BLASTX nr result
ID: Coptis25_contig00007503
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007503 (1338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o... 497 e-138 ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o... 490 e-136 ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o... 488 e-135 ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P... 488 e-135 ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R... 486 e-135 >ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Vitis vinifera] gi|297745621|emb|CBI40786.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 497 bits (1279), Expect = e-138 Identities = 235/306 (76%), Positives = 260/306 (84%) Frame = -2 Query: 1232 FGYRLLSKXXXXXXXXXXXXXXXXTCRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQ 1053 + +RL SK C+ASWQELAGVL+FSAIPFTAVKAIANS LG +LQ Sbjct: 20 YRHRLCSKISWPKSRNVNSTSTYSGCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQ 79 Query: 1052 KRLMETKASAVLNSSNFNASAQKAREYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGF 873 R+ E K +AV NSS F A A+KA+ S WYG+ERPRWLGPIPYDYPAYLTGELPGDYGF Sbjct: 80 SRMEENKKAAVKNSSKFKALAEKAKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGF 139 Query: 872 DVLGLSQDPVAFHKYFNFEILHARWAMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKL 693 D+ GL +DPVAF KYFNFEILHARWAMLA+LGAL+PELLDL G HF+EPVWWRVGY+KL Sbjct: 140 DIAGLGKDPVAFQKYFNFEILHARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKL 199 Query: 692 KGDTLDYLGIPGLHIAGSQGVIVIAVCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYP 513 KGDTLDYLGIPG H AGSQGVIVIA+CQALLMVGPEYARYCGIEALEPLGIYLPGD+NYP Sbjct: 200 KGDTLDYLGIPGFHFAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYP 259 Query: 512 GGILFDPLGLSKDPVAFEELKVKEIKNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDP 333 GG LFDPL LSKDPVAFEELKVKEIKNGRLAM+AWLGF +QAA TGKGP+ NLL+H++DP Sbjct: 260 GGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADP 319 Query: 332 FHKNVL 315 FH N+L Sbjct: 320 FHNNLL 325 >ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus] Length = 338 Score = 490 bits (1261), Expect = e-136 Identities = 228/281 (81%), Positives = 255/281 (90%) Frame = -2 Query: 1157 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 978 CRASWQELAGVL+FSAIPFTAVKAIANS LG +LQ++L + K SAV NSS F A A++AR Sbjct: 49 CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108 Query: 977 EYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHARW 798 + S WYG+ERPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEILHARW Sbjct: 109 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARW 168 Query: 797 AMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVIVIA 618 AMLASLGALVPE+LD+ G HF EP+WWRVGY+KLKGDTLDYLGIPGLH+AGSQGVIVIA Sbjct: 169 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 228 Query: 617 VCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVAFEELKVKEI 438 +CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGG+LFDPL LSKD AFEELKVKEI Sbjct: 229 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEI 288 Query: 437 KNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVL 315 KNGRLAM+AWLGF QAA+TGKGP+ NLL+HI+DPFH N L Sbjct: 289 KNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNNFL 329 >ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus] Length = 338 Score = 488 bits (1257), Expect = e-135 Identities = 228/281 (81%), Positives = 254/281 (90%) Frame = -2 Query: 1157 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 978 CRASWQELAGVL+FSAIPFTAVKAIANS LG +LQ++L + K SAV NSS F A A++AR Sbjct: 49 CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108 Query: 977 EYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHARW 798 + S WYG+ERPRWLGP+PYDYP YLTGELPGDYGFD+ GLS+DPVAF K+FNFEILHARW Sbjct: 109 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARW 168 Query: 797 AMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVIVIA 618 AMLASLGALVPE+LD+ G HF EP+WWRVGY+KLKGDTLDYLGIPGLH+AGSQGVIVIA Sbjct: 169 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 228 Query: 617 VCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVAFEELKVKEI 438 +CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGG+LFDPL LSKD AFEELKVKEI Sbjct: 229 ICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKEI 288 Query: 437 KNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVL 315 KNGRLAM+AWLGF QAA+TGKGP+ NLL HI+DPFH N L Sbjct: 289 KNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNNFL 329 >ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa] gi|222856453|gb|EEE94000.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa] Length = 338 Score = 488 bits (1255), Expect = e-135 Identities = 228/280 (81%), Positives = 253/280 (90%) Frame = -2 Query: 1157 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 978 C+ASWQELAGV++FSAIPFTAVKAIANS LG +LQ+RL E K AV SS F A AQKAR Sbjct: 52 CKASWQELAGVVIFSAIPFTAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALAQKAR 111 Query: 977 EYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHARW 798 + SFWYG+ERPRWLGPI Y YP YL+GELPGDYGFDV GL++DPVAF +YFNFEILHARW Sbjct: 112 KESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHARW 171 Query: 797 AMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVIVIA 618 AMLA+LGAL+PE+LDLSG HFIEPVWWRVGY+KLKGDTLDYLGIPGLH AG QGV+VIA Sbjct: 172 AMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVIA 231 Query: 617 VCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVAFEELKVKEI 438 CQA+LMVGPEYARYCGIEALEPLGIYLPGD+NYPGGILFDPL LSKDPV+FEELKVKEI Sbjct: 232 FCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEI 291 Query: 437 KNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNV 318 KNGRLAM+AWLGF +QAA+TGKGP+ NL+EHISDP H N+ Sbjct: 292 KNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNL 331 >ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis] gi|223551445|gb|EEF52931.1| chlorophyll A/B binding protein, putative [Ricinus communis] Length = 329 Score = 486 bits (1251), Expect = e-135 Identities = 231/281 (82%), Positives = 251/281 (89%) Frame = -2 Query: 1157 CRASWQELAGVLVFSAIPFTAVKAIANSSLGATLQKRLMETKASAVLNSSNFNASAQKAR 978 C+ASWQELAGVLVFSAIPFTAVKA+ANS LG +LQ+RL E+K AV SS F A KAR Sbjct: 43 CKASWQELAGVLVFSAIPFTAVKALANSPLGESLQRRLEESKKVAVKESSKFQALTAKAR 102 Query: 977 EYSFWYGDERPRWLGPIPYDYPAYLTGELPGDYGFDVLGLSQDPVAFHKYFNFEILHARW 798 + S WYG+ERPRWLGPIPYDYPAYLTGELPGDYGFDV GLS+D VAF +YFNFEILHARW Sbjct: 103 KESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHARW 162 Query: 797 AMLASLGALVPELLDLSGVVHFIEPVWWRVGYAKLKGDTLDYLGIPGLHIAGSQGVIVIA 618 AMLA+LGAL PE+LDLSG HFIEPVWWRVGY+KLKGDTLDYLGIPGLH AGSQGV+VIA Sbjct: 163 AMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVIA 222 Query: 617 VCQALLMVGPEYARYCGIEALEPLGIYLPGDLNYPGGILFDPLGLSKDPVAFEELKVKEI 438 +CQALLMVGPEYARYCGIEALEPLGIYLPGD+NYPGG LFDPL LS D VA EELKVKEI Sbjct: 223 ICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGPLFDPLNLSSDAVALEELKVKEI 282 Query: 437 KNGRLAMIAWLGFSLQAAITGKGPILNLLEHISDPFHKNVL 315 KNGRLAM+AWLGF QAA+TGKGP+ NL+EHISDPFH N+L Sbjct: 283 KNGRLAMVAWLGFYAQAALTGKGPVQNLVEHISDPFHNNLL 323