BLASTX nr result

ID: Coptis25_contig00007545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007545
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|1...   479   e-133
ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like prote...   466   e-129
ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus co...   453   e-125
gb|AFK46230.1| unknown [Lotus japonicus]                              453   e-125
ref|NP_191205.1| GroES-like zinc-binding alcohol dehydrogenase-l...   452   e-125

>ref|XP_002329219.1| predicted protein [Populus trichocarpa] gi|118487115|gb|ABK95387.1|
            unknown [Populus trichocarpa] gi|222871000|gb|EEF08131.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  479 bits (1232), Expect = e-133
 Identities = 247/352 (70%), Positives = 275/352 (78%), Gaps = 6/352 (1%)
 Frame = +3

Query: 81   MEALVCQKLGDXXXXXXXXXXXXXXXXXXXXK------LNSPTSVLVKVKATSLNYANYL 242
            MEALVC+KLGD                    K      L SPTSV V+VKATSLNYANYL
Sbjct: 1    MEALVCKKLGDPTALKSSISEADNDSPIILSKTHPIPQLKSPTSVRVRVKATSLNYANYL 60

Query: 243  QILGQYQEKPTLPFVPGSDYSGVIESVGAHVSKFKVGDRVCSFAALGTFAHFIVADQNDL 422
            QILG+YQEKP LPF+PGSDYSG++++VG+ VS  KVGDRVCSFAALG+FA FIVADQ +L
Sbjct: 61   QILGKYQEKPPLPFIPGSDYSGIVDAVGSGVSLLKVGDRVCSFAALGSFAEFIVADQAEL 120

Query: 423  FLIPDGCDLVTAGALPVAFGTSHVALVHRXXXXXXXXXXXXXXXXXXXXXXXXIGKVCGA 602
            F +PDGCDLV AGALPVAFGTSHVALVHR                        IGKVCGA
Sbjct: 121  FKVPDGCDLVAAGALPVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLSAVQIGKVCGA 180

Query: 603  VVIAVARGAEKVQFLKSLGVDHVVDLSKDSIIESVKGFLKARKLKGVDVLYDPVGGKPTK 782
            VVIAVARG EKVQFLKSLGVDHVVD SK+S+I SVK FLKARKLKGVDVLYDPVGGK TK
Sbjct: 181  VVIAVARGDEKVQFLKSLGVDHVVDSSKESVIASVKDFLKARKLKGVDVLYDPVGGKLTK 240

Query: 783  ESMKLLNWGAKILVIGFASGEVPTIPVNIALVKNWTIHGLYWGSHKIHNPALLEDSLKEL 962
            ESMKLLNWGA+ILVIGFASG+VP IP NIALVKNWT+HGLYWGS+KIH P +LEDS++EL
Sbjct: 241  ESMKLLNWGAQILVIGFASGDVPVIPANIALVKNWTVHGLYWGSYKIHRPVVLEDSIREL 300

Query: 963  LSWLARGLITINVSHVYGLSEANLAFAAIKERKAIGKVMIAFDDHNGVRSKL 1118
            LSW+A+G ITI++SH Y LSEA+LAFAAIK+RKAIGKVMI  DD   V+SKL
Sbjct: 301  LSWVAKGRITIHISHTYNLSEASLAFAAIKDRKAIGKVMITIDDERSVKSKL 352


>ref|XP_002267177.1| PREDICTED: quinone oxidoreductase-like protein 2 homolog [Vitis
            vinifera] gi|297736646|emb|CBI25517.3| unnamed protein
            product [Vitis vinifera]
          Length = 345

 Score =  466 bits (1198), Expect = e-129
 Identities = 238/346 (68%), Positives = 268/346 (77%)
 Frame = +3

