BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007501
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   132   3e-29
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   130   1e-28
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   109   2e-22
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   109   2e-22
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   100   1e-19

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  132 bits (332), Expect = 3e-29
 Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 2/151 (1%)
 Frame = -2

Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFLHRTSILGNPEFEFISLDSTTKS 271
           S+L+FKSVSKH LSLI+DP+     NL+ +P +S +F             F+ LD    S
Sbjct: 35  SLLKFKSVSKHWLSLITDPHFSRRKNLKPNP-VSALF------------SFVPLDPLQTS 81

Query: 270 APFKSLTFVNDPVGIKILQSCNGLLCCSS--FRTNSKTYYIYNPTTKQYTILPKACSVPG 97
           APF SLTFV+ P GI+ILQSCNGL CCSS  +  + + YYIYNPTTKQ+T LP  C   G
Sbjct: 82  APFTSLTFVDHPRGIEILQSCNGLFCCSSVDYNDSERKYYIYNPTTKQFTTLPPLC---G 138

Query: 96  SNRGFICSVSLAFNPLKSPDYKVVCMHNIGS 4
            +   +  V+LAF+P KS  YKVVC+    S
Sbjct: 139 RSVRRVLGVNLAFDPSKSHTYKVVCVQRCKS 169


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
 Frame = -2

Query: 447 ILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFLHRTSILGNPEFEFISLDSTTKSA 268
           +LRF+SVSK  LSLISDP+  H +  R+S  + GV L     L N  F+FIS D    S 
Sbjct: 51  LLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLLG----LPNSNFDