BLASTX nr result

ID: Coptis25_contig00007509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007509
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   189   6e-46
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   177   4e-42
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   166   6e-39
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              166   6e-39
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38

>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  189 bits (481), Expect = 6e-46
 Identities = 86/170 (50%), Positives = 122/170 (71%)
 Frame = +1

Query: 445 KQIHIFHNFTRRGSALALVVALFSISTLPLQSLSDLSPNFFVGLLKALVPMEFTNIYMMG 624
           +++  F+ FTR  + +  +V + S+S LPL S  DLSP FFVGLLK ++P+   NIY++G
Sbjct: 19  RKVDAFYRFTRPHTIIGSIVGITSVSLLPLVSFEDLSPAFFVGLLKVMIPIVCVNIYVVG 78

Query: 625 LNQLYDIRSDKINKPTLPLASGELSVVAGITIVAISGILGIALAVMFKSPSVLYGVLAWM 804
           LNQLYD+  DK+NKP LP+ASGE S+  G  IV+  G++ I + +MF+SP VLY +L   
Sbjct: 79  LNQLYDVEIDKVNKPNLPIASGEYSMETGKAIVSAFGLMSIIMGIMFQSPPVLYCLLVCF 138

Query: 805 FFTSVYSTDLPLLRWKQNQFLSLLCLVCIRGLTIPITVFSHVQTYVLGRP 954
           FF + YS D+PL RWK+N FL+ +C+V +R +T+ +TVF H+Q YVLGRP
Sbjct: 139 FFGTAYSIDVPLFRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQYVLGRP 188


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  177 bits (448), Expect = 4e-42
 Identities = 81/170 (47%), Positives = 118/170 (69%)
 Frame = +1

Query: 445 KQIHIFHNFTRRGSALALVVALFSISTLPLQSLSDLSPNFFVGLLKALVPMEFTNIYMMG 624
           ++I  F+ F+R  + +  ++ + S+S LPL S+ DLSP FFVG LKAL+P  F NIY++G
Sbjct: 103 RKIDAFYRFSRPHTIIGTIIGITSVSLLPLTSIGDLSPAFFVGYLKALIPSIFMNIYVVG 162

Query: 625 LNQLYDIRSDKINKPTLPLASGELSVVAGITIVAISGILGIALAVMFKSPSVLYGVLAWM 804
           LNQL+D+  DK+NKP LPLASGE S+  G  IV+  G++  A+ ++F+SP V + +L   
Sbjct: 163 LNQLFDVEIDKVNKPNLPLASGEYSMGLGKAIVSAFGLMSFAMGIVFQSPPVFFALLICF 222

Query: 805 FFTSVYSTDLPLLRWKQNQFLSLLCLVCIRGLTIPITVFSHVQTYVLGRP 954
            F S YS +LPLLRWK+N FL+   ++ +R +T+ +  F H+Q YVLGRP
Sbjct: 223 LFGSAYSVELPLLRWKRNAFLAAFSILMVRAITVNLAFFYHIQKYVLGRP 272


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  166 bits (421), Expect = 6e-39
 Identities = 78/181 (43%), Positives = 121/181 (66%)
 Frame = +1

Query: 409 PEKPISWWTKISKQIHIFHNFTRRGSALALVVALFSISTLPLQSLSDLSPNFFVGLLKAL 588
           P KP      +SKQ+  F+ F+R  + +  V+ + S+S LPL+++SDLSP FFVGLLKA+
Sbjct: 88  PSKPEDQ-NHVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAM 146

Query: 589 VPMEFTNIYMMGLNQLYDIRSDKINKPTLPLASGELSVVAGITIVAISGILGIALAVMFK 768
           VP    NIY++GLNQ++D+  DK+NKP LPLASG+ S+  G  IV IS ++ + + +MF+
Sbjct: 147 VPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQ 206

Query: 769 SPSVLYGVLAWMFFTSVYSTDLPLLRWKQNQFLSLLCLVCIRGLTIPITVFSHVQTYVLG 948
           SP +   +L      + YS ++PLLRWK+   L+  C++ +R + + +  F+H+Q +VLG
Sbjct: 207 SPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLG 266

Query: 949 R 951
           R
Sbjct: 267 R 267


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  166 bits (421), Expect = 6e-39
 Identities = 78/181 (43%), Positives = 121/181 (66%)
 Frame = +1

Query: 409 PEKPISWWTKISKQIHIFHNFTRRGSALALVVALFSISTLPLQSLSDLSPNFFVGLLKAL 588
           P KP      +SKQ+  F+ F+R  + +  V+ + S+S LPL+++SDLSP FFVGLLKA+
Sbjct: 64  PSKPEDQ-NHVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAM 122

Query: 589 VPMEFTNIYMMGLNQLYDIRSDKINKPTLPLASGELSVVAGITIVAISGILGIALAVMFK 768
           VP    NIY++GLNQ++D+  DK+NKP LPLASG+ S+  G  IV IS ++ + + +MF+
Sbjct: 123 VPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQ 182

Query: 769 SPSVLYGVLAWMFFTSVYSTDLPLLRWKQNQFLSLLCLVCIRGLTIPITVFSHVQTYVLG 948
           SP +   +L      + YS ++PLLRWK+   L+  C++ +R + + +  F+H+Q +VLG
Sbjct: 183 SPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLG 242

Query: 949 R 951
           R
Sbjct: 243 R 243


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  162 bits (411), Expect = 8e-38
 Identities = 73/167 (43%), Positives = 115/167 (68%)
 Frame = +1

Query: 451 IHIFHNFTRRGSALALVVALFSISTLPLQSLSDLSPNFFVGLLKALVPMEFTNIYMMGLN 630
           +H F+ F+R  + +  ++ + S+S LP++++S+LSP FF+GLLKALVP    NIY++GLN
Sbjct: 1   LHSFYQFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLN 60

Query: 631 QLYDIRSDKINKPTLPLASGELSVVAGITIVAISGILGIALAVMFKSPSVLYGVLAWMFF 810
           QL+D+  DK+NKP LPLASG+ S+  G+ IV+ S +   A+ +MF+SP +   +L     
Sbjct: 61  QLFDVEIDKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVL 120

Query: 811 TSVYSTDLPLLRWKQNQFLSLLCLVCIRGLTIPITVFSHVQTYVLGR 951
            SVYS +LP LRWK+  FL+  C++ +R + + +  F H+Q +VLG+
Sbjct: 121 GSVYSIELPFLRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGK 167


Top