Query: 81   MEALVCQKLGDXXXXXXXXXXXXXXXXXXXXKLNSPTSVLVKVKATSLNYANYLQILGQY 260
            MEALVC+K+GD                     LNSPT+V V+V+ATSLNYANYLQILG+Y
Sbjct: 1    MEALVCRKVGDPTLSDETSPISVSASHLIP-SLNSPTAVRVRVRATSLNYANYLQILGKY 59

Query: 261  QEKPTLPFVPGSDYSGVIESVGAHVSKFKVGDRVCSFAALGTFAHFIVADQNDLFLIPDG 440
            QEKP  PF+PGSDYSG++ESVG  VS FK+GD VCS AALG+FA +IV D+ +LF +PDG
Sbjct: 60   QEKPPHPFIPGSDYSGIVESVGPSVSMFKIGDTVCSVAALGSFAQYIVVDETELFRVPDG 119

Query: 441  CDLVTAGALPVAFGTSHVALVHRXXXXXXXXXXXXXXXXXXXXXXXXIGKVCGAVVIAVA 620
            CDLV A ALPVAFGTSHVALVHR                        IGKVCGA VIAVA
Sbjct: 120  CDLVAAAALPVAFGTSHVALVHRAQLTSAQVLLVLGAAGGVGLAAVQIGKVCGATVIAVA 179

Query: 621  RGAEKVQFLKSLGVDHVVDLSKDSIIESVKGFLKARKLKGVDVLYDPVGGKPTKESMKLL 800
            RGA KVQ LKSLGVDHVVD S +++ ESVK FLKA+KLKGVDVLYDPVGGK TKE+MKLL
Sbjct: 180  RGAGKVQILKSLGVDHVVDSSIENVTESVKNFLKAKKLKGVDVLYDPVGGKLTKETMKLL 239

Query: 801  NWGAKILVIGFASGEVPTIPVNIALVKNWTIHGLYWGSHKIHNPALLEDSLKELLSWLAR 980
            NWGA ILVIGFASGEVP IP NIALVKNWT+HGLYWGS++IH P +LEDS+KELLSWLAR
Sbjct: 240  NWGAHILVIGFASGEVPVIPANIALVKNWTVHGLYWGSYRIHRPGVLEDSMKELLSWLAR 299

Query: 981  GLITINVSHVYGLSEANLAFAAIKERKAIGKVMIAFDDHNGVRSKL 1118
            GLI I++SH Y LSEA+ AF+AIK+RKAIGKVMIAFDDH  VRSKL
Sbjct: 300  GLIEIHISHSYNLSEAHFAFSAIKDRKAIGKVMIAFDDHKTVRSKL 345


>ref|XP_002520899.1| quinone oxidoreductase, putative [Ricinus communis]
            gi|223540030|gb|EEF41608.1| quinone oxidoreductase,
            putative [Ricinus communis]
          Length = 344

 Score =  453 bits (1166), Expect = e-125
 Identities = 226/346 (65%), Positives = 272/346 (78%)
 Frame = +3

Query: 81   MEALVCQKLGDXXXXXXXXXXXXXXXXXXXXKLNSPTSVLVKVKATSLNYANYLQILGQY 260
            MEALVC++LGD                    +L+SPT+V V+VKATSLNYANYLQILG+Y
Sbjct: 1    MEALVCKRLGDPVEQNSPPIEITKNHPIP--QLDSPTAVRVRVKATSLNYANYLQILGKY 58

Query: 261  QEKPTLPFVPGSDYSGVIESVGAHVSKFKVGDRVCSFAALGTFAHFIVADQNDLFLIPDG 440
            QEKP LPF+PGSDYSG++++V  +VS FKVGDRVCSFA+LG+FA FIVADQ+ L+ +P+G
Sbjct: 59   QEKPPLPFIPGSDYSGIVDAVAPNVSAFKVGDRVCSFASLGSFAQFIVADQSQLYPVPEG 118

