BLASTX nr result
ID: Coptis25_contig00007531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007531 (1884 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i... 110 1e-21 ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu... 110 1e-21 ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i... 110 1e-21 emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera] 110 1e-21 ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-19 >ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis vinifera] Length = 447 Score = 110 bits (275), Expect = 1e-21 Identities = 61/126 (48%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Frame = +2 Query: 1517 YGLRQYMCTQMQNRPGSHNLIPPVSHRSAFRVISPDLLPGIGPRNSVTVPFGSCLGPAHP 1696 YGL QY MQ++ HN+IP V+ SA R I+PDL + PRN VP S +G A+P Sbjct: 246 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 304 Query: 1697 PEPGPWYPVAYPGRIISPRPI--SRGFTPPEIMSSRGTFQT--SVSSGAQVEGPPGANLF 1864 PG YP+AY G I+S +P+ S G PP +M+S + SSG QVEGPPGANLF Sbjct: 305 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 364 Query: 1865 VSNIPQ 1882 + +IPQ Sbjct: 365 IYHIPQ 370 >ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis] gi|223540085|gb|EEF41662.1| RNA binding protein, putative [Ricinus communis] Length = 436 Score = 110 bits (275), Expect = 1e-21 Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 5/128 (3%) Frame = +2 Query: 1514 TYGLRQYMCTQMQNRPGSHNLIPPVSHRSAFRV-ISPDLLPGIGPRNSVTVPFGSCLGPA 1690 TYGL Y +Q++P H++IPPV+ +A R + PDL P +GPRN +P S +G A Sbjct: 234 TYGLMPYRLPPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRN-YALPPASYVGSA 292 Query: 1691 HPPEPGPWYPVAYPGRIISPRPISR--GFTPPEIMSSRGTFQTSV--SSGAQVEGPPGAN 1858 +P PG YP+AYPG ++SPRP+S G P + SS + V SSG Q+EGPPG+N Sbjct: 293 YPAVPGIQYPMAYPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSN 352 Query: 1859 LFVSNIPQ 1882 LF+ +IPQ Sbjct: 353 LFIYHIPQ 360 >ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis vinifera] gi|296086641|emb|CBI32276.3| unnamed protein product [Vitis vinifera] Length = 437 Score = 110 bits (275), Expect = 1e-21 Identities = 61/126 (48%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Frame = +2 Query: 1517 YGLRQYMCTQMQNRPGSHNLIPPVSHRSAFRVISPDLLPGIGPRNSVTVPFGSCLGPAHP 1696 YGL QY MQ++ HN+IP V+ SA R I+PDL + PRN VP S +G A+P Sbjct: 236 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 294 Query: 1697 PEPGPWYPVAYPGRIISPRPI--SRGFTPPEIMSSRGTFQT--SVSSGAQVEGPPGANLF 1864 PG YP+AY G I+S +P+ S G PP +M+S + SSG QVEGPPGANLF Sbjct: 295 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 354 Query: 1865 VSNIPQ 1882 + +IPQ Sbjct: 355 IYHIPQ 360 >emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera] Length = 450 Score = 110 bits (275), Expect = 1e-21 Identities = 61/126 (48%), Positives = 78/126 (61%), Gaps = 4/126 (3%) Frame = +2 Query: 1517 YGLRQYMCTQMQNRPGSHNLIPPVSHRSAFRVISPDLLPGIGPRNSVTVPFGSCLGPAHP 1696 YGL QY MQ++ HN+IP V+ SA R I+PDL + PRN VP S +G A+P Sbjct: 290 YGLMQYRMPPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRN-YAVPSASYMGSAYP 348 Query: 1697 PEPGPWYPVAYPGRIISPRPI--SRGFTPPEIMSSRGTFQT--SVSSGAQVEGPPGANLF 1864 PG YP+AY G I+S +P+ S G PP +M+S + SSG QVEGPPGANLF Sbjct: 349 ALPGLQYPMAYHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGANLF 408 Query: 1865 VSNIPQ 1882 + +IPQ Sbjct: 409 IYHIPQ 414 >ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1| predicted protein [Populus trichocarpa] Length = 432 Score = 103 bits (258), Expect = 1e-19 Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 5/127 (3%) Frame = +2 Query: 1517 YGLRQYMCTQMQNRPGSHNLIPPVSHRSAFRV-ISPDLLPGIGPRNSVTVPFGSCLGPAH 1693 YGL Y MQN+P H+++PPV+ + R I PDL P I PRN + +G A+ Sbjct: 234 YGLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYAPATY---MGSAY 290 Query: 1694 PPEPGPWYPVAYPGRIISPRPISR--GFTPPEIMSSRGTFQTSV--SSGAQVEGPPGANL 1861 P G YPVAYPG +++ RP+S G P ++SS + V SSG QVEGPPGANL Sbjct: 291 PTVTGLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGANL 350 Query: 1862 FVSNIPQ 1882 F+ +IPQ Sbjct: 351 FIYHIPQ 357