BLASTX nr result
ID: Coptis25_contig00007501
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00007501 (451 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 132 3e-29 ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi... 130 1e-28 ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc... 109 2e-22 ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc... 109 2e-22 ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm... 100 1e-19 >ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera] gi|297743579|emb|CBI36446.3| unnamed protein product [Vitis vinifera] Length = 374 Score = 132 bits (332), Expect = 3e-29 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 2/151 (1%) Frame = -2 Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFLHRTSILGNPEFEFISLDSTTKS 271 S+L+FKSVSKH LSLI+DP+ NL+ +P +S +F F+ LD S Sbjct: 35 SLLKFKSVSKHWLSLITDPHFSRRKNLKPNP-VSALF------------SFVPLDPLQTS 81 Query: 270 APFKSLTFVNDPVGIKILQSCNGLLCCSS--FRTNSKTYYIYNPTTKQYTILPKACSVPG 97 APF SLTFV+ P GI+ILQSCNGL CCSS + + + YYIYNPTTKQ+T LP C G Sbjct: 82 APFTSLTFVDHPRGIEILQSCNGLFCCSSVDYNDSERKYYIYNPTTKQFTTLPPLC---G 138 Query: 96 SNRGFICSVSLAFNPLKSPDYKVVCMHNIGS 4 + + V+LAF+P KS YKVVC+ S Sbjct: 139 RSVRRVLGVNLAFDPSKSHTYKVVCVQRCKS 169 >ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera] gi|296090309|emb|CBI40128.3| unnamed protein product [Vitis vinifera] Length = 415 Score = 130 bits (326), Expect = 1e-28 Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 3/148 (2%) Frame = -2 Query: 447 ILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFLHRTSILGNPEFEFISLDSTTKSA 268 +LRF+SVSK LSLISDP+ H + R+S + GV L L N F+FIS D S Sbjct: 51 LLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLG----LPNSNFDFISFDEKKASE 106 Query: 267 P-FKSLTFVNDPVGIKILQSCNGLLCCSSFRT--NSKTYYIYNPTTKQYTILPKACSVPG 97 P +SL F+ DP+G+K+LQ CNGLLCCS+ R+ S+ YYI N T+++++LP CS G Sbjct: 107 PPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRSLGTSRNYYICNLATRRFSVLPPPCSSGG 166 Query: 96 SNRGFICSVSLAFNPLKSPDYKVVCMHN 13 R + ++LAF+P KSP Y V+C+ + Sbjct: 167 --RDTVFGINLAFDPSKSPYYSVICVRS 192 >ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus] Length = 393 Score = 109 bits (273), Expect = 2e-22 Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 4/148 (2%) Frame = -2 Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSILGNPEFEFISLDSTT 277 S+LRFKSVSK LSLIS+P H + + +P SG+F R + +P F+FI+ + Sbjct: 34 SLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTPK-SPPFDFINFTTNP 92 Query: 276 KSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYNPTTKQYTILPKACSV 103 PF+S F +D G ILQSCNGL CS++ N T +YI+NPTT +T LP Sbjct: 93 SRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNPTTNHHTKLPYL--- 149 Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCM 19 G + ++LAF+PL+S DYKV+C+ Sbjct: 150 ---QVGAVFGLNLAFDPLRSSDYKVICV 174 >ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus] Length = 393 Score = 109 bits (273), Expect = 2e-22 Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 4/148 (2%) Frame = -2 Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSILGNPEFEFISLDSTT 277 S+LRFKSVSK LSLIS+P H + + +P SG+F R + +P F+FI+ + Sbjct: 34 SLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTPK-SPPFDFINFTTNP 92 Query: 276 KSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYNPTTKQYTILPKACSV 103 PF+S F +D G ILQSCNGL CS++ N T +YI+NPTT +T LP Sbjct: 93 SRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNPTTNHHTKLPYL--- 149 Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCM 19 G + ++LAF+PL+S DYKV+C+ Sbjct: 150 ---QVGAVFGLNLAFDPLRSSDYKVICV 174 >ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis] gi|223534434|gb|EEF36137.1| conserved hypothetical protein [Ricinus communis] Length = 393 Score = 100 bits (249), Expect = 1e-19 Identities = 65/150 (43%), Positives = 90/150 (60%), Gaps = 5/150 (3%) Frame = -2 Query: 447 ILRFKSVSKHCLSLISDPYMVHSYNLRN-SPPISGVFLHRTSILGNPEFEFISLDSTTKS 271 +LRFKSVSK LSLIS P+ + LRN + IS +FL + + EF+F+SL S++ S Sbjct: 29 LLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPL----EFKFLSLSSSSSS 84 Query: 270 APFKSLTFVNDPV-GIKILQSCNGLLCCSSFRT--NSKTYYIYNPTTKQYTILPKAC-SV 103 + + D GIKILQSCNGLL CS+ + YYI NPTTKQ LP Sbjct: 85 SSSSASPLSFDLFHGIKILQSCNGLLLCSTLPKIGQKRNYYISNPTTKQMFTLPSLVGDA 144 Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCMHN 13 ++ + ++LAF+PLKS +YKV+C+ + Sbjct: 145 NAASPTTLFGLNLAFDPLKSCNYKVICVRS 174