Query: 441  CDLVTAGALPVAFGTSHVALVHRXXXXXXXXXXXXXXXXXXXXXXXXIGKVCGAVVIAVA 620
            CDLV A ALPVAFGTSHVALVHR                        IGKVCGA+++AV 
Sbjct: 119  CDLVAAAALPVAFGTSHVALVHRAHLTSSQVLLVLGAAGGVGLSAVQIGKVCGAIIVAVV 178

Query: 621  RGAEKVQFLKSLGVDHVVDLSKDSIIESVKGFLKARKLKGVDVLYDPVGGKPTKESMKLL 800
            RG EKV+ LKSLGVDHVVD SK+++I SVK FL ++KLKGVDVLYDPVGGK TK+S+KLL
Sbjct: 179  RGFEKVELLKSLGVDHVVDSSKENVIASVKDFLLSKKLKGVDVLYDPVGGKLTKDSLKLL 238

Query: 801  NWGAKILVIGFASGEVPTIPVNIALVKNWTIHGLYWGSHKIHNPALLEDSLKELLSWLAR 980
            NWGA+ILVIGFASGE+P IP NIALVKNWTIHGLYWGS++IH P +LEDSL+ELLSW+A+
Sbjct: 239  NWGAQILVIGFASGEIPVIPANIALVKNWTIHGLYWGSYRIHRPGVLEDSLRELLSWMAK 298

Query: 981  GLITINVSHVYGLSEANLAFAAIKERKAIGKVMIAFDDHNGVRSKL 1118
            G ITI++SH Y L+EA+LAF+AI++RKAIGKVMIAFD    + SKL
Sbjct: 299  GQITIHISHTYSLAEASLAFSAIRDRKAIGKVMIAFDGGRSMTSKL 344


>gb|AFK46230.1| unknown [Lotus japonicus]
          Length = 346

 Score =  453 bits (1165), Expect = e-125
 Identities = 228/347 (65%), Positives = 267/347 (76%), Gaps = 1/347 (0%)
 Frame = +3

Query: 81   MEALVCQKLGDXXXXXXXXXXXXXXXXXXXX-KLNSPTSVLVKVKATSLNYANYLQILGQ 257
            MEALVC+KLGD                     +L+SPTSV VK+KATSLN+ANYLQILG+
Sbjct: 1    MEALVCKKLGDPTLGLEDNNTPIILSKNHPIPQLDSPTSVRVKIKATSLNFANYLQILGK 60

Query: 258  YQEKPTLPFVPGSDYSGVIESVGAHVSKFKVGDRVCSFAALGTFAHFIVADQNDLFLIPD 437
            YQEKPTLPF+PGSDYSG++++VG+ V  F+VGD VCSF ALG+FA ++V D+  LF +PD
Sbjct: 61   YQEKPTLPFIPGSDYSGIVDAVGSKVESFRVGDPVCSFIALGSFAEYLVVDETQLFRVPD 120

Query: 438  GCDLVTAGALPVAFGTSHVALVHRXXXXXXXXXXXXXXXXXXXXXXXXIGKVCGAVVIAV 617
            GCDLV+AGAL VAFGTSHVALVHR                        IGK CGA+VIAV
Sbjct: 121  GCDLVSAGALAVAFGTSHVALVHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAV 180

Query: 618  ARGAEKVQFLKSLGVDHVVDLSKDSIIESVKGFLKARKLKGVDVLYDPVGGKPTKESMKL 797
            ARGAEKVQ LKS GVDHVVDL+ +++ ESVK FLKARKLKG+DVLYDPVGGK TKE ++L
Sbjct: 181  ARGAEKVQLLKSHGVDHVVDLTNENVTESVKEFLKARKLKGIDVLYDPVGGKLTKECLRL 240

Query: 798  LNWGAKILVIGFASGEVPTIPVNIALVKNWTIHGLYWGSHKIHNPALLEDSLKELLSWLA 977
            L WGA IL+IGFASGE+P IP NIALVKNWT+HGLYWGS+KIH P +LEDSLKELLSWLA
Sbjct: 241  LKWGANILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPRVLEDSLKELLSWLA 300

