BLASTX nr result

ID: Coptis25_contig00007540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007540
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20922.3| unnamed protein product [Vitis vinifera]              130   4e-28
ref|XP_003603597.1| hypothetical protein MTR_3g109470 [Medicago ...   120   3e-25
ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|2...   116   5e-24
emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]   114   3e-23
ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus c...   109   6e-22

>emb|CBI20922.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  130 bits (326), Expect = 4e-28
 Identities = 67/99 (67%), Positives = 77/99 (77%)
 Frame = +2

Query: 2   LMLPNGRPLVASMGTPPSLTEKRSTFIGHLVIDKTKSVMQREEHKQAVSTSHCSQPNTIE 181
           L+L NGRPLV S GTP     K+STF+GHL IDK K  MQRE  KQAVSTSHCSQPNTIE
Sbjct: 532 LLLSNGRPLVGSFGTP-CFPGKQSTFVGHLSIDKVKVQMQREM-KQAVSTSHCSQPNTIE 589

Query: 182 YDMAMEWCLLQTRSDSTWQDLYMQHGAELKKLQDTLKSK 298
           Y+MAM+WCL Q RSDS W+ LY + G EL+KL+ +LKSK
Sbjct: 590 YEMAMDWCLQQERSDSCWKKLYKRQGDELRKLKASLKSK 628


>ref|XP_003603597.1| hypothetical protein MTR_3g109470 [Medicago truncatula]
           gi|355492645|gb|AES73848.1| hypothetical protein
           MTR_3g109470 [Medicago truncatula]
          Length = 672

 Score =  120 bits (301), Expect = 3e-25
 Identities = 58/98 (59%), Positives = 71/98 (72%)
 Frame = +2

Query: 5   MLPNGRPLVASMGTPPSLTEKRSTFIGHLVIDKTKSVMQREEHKQAVSTSHCSQPNTIEY 184
           ++ NGRPLV S G  P + EK+ TF GH VID+ +   QRE  K A+STSHCSQPN IEY
Sbjct: 575 LMSNGRPLVGSFGRLPCIPEKKPTFYGHHVIDQLRLQTQREM-KDAISTSHCSQPNNIEY 633

Query: 185 DMAMEWCLLQTRSDSTWQDLYMQHGAELKKLQDTLKSK 298
           DMA+EWCLLQ R+D +W+ LY + G EL KL+  LKSK
Sbjct: 634 DMAVEWCLLQERADKSWRKLYQRQGGELSKLKAKLKSK 671


>ref|XP_002324251.1| predicted protein [Populus trichocarpa] gi|222865685|gb|EEF02816.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score =  116 bits (291), Expect = 5e-24
 Identities = 63/99 (63%), Positives = 72/99 (72%)
 Frame = +2

Query: 2   LMLPNGRPLVASMGTPPSLTEKRSTFIGHLVIDKTKSVMQREEHKQAVSTSHCSQPNTIE 181
           LML NGRPLV S+  P     K+STF GHL I+K +  MQRE  K+AVSTSHCSQPNT+E
Sbjct: 446 LMLSNGRPLVGSIAAP-CFPGKQSTFFGHLTINKLRIHMQREM-KEAVSTSHCSQPNTLE 503

Query: 182 YDMAMEWCLLQTRSDSTWQDLYMQHGAELKKLQDTLKSK 298
           YDMAMEWCLLQ RSD   + L  Q   EL+KL+ TLKSK
Sbjct: 504 YDMAMEWCLLQDRSDLALRKLRQQQEQELRKLRATLKSK 542


>emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]
          Length = 417

 Score =  114 bits (284), Expect = 3e-23
 Identities = 58/82 (70%), Positives = 64/82 (78%)
 Frame = +2

Query: 2   LMLPNGRPLVASMGTPPSLTEKRSTFIGHLVIDKTKSVMQREEHKQAVSTSHCSQPNTIE 181
           L+L NGRPLV S GTP     K+STF+GHL IDK K  MQRE  KQAVSTSHCSQPNTIE
Sbjct: 287 LLLSNGRPLVGSFGTP-CFPGKQSTFVGHLSIDKVKVQMQREM-KQAVSTSHCSQPNTIE 344

Query: 182 YDMAMEWCLLQTRSDSTWQDLY 247
           Y+MAM+WCL Q RSDS W+ LY
Sbjct: 345 YEMAMDWCLQQERSDSCWKKLY 366


>ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus communis]
           gi|223544403|gb|EEF45924.1| hypothetical protein
           RCOM_0803370 [Ricinus communis]
          Length = 730

 Score =  109 bits (273), Expect = 6e-22
 Identities = 56/96 (58%), Positives = 69/96 (71%)
 Frame = +2

Query: 2   LMLPNGRPLVASMGTPPSLTEKRSTFIGHLVIDKTKSVMQREEHKQAVSTSHCSQPNTIE 181
           LM   GRPLV S+    S   K ST+ GH+ IDKT+  MQR   ++AVSTSHCSQPNTIE
Sbjct: 632 LMTSYGRPLVGSIAKL-SFPGKPSTYFGHMSIDKTRHQMQRVM-REAVSTSHCSQPNTIE 689

Query: 182 YDMAMEWCLLQTRSDSTWQDLYMQHGAELKKLQDTL 289
           YDMA+EWC LQ +++  W+ LY QHG EL+KL+ TL
Sbjct: 690 YDMALEWCFLQEQTNQEWELLYKQHGKELRKLESTL 725