISGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCK 365
           PYKVRGKLSWADIG Y LATE+S +SVGKKQLEYASGALR +R+LVEQLAKVN I L C 
Sbjct: 358 PYKVRGKLSWADIGTYGLATEVSWMSVGKKQLEYASGALRRFRTLVEQLAKVNPIQLNCN 417

Query: 366 EKLAFWINLYNALIMHAYLAYGVPQSE 446
           EKLAFWINLYNALIMHAYLAYGVP+S+
Sbjct: 418 EKLAFWINLYNALIMHAYLAYGVPRSD 444


>ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera]
          Length = 566

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/147 (65%), Positives = 112/147 (76%)
 Frame = +3

Query: 6   MSSKSYSLDMHSSHIYSYGDHLDASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACD 185
           + SK  +++   S +   G   ++SLWS  + S +SS V SPQ  +K  S VL T N CD
Sbjct: 235 LPSKPSAVESQCSSLSPRGHLSNSSLWSSSERSIISSWVQSPQVDVKGHSEVLATENVCD 294

Query: 186 PYKVRGKLSWADIGGYKLATEISGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCK 365
           PYKVRGKLSWADIG Y LATE+S +SVGKKQLEYASGALR +R+LVEQLAKVN I L C 
Sbjct: 295 PYKVRGKLSWADIGTYGLATEVSWMSVGKKQLEYASGALRRFRTLVEQLAKVNPIQLNCN 354

Query: 366 EKLAFWINLYNALIMHAYLAYGVPQSE 446
           EKLAFWINLYNALIMHAYLAYGVP+S+
Sbjct: 355 EKLAFWINLYNALIMHAYLAYGVPRSD 381


>ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp.
           lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein
           ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 2/148 (1%)
 Frame = +3

Query: 9   SSKSYSLDMHSSHIYSYGDHLD--ASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNAC 182
           +SK+ S + H S +   G HL   AS W   + S +SS V SPQ  +++ +NVL TG+  
Sbjct: 250 TSKASSNESHLSPVSPRG-HLSSSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVF 308

Query: 183 DPYKVRGKLSWADIGGYKLATEISGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRC 362
           DPY+VRGKLSWA+IG Y LA+E+S +SVGKKQLEYASGALR +R+LVEQLA+VN I L C
Sbjct: 309 DPYRVRGKLSWAEIGSYSLASEVSWMSVGKKQLEYASGALRKFRTLVEQLARVNPIHLSC 368

Query: 363 KEKLAFWINLYNALIMHAYLAYGVPQSE 446
            EKLAFWINLYNALIMHAYLAYGVP+S+
Sbjct: 369 NEKLAFWINLYNALIMHAYLAYGVPKSD 396


>ref|XP_002310343.1| predicted protein [Populus trichocarpa] gi|222853246|gb|EEE90793.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  173 bits (439), Expect = 1e-41
 Identities = 93/145 (64%), Positives = 108/145 (74%)
 Frame = +3

Query: 12  SKSYSLDMHSSHIYSYGDHLDASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPY 191
           S S +L+  SS +   G    +S WS  + S +SS V SPQ  ++S S VL  G+  DPY
Sbjct: 116 SMSSALESQSSPVSPRGHLSSSSWWSSSERSMISSWVQSPQIDIQSNSEVLALGSVFDPY 175

Query: 192 KVRGKLSWADIGGYKLATEISGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEK 371
           KV GKLSWADIG Y LATE+S +SVGKKQLEYASGALR +R+LVEQLAKVN I L   EK
Sbjct: 176 KVHGKLSWADIGNYGLATEVSWMSVGKKQLEYASGALRKFRTLVEQLAKVNPIHLSSNEK 235

Query: 372 LAFWINLYNALIMHAYLAYGVPQSE 446
           LAFWINLYNALIMHAYLAYGVP+S+
Sbjct: 236 LAFWINLYNALIMHAYLAYGVPRSD 260


>ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana]
           gi|15795132|dbj|BAB02510.1| unnamed protein product
           [Arabidopsis thaliana] gi|20260518|gb|AAM13157.1|
           unknown protein [Arabidopsis thaliana]
           gi|31711976|gb|AAP68344.1| At3g13000 [Arabidopsis
           thaliana] gi|332641754|gb|AEE75275.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 553

 Score =  173 bits (438), Expect = 2e-41
 Identities = 92/148 (62%), Positives = 114/148 (77%), Gaps = 2/148 (1%)
 Frame = +3

Query: 9   SSKSYSLDMHSSHIYSYGDHLD--ASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNAC 182
           +SK+ S + H S +   G HL   AS W   + S +SS V SPQ  +++ +NVL TG+  
Sbjct: 221 TSKASSNESHLSPVSPRG-HLSSSASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVF 279

Query: 183 DPYKVRGKLSWADIGGYKLATEISGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRC 362
           DPY+VRGKLSWA+IG Y LA+E+S +SVGKKQLEYASGAL+ +R+LVEQLA+VN I L C
Sbjct: 280 DPYRVRGKLSWAEIGNYSLASEVSWMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSC 339

Query: 363 KEKLAFWINLYNALIMHAYLAYGVPQSE 446
            EKLAFWINLYNALIMHAYLAYGVP+S+
Sbjct: 340 NEKLAFWINLYNALIMHAYLAYGVPKSD 367


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