Query: 978  RGLITINVSHVYGLSEANLAFAAIKERKAIGKVMIAFDDHNGVRSKL 1118
            RG+I++++SH Y LSEANLAF AIK+RK IGKVMI FD+    RSKL
Sbjct: 301  RGMISVHISHSYPLSEANLAFGAIKDRKVIGKVMIVFDE-KSTRSKL 346


>ref|NP_191205.1| GroES-like zinc-binding alcohol dehydrogenase-like protein
            [Arabidopsis thaliana] gi|7594524|emb|CAB88049.1| quinone
            reductase-like protein [Arabidopsis thaliana]
            gi|24030344|gb|AAN41337.1| putative quinone reductase
            [Arabidopsis thaliana] gi|62320240|dbj|BAD94498.1|
            quinone reductase-like protein [Arabidopsis thaliana]
            gi|332646003|gb|AEE79524.1| GroES-like zinc-binding
            alcohol dehydrogenase-like protein [Arabidopsis thaliana]
          Length = 348

 Score =  452 bits (1163), Expect = e-125
 Identities = 228/348 (65%), Positives = 266/348 (76%), Gaps = 2/348 (0%)
 Frame = +3

Query: 81   MEALVCQKLGDXXXXXXXXXXXXXXXXXXXX--KLNSPTSVLVKVKATSLNYANYLQILG 254
            MEALVC+KLGD                       LNS TSV V+V ATSLNYANYLQILG
Sbjct: 1    MEALVCRKLGDPTATNPGSPESPVEVSKTHPIPSLNSDTSVRVRVIATSLNYANYLQILG 60

Query: 255  QYQEKPTLPFVPGSDYSGVIESVGAHVSKFKVGDRVCSFAALGTFAHFIVADQNDLFLIP 434
            +YQEKP LPF+PGSDYSG+++++G  V+KF+VGDRVCSFA LG+FA FIVADQ+ LFL+P
Sbjct: 61   KYQEKPPLPFIPGSDYSGIVDAIGPAVTKFRVGDRVCSFADLGSFAQFIVADQSRLFLVP 120

Query: 435  DGCDLVTAGALPVAFGTSHVALVHRXXXXXXXXXXXXXXXXXXXXXXXXIGKVCGAVVIA 614
            + CD+V A ALPVAFGTSHVALVHR                        IGKVCGA+VIA
Sbjct: 121  ERCDMVAAAALPVAFGTSHVALVHRARLTSGQVLLVLGAAGGVGLAAVQIGKVCGAIVIA 180

Query: 615  VARGAEKVQFLKSLGVDHVVDLSKDSIIESVKGFLKARKLKGVDVLYDPVGGKPTKESMK 794
            VARG EK+Q LKS+GVDHVVDL  +++I SVK F+K RKLKGVDVLYDPVGGK TKESMK
Sbjct: 181  VARGTEKIQLLKSMGVDHVVDLGTENVISSVKEFIKTRKLKGVDVLYDPVGGKLTKESMK 240

Query: 795  LLNWGAKILVIGFASGEVPTIPVNIALVKNWTIHGLYWGSHKIHNPALLEDSLKELLSWL 974
            +L WGA+ILVIGFASGE+P IP NIALVKNWT+HGLYWGS++IH P +LEDS+KELLSWL
Sbjct: 241  VLKWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYRIHQPNVLEDSIKELLSWL 300

Query: 975  ARGLITINVSHVYGLSEANLAFAAIKERKAIGKVMIAFDDHNGVRSKL 1118
            +RGLITI++SH Y LS+ANLAF  +K+RKAIGKVMIA D    + SKL
Sbjct: 301  SRGLITIHISHTYSLSQANLAFGDLKDRKAIGKVMIALDHKTALSSKL 348


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