BLASTX nr result

ID: Coptis25_contig00007522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007522
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|22353...    71   8e-11
ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
emb|CBI20151.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|NP_001238159.1| receptor-like serine/threonine kinase [Glyci...    62   6e-08
ref|XP_002283464.1| PREDICTED: probable LRR receptor-like serine...    62   6e-08

>ref|XP_002524510.1| kinase, putative [Ricinus communis] gi|223536184|gb|EEF37837.1|
           kinase, putative [Ricinus communis]
          Length = 897

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/62 (56%), Positives = 44/62 (70%)
 Frame = -1

Query: 203 SFNRLTGVILETLARLTKLQLMFLTNNTLTGQISPWISRLSGTRHNFDISYNNFTGTSES 24
           SFNRLTG I ++L  L  +  MFLTNN+LTG+I  WI R   T  N+D+SYNNFTGT  +
Sbjct: 316 SFNRLTGSIPDSLQSLEAIDYMFLTNNSLTGEIPSWILR---TSKNYDLSYNNFTGTVST 372

Query: 23  NC 18
           +C
Sbjct: 373 SC 374


>ref|XP_002316847.1| predicted protein [Populus trichocarpa] gi|222859912|gb|EEE97459.1|
           predicted protein [Populus trichocarpa]
          Length = 1015

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = -1

Query: 203 SFNRLTGVILETLARLTKLQLMFLTNNTLTGQISPWISRLSGTRHNFDISYNNFTGTSES 24
           SFN+ TG I  +L  L KL+ MFL NN LTG++  WI     +++  D+SYNNFTG+++S
Sbjct: 321 SFNKFTGQIPVSLESLAKLRFMFLNNNLLTGEVPGWI---LNSKNELDLSYNNFTGSTQS 377

Query: 23  NC 18
           +C
Sbjct: 378 SC 379


>emb|CBI20151.3| unnamed protein product [Vitis vinifera]
          Length = 1063

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -1

Query: 203 SFNRLTGVILETLAR----LTKLQLMFLTNNTLTGQISPWISRLSGTRHNFDISYNNFTG 36
           SFNRL G I E+         KL  MFLTNN+LTG++  WIS  S T++N D+SYNNFTG
Sbjct: 350 SFNRLNGKIPESFKEEKEDRAKLNFMFLTNNSLTGEVPNWIS--SDTKNNIDLSYNNFTG 407


>ref|NP_001238159.1| receptor-like serine/threonine kinase [Glycine max]
           gi|212717161|gb|ACJ37422.1| receptor-like
           serine/threonine kinase [Glycine max]
          Length = 1321

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = -1

Query: 203 SFNRLTGVILETLARLTKLQLMFLTNNTLTGQISPWISRLSGTRHNFDISYNNFTGTSES 24
           S N LTG I +T   L KL  +FLTNN+L+G+I  WI  +   + N D+S NNFT TS S
Sbjct: 621 SSNMLTGTIPDTFQDLGKLNYLFLTNNSLSGRIPDWILSI---KQNIDLSLNNFTETSAS 677

Query: 23  NC 18
           NC
Sbjct: 678 NC 679


>ref|XP_002283464.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Vitis vinifera]
          Length = 1018

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
 Frame = -1

Query: 203 SFNRLTGVILETLAR----LTKLQLMFLTNNTLTGQISPWISRLSGTRHNFDISYNNFTG 36
           SFNRL G I E+         KL  MFLTNN+LTG++  WIS  S T++N D+SYNNFTG
Sbjct: 305 SFNRLNGKIPESFKEEKEDRAKLNFMFLTNNSLTGEVPNWIS--SDTKNNIDLSYNNFTG 362


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