BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007578
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280965.1| PREDICTED: caseinolytic peptidase B protein ...   118   1e-24
gb|AAM62603.1| rubisco expression protein, putative [Arabidopsis...   115   1e-23
ref|XP_002885655.1| AAA-type ATPase family protein [Arabidopsis ...   114   3e-23
ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat...   114   3e-23
dbj|BAB02004.1| unnamed protein product [Arabidopsis thaliana]        114   3e-23

>ref|XP_002280965.1| PREDICTED: caseinolytic peptidase B protein homolog [Vitis
           vinifera] gi|297738825|emb|CBI28070.3| unnamed protein
           product [Vitis vinifera]
          Length = 484

 Score =  118 bits (295), Expect = 1e-24
 Identities = 88/250 (35%), Positives = 123/250 (49%), Gaps = 23/250 (9%)
 Frame = +3

Query: 3   KEMFLVEKRKALGLKISELRTPHIVFLGNPKAGKLEVARTVRRLINFLEILPTDKVTELR 182
           K M L E+RKALGLK+   + PH+ FLGNP  GK  VAR + RL++ + +LPTDKVTE++
Sbjct: 223 KGMLLDERRKALGLKVGSRKPPHMAFLGNPGTGKTMVARVLGRLLHMVGVLPTDKVTEVQ 282

Query: 183 NTN------------XXXXXXXXXXXXLFVDLLSEGRRL---------EYWLERIVRECM 299
            T+                        LFVD   E  RL         +Y LE +  E M
Sbjct: 283 RTDLVGEFVGHTGPKTRRKIKEAEGGILFVD---EAYRLIPMQKSDDKDYGLEAL-EEIM 338

Query: 300 SAIDSEKMVVILAGFN**GNEAFDFVKQGVKQKSNQIFRL**PQQCWTXXXXXXXXXXXX 479
           S +DS K+VVI AG++           +G  ++  + F                      
Sbjct: 339 SVMDSGKVVVIFAGYSEPMKRVIS-SNEGFCRRVTKFFHFGDFNSQELAKILNLKMNNQT 397

Query: 480 XXXXXLWIQLDPLCSVGAITKLIESEATEKQREELNG--VDHILADARQNLDFRLNLYTT 653
                   +L P CSV ++  LIE E TEKQR+E+NG  VD +L +AR+NLD RL+    
Sbjct: 398 EDSLLYGFRLHPSCSVDSVAALIERETTEKQRKEMNGGLVDPMLVNARENLDLRLSFECI 457

Query: 654 NVEELCTISV 683
           + +EL TI++
Sbjct: 458 DTDELLTITI 467


>gb|AAM62603.1| rubisco expression protein, putative [Arabidopsis thaliana]
          Length = 481

 Score =  115 bits (287), Expect = 1e-23
 Identities = 90/253 (35%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
 Frame = +3

Query: 3   KEMFLVEKRKALGLKISELRTPHIVFLGNPKAGKLEVARTVRRLINFLEILPTDKVTELR 182
           K M L E+R+ALGL I   R PH+ FLGNP  GK  VAR + +L+N + ILPTDKVTE++
Sbjct: 225 KGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQ 284

Query: 183 NTN------------XXXXXXXXXXXXLFVDLLSEGRRL---------EYWLERIVRECM 299
            T+                        LFVD   E  RL         +Y LE +  E M
Sbjct: 285 RTDLVGEFVGHTGPKTRRKIQEAEGGILFVD---EAYRLIPMQKADDKDYGLEAL-EEIM 340

Query: 300 SAIDSEKMVVILAGFN**GNEAFDFV---KQGVKQKSNQIFRL**PQQCWTXXXXXXXXX 470
           S ID+ K+VVI AG+    +E    V    +G  ++  + F                   
Sbjct: 341 SVIDTGKIVVIFAGY----SEPMKRVIASNEGFCRRVTKFFNFSDFSAKELAQILHIKMN 396

Query: 471 XXXXXXXXLWIQLDPLCSVGAITKLIESEATEKQREELNG--VDHILADARQNLDFRLNL 644
                      +L   C++  I  LIE+E TEKQR+E+NG  VD +L +AR+NLD RL+ 
Sbjct: 397 NQGEDTLFYGFRLHESCTLQEIASLIEAETTEKQRKEMNGGLVDTLLVNARENLDLRLSF 456

Query: 645 YTTNVEELCTISV 683
              + EE+CTI +
Sbjct: 457 ECVDTEEICTIKL 469


>ref|XP_002885655.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331495|gb|EFH61914.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 497

 Score =  114 bits (284), Expect = 3e-23
 Identities = 89/253 (35%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
 Frame = +3

Query: 3   KEMFLVEKRKALGLKISELRTPHIVFLGNPKAGKLEVARTVRRLINFLEILPTDKVTELR 182
           K M L E+R+ALGL I   R PH+ FLGNP  GK  VAR + +L+N + ILPTDKVTE++
Sbjct: 241 KGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQ 300

Query: 183 NTN------------XXXXXXXXXXXXLFVDLLSEGRRL---------EYWLERIVRECM 299
            T+                        LFVD   E  RL         +Y LE +  E M
Sbjct: 301 RTDLVGEFVGHTGPKTRRKIQEAEGGILFVD---EAYRLIPMQKADDKDYGLEAL-EEIM 356

Query: 300 SAIDSEKMVVILAGFN**GNEAFDFV---KQGVKQKSNQIFRL**PQQCWTXXXXXXXXX 470
           S +D+ K+VVI AG+    +E    V    +G  ++  + F                   
Sbjct: 357 SVMDTGKIVVIFAGY----SEPMKRVIASNEGFCRRVTKFFNFSDFSAKELAQILHIKMN 412

Query: 471 XXXXXXXXLWIQLDPLCSVGAITKLIESEATEKQREELNG--VDHILADARQNLDFRLNL 644
                      +L   C++  I  LIE+E TEKQR+E+NG  VD +L +AR+NLD RL+ 
Sbjct: 413 NQGEDTLFYGFRLHESCTLQEIASLIEAETTEKQRKEMNGGLVDTLLVNARENLDLRLSF 472

Query: 645 YTTNVEELCTISV 683
              + EE+CTI +
Sbjct: 473 ECVDTEEICTIKL 485


>ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat family protein
           [Arabidopsis thaliana]
           gi|13507553|gb|AAK28639.1|AF360342_1 putative rubisco
           expression protein [Arabidopsis thaliana]
           gi|15293291|gb|AAK93756.1| putative rubisco expression
           protein [Arabidopsis thaliana]
           gi|332643395|gb|AEE76916.1| AAA-type ATPase family
           protein / ankyrin repeat family protein [Arabidopsis
           thaliana]
          Length = 481

 Score =  114 bits (284), Expect = 3e-23
 Identities = 89/253 (35%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
 Frame = +3

Query: 3   KEMFLVEKRKALGLKISELRTPHIVFLGNPKAGKLEVARTVRRLINFLEILPTDKVTELR 182
           K M L E+R+ALGL I   R PH+ FLGNP  GK  VAR + +L+N + ILPTDKVTE++
Sbjct: 225 KGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQ 284

Query: 183 NTN------------XXXXXXXXXXXXLFVDLLSEGRRL---------EYWLERIVRECM 299
            T+                        LFVD   E  RL         +Y LE +  E M
Sbjct: 285 RTDLVGEFVGHTGPKTRRKIQEAEGGILFVD---EAYRLIPMQKADDKDYGLEAL-EEIM 340

Query: 300 SAIDSEKMVVILAGFN**GNEAFDFV---KQGVKQKSNQIFRL**PQQCWTXXXXXXXXX 470
           S +D+ K+VVI AG+    +E    V    +G  ++  + F                   
Sbjct: 341 SVMDTGKIVVIFAGY----SEPMKRVIASNEGFCRRVTKFFNFSDFSAKELAQILHIKMN 396

Query: 471 XXXXXXXXLWIQLDPLCSVGAITKLIESEATEKQREELNG--VDHILADARQNLDFRLNL 644
                      +L   C++  I  LIE+E TEKQR+E+NG  VD +L +AR+NLD RL+ 
Sbjct: 397 NQGEDTLFYGFRLHESCTLQEIASLIEAETTEKQRKEMNGGLVDTLLVNARENLDLRLSF 456

Query: 645 YTTNVEELCTISV 683
              + EE+CTI +
Sbjct: 457 ECVDTEEICTIKL 469


>dbj|BAB02004.1| unnamed protein product [Arabidopsis thaliana]
          Length = 468

 Score =  114 bits (284), Expect = 3e-23
 Identities = 89/253 (35%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
 Frame = +3

Query: 3   KEMFLVEKRKALGLKISELRTPHIVFLGNPKAGKLEVARTVRRLINFLEILPTDKVTELR 182
           K M L E+R+ALGL I   R PH+ FLGNP  GK  VAR + +L+N + ILPTDKVTE++
Sbjct: 212 KGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQ 271

Query: 183 NTN------------XXXXXXXXXXXXLFVDLLSEGRRL---------EYWLERIVRECM 299
            T+                        LFVD   E  RL         +Y LE +  E M
Sbjct: 272 RTDLVGEFVGHTGPKTRRKIQEAEGGILFVD---EAYRLIPMQKADDKDYGLEAL-EEIM 327

Query: 300 SAIDSEKMVVILAGFN**GNEAFDFV---KQGVKQKSNQIFRL**PQQCWTXXXXXXXXX 470
           S +D+ K+VVI AG+    +E    V    +G  ++  + F                   
Sbjct: 328 SVMDTGKIVVIFAGY----SEPMKRVIASNEGFCRRVTKFFNFSDFSAKELAQILHIKMN 383

Query: 471 XXXXXXXXLWIQLDPLCSVGAITKLIESEATEKQREELNG--VDHILADARQNLDFRLNL 644
                      +L   C++  I  LIE+E TEKQR+E+NG  VD +L +AR+NLD RL+ 
Sbjct: 384 NQGEDTLFYGFRLHESCTLQEIASLIEAETTEKQRKEMNGGLVDTLLVNARENLDLRLSF 443

Query: 645 YTTNVEELCTISV 683
              + EE+CTI +
Sbjct: 444 ECVDTEEICTIKL 456