BLASTX nr result

ID: Coptis25_contig00007584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007584
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinife...   287   5e-75
ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricin...   286   1e-74
ref|XP_002314881.1| predicted membrane protein [Populus trichoca...   283   1e-73
ref|XP_002312384.1| predicted membrane protein [Populus trichoca...   278   2e-72
ref|XP_002329381.1| predicted membrane protein [Populus trichoca...   278   3e-72

>ref|XP_002281939.1| PREDICTED: GDT1-like protein 4 [Vitis vinifera]
            gi|297737851|emb|CBI27052.3| unnamed protein product
            [Vitis vinifera]
          Length = 230

 Score =  287 bits (734), Expect = 5e-75
 Identities = 153/228 (67%), Positives = 169/228 (74%)
 Frame = -1

Query: 1204 MSLTVLQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLG 1025
            MSL+V+QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTI S ++G
Sbjct: 1    MSLSVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTIFSVVVG 60

Query: 1024 WAAPNLISRKWTHHIAXXXXXXXXXXXXXXXFTGKNXXXXXXXXXXXXXXXXXXXXXXXX 845
            WAAPNL+SRKWTHHI                F                            
Sbjct: 61   WAAPNLLSRKWTHHITTLLFFGFGLWSLWDGFKEDGEAEELAEVEAKLNADWKTNTSSAK 120

Query: 844  XXXXXXXXXXKQRRPLLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLG 665
                      KQRRP+L QFFSPI LKAFSITFFGEWGDKSQ+ATIGLAADENP+GVVLG
Sbjct: 121  GDSKDDDELKKQRRPILMQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPIGVVLG 180

Query: 664  GILGQALCTTAAVLGGKSLASQISERMVALSGGILFLIFGVQSLLATV 521
            GI+GQALCTTAAVLGGKSLASQISE+ VALSGG+LF++FG+QSLL+TV
Sbjct: 181  GIIGQALCTTAAVLGGKSLASQISEKFVALSGGVLFIVFGIQSLLSTV 228


>ref|XP_002529148.1| Transmembrane protein TPARL, putative [Ricinus communis]
            gi|223531427|gb|EEF33261.1| Transmembrane protein TPARL,
            putative [Ricinus communis]
          Length = 228

 Score =  286 bits (731), Expect = 1e-74
 Identities = 153/225 (68%), Positives = 169/225 (75%)
 Frame = -1

Query: 1195 TVLQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAA 1016
            +++QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA++GWAA
Sbjct: 3    SLVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAVVGWAA 62

Query: 1015 PNLISRKWTHHIAXXXXXXXXXXXXXXXFTGKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 836
            PNL+SR WTHHI                FT K                            
Sbjct: 63   PNLLSRTWTHHITTLLFFGFGIWSLWDGFTDKGEAEELAEVEAKLDADWKANKGTTKDGA 122

Query: 835  XXXXXXXKQRRPLLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 656
                   KQRRP L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVVLGGI+
Sbjct: 123  KADDELKKQRRPFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGIV 182

Query: 655  GQALCTTAAVLGGKSLASQISERMVALSGGILFLIFGVQSLLATV 521
            GQALCTTAAV+GGKSLASQISE++VALSGG+LF+IFG+QS L+TV
Sbjct: 183  GQALCTTAAVVGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTV 227


>ref|XP_002314881.1| predicted membrane protein [Populus trichocarpa]
            gi|222863921|gb|EEF01052.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 228

 Score =  283 bits (723), Expect = 1e-73
 Identities = 153/225 (68%), Positives = 166/225 (73%)
 Frame = -1

Query: 1195 TVLQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAA 1016
            +V QGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA++GWAA
Sbjct: 3    SVAQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAIVGWAA 62

Query: 1015 PNLISRKWTHHIAXXXXXXXXXXXXXXXFTGKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 836
            PNLISR WTHHI                F  K                            
Sbjct: 63   PNLISRTWTHHITTILFFGFGFWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTTKGGS 122

Query: 835  XXXXXXXKQRRPLLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 656
                   K+RRP L+Q FSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGI+
Sbjct: 123  KDDDELKKRRRPFLSQLFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIV 182

Query: 655  GQALCTTAAVLGGKSLASQISERMVALSGGILFLIFGVQSLLATV 521
            GQALCTTAAV GGKSLASQISE++VALSGG+LF+IFG+QS L+TV
Sbjct: 183  GQALCTTAAVFGGKSLASQISEKIVALSGGVLFIIFGIQSFLSTV 227


>ref|XP_002312384.1| predicted membrane protein [Populus trichocarpa]
            gi|222852204|gb|EEE89751.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 224

 Score =  278 bits (711), Expect = 2e-72
 Identities = 149/223 (66%), Positives = 164/223 (73%)
 Frame = -1

Query: 1189 LQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAAPN 1010
            ++GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA +GWAAPN
Sbjct: 1    IKGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAAPN 60

Query: 1009 LISRKWTHHIAXXXXXXXXXXXXXXXFTGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 830
            LISR WTHHI                F  K                              
Sbjct: 61   LISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKAGSKD 120

Query: 829  XXXXXKQRRPLLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGILGQ 650
                 KQRR  L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVV+GGI+GQ
Sbjct: 121  SDEFKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIVGQ 180

Query: 649  ALCTTAAVLGGKSLASQISERMVALSGGILFLIFGVQSLLATV 521
            ALCTTAAV+GGKSLASQISE++VALSGG+LF++FG+QS L+TV
Sbjct: 181  ALCTTAAVIGGKSLASQISEKIVALSGGVLFIVFGIQSFLSTV 223


>ref|XP_002329381.1| predicted membrane protein [Populus trichocarpa]
            gi|222870431|gb|EEF07562.1| predicted membrane protein
            [Populus trichocarpa]
          Length = 228

 Score =  278 bits (710), Expect = 3e-72
 Identities = 149/225 (66%), Positives = 164/225 (72%)
 Frame = -1

Query: 1195 TVLQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLAGCLAALIVMTILSALLGWAA 1016
            +V QGFTKSLAMTV+SEIGDKTFFAAAILAMRHPRRLVL+GCLAALIVMTILSA +GWAA
Sbjct: 3    SVAQGFTKSLAMTVVSEIGDKTFFAAAILAMRHPRRLVLSGCLAALIVMTILSAAVGWAA 62

Query: 1015 PNLISRKWTHHIAXXXXXXXXXXXXXXXFTGKNXXXXXXXXXXXXXXXXXXXXXXXXXXX 836
            PNLISR WTHHI                F  K                            
Sbjct: 63   PNLISRAWTHHITTILFFGFGLWSLWDGFNDKGEAEELAEVEAKLDADWKANTGTAKVGS 122

Query: 835  XXXXXXXKQRRPLLTQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPLGVVLGGIL 656
                   KQRR  L+QFFSPILLKAFSITFFGEWGDKSQIATIGLAADENP GVV+GGI+
Sbjct: 123  KDSDELKKQRRTFLSQFFSPILLKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGIV 182

Query: 655  GQALCTTAAVLGGKSLASQISERMVALSGGILFLIFGVQSLLATV 521
            GQALCTTAAV+GGKSLASQISE++ ALSGG+LF++FG+QS L+TV
Sbjct: 183  GQALCTTAAVIGGKSLASQISEKIAALSGGVLFIVFGIQSFLSTV 227


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