BLASTX nr result
ID: Coptis25_contig00007520
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007520 (984 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis v... 290 3e-76 ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis... 290 3e-76 ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [... 288 2e-75 ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cu... 285 2e-74 ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like i... 283 3e-74 >ref|XP_002274975.1| PREDICTED: 60S ribosomal protein L4 [Vitis vinifera] Length = 406 Score = 290 bits (743), Expect = 3e-76 Identities = 153/223 (68%), Positives = 162/223 (72%) Frame = -3 Query: 982 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 803 DAEKAKDS IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANV+RLNL Sbjct: 184 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVDRLNL 243 Query: 802 LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 623 LKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKK GY+LPRSKMVNADL+RIINSDE Sbjct: 244 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKTSEKKNGYLLPRSKMVNADLARIINSDE 303 Query: 622 VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 443 VQSVVRPI EVKRAPM PYAKT Sbjct: 304 VQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKQEKLDKK 363 Query: 442 XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 314 AWYQTMISDSDYTEFDNFSKWLGVSQ Sbjct: 364 RKQIPKEEVAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406 >ref|XP_002285741.1| PREDICTED: 60S ribosomal protein L4-1 [Vitis vinifera] Length = 405 Score = 290 bits (743), Expect = 3e-76 Identities = 154/223 (69%), Positives = 162/223 (72%) Frame = -3 Query: 982 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 803 DAEKAKDS IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVEVANVERLNL Sbjct: 183 DAEKAKDSHGIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEVANVERLNL 242 Query: 802 LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 623 LKLAPGGHLGRFIIWTKSA EK+DSIYGSFDK SEKKKGY+LPR+KMVNADL+RIINSDE Sbjct: 243 LKLAPGGHLGRFIIWTKSAIEKVDSIYGSFDKTSEKKKGYLLPRAKMVNADLARIINSDE 302 Query: 622 VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 443 VQSVVRPI EVKRAPM PYAKT Sbjct: 303 VQSVVRPIKKEVKRAPMKKNPLKNLNTMLKLNPYAKTARRMALLAEAQRVKAKKEKLDKK 362 Query: 442 XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 314 AWYQTMISDSDYTEFDNFSKWLGVSQ Sbjct: 363 RAQIPKEEAAAIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 405 >ref|XP_003542496.1| PREDICTED: 60S ribosomal protein L4-1-like [Glycine max] Length = 405 Score = 288 bits (736), Expect = 2e-75 Identities = 149/223 (66%), Positives = 161/223 (72%) Frame = -3 Query: 982 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 803 DAEKAKDS IRPGKGKMRNRRY+S++GPL+VYGTEG+K VKAFRN+PGVEVANVERLNL Sbjct: 183 DAEKAKDSRSIRPGKGKMRNRRYISRRGPLVVYGTEGAKAVKAFRNVPGVEVANVERLNL 242 Query: 802 LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 623 LKLAPGGHLGRF+IWTKSAFEKLDSIYGSFDKPSEKKKGY+LPRSKMVN+DLSRIINSDE Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRSKMVNSDLSRIINSDE 302 Query: 622 VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 443 VQSVVRPI +VKRA + PYAKT Sbjct: 303 VQSVVRPIKKDVKRATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKVKKEKLDKK 362 Query: 442 XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 314 AWY TM+SDSDYTEFDNFSKWLGVSQ Sbjct: 363 RKTVSKEEASAIKAAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405 >ref|XP_004142108.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus] gi|449520008|ref|XP_004167026.1| PREDICTED: 60S ribosomal protein L4-like [Cucumis sativus] Length = 405 Score = 285 bits (728), Expect = 2e-74 Identities = 150/223 (67%), Positives = 160/223 (71%) Frame = -3 Query: 982 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 803 DAEKAKDS IRPGKGKMRNRRY+S+KGPLIVYGTEG+K+VKAFRNIPGVE+ANVERLNL Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242 Query: 802 LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 623 LKLAPGGHLGRF+IWTKSAFEKLDSIYGSF+K SEKKKGYVLPRSKMVNADLSRIINSDE Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKSSEKKKGYVLPRSKMVNADLSRIINSDE 302 Query: 622 VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 443 VQSVV+PI VKR + PYAKT Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362 Query: 442 XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 314 AWYQTMISDSDYTEF+NFSKWLGVSQ Sbjct: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405 >ref|XP_003537248.1| PREDICTED: 60S ribosomal protein L4-1-like isoform 1 [Glycine max] Length = 405 Score = 283 bits (725), Expect = 3e-74 Identities = 146/223 (65%), Positives = 160/223 (71%) Frame = -3 Query: 982 DAEKAKDSEKIRPGKGKMRNRRYVSKKGPLIVYGTEGSKIVKAFRNIPGVEVANVERLNL 803 DAEKAKDS IRPGKGKMRNRRY+S++GPLIVYGTEG+K VKAFRN+PGVEVANVERLNL Sbjct: 183 DAEKAKDSRSIRPGKGKMRNRRYISRRGPLIVYGTEGAKAVKAFRNVPGVEVANVERLNL 242 Query: 802 LKLAPGGHLGRFIIWTKSAFEKLDSIYGSFDKPSEKKKGYVLPRSKMVNADLSRIINSDE 623 LKLAPGGHLGRF++WTKSAFEKLDSIYGSFDKPSEKKKGY+LPR KMVN+DL+RIINSDE Sbjct: 243 LKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKPSEKKKGYLLPRPKMVNSDLARIINSDE 302 Query: 622 VQSVVRPINNEVKRAPMXXXXXXXXXXXXXXXPYAKTXXXXXXXXXXXXXXXXXXXXXXX 443 VQSVVRPI +VK+A + PYAKT Sbjct: 303 VQSVVRPIKKDVKKATLKKNPLKNLNSMLKLNPYAKTAKRMALLAEAQRVKAKKEKLDKK 362 Query: 442 XXXXXXXXXXXXXXXXXAWYQTMISDSDYTEFDNFSKWLGVSQ 314 AWY TM+SDSDYTEFDNFSKWLGVSQ Sbjct: 363 RKTVSKEEASAIKSAGKAWYHTMVSDSDYTEFDNFSKWLGVSQ 405