BLASTX nr result

ID: Coptis25_contig00007560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007560
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]    60   1e-07
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]    59   4e-07
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    55   8e-06
emb|CAN60277.1| hypothetical protein VITISV_028254 [Vitis vinifera]    54   1e-05

>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
          Length = 631

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
 Frame = -2

Query: 274 YDSNYNAYITHTGANNHLTPDLNNLSISSEYAGQDKVVIGDGVN*T---CWKSLVHTPYS 104
           Y  ++ +++   GA++H+T DL+NLS+ + Y G D ++IGDG   +      S +HT ++
Sbjct: 7   YTPSHTSWLLDNGASHHVTTDLHNLSMHTPYNGSDDIMIGDGSGLSITHTGSSSLHTTHN 66

Query: 103 SFNLNHILPVPSLAQKLSSVT 41
           +F LN++L VP++ + L S++
Sbjct: 67  TFKLNNVLYVPTMKKNLISIS 87


>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
          Length = 1099

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -2

Query: 265 NYNAYITHTGANNHLTPDLNNLSISSEYAGQDKVVIGDGVN*T---CWKSLVHTPYSSFN 95
           N+ +++   GA++H T DL+NLS+ + Y G D ++IGDG   +      S +HT +++F 
Sbjct: 388 NHTSWLIDGGASHHATTDLHNLSMHTPYNGSDDIMIGDGSGLSITHIGSSSLHTTHNTFK 447

Query: 94  LNHILPVPSLAQKLSSVT 41
           LN++L VP++ + L S++
Sbjct: 448 LNNVLCVPTMKKNLISIS 465


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = -2

Query: 268 SNYNAYITHTGANNHLTPDLNNLSISSEYAGQDKVVIGDGVN--*TCWKSL-VHTPYSSF 98
           SN   ++  +GA++H+T DL+NLSI + Y G D ++I DG     T   SL +HT  + F
Sbjct: 228 SNTPTWLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGLPITHTGSLSLHTSNAQF 287

Query: 97  NLNHILPVPSLAQKLSSVTSL 35
           +L ++L VP + + L S++ L
Sbjct: 288 SLTNVLCVPGMKKNLISISKL 308


>emb|CAN60277.1| hypothetical protein VITISV_028254 [Vitis vinifera]
          Length = 372

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = -2

Query: 241 TGANNHLTPDLNNLSISSEYAGQDKVVIGDGVN*TCWKSLVHTPYSSFNLNHILPVPSLA 62
           TGA  H+TPDL++L  +S Y G+D+VVIG+GV+     +   +P  S  L  +L VP L 
Sbjct: 159 TGALAHMTPDLSHLDQASNYMGKDRVVIGNGVSLPITHTGTISPTPSLELLDVLVVPRLT 218

Query: 61  QKLSSVTSL 35
           + L S++ L
Sbjct: 219 KNLLSISKL 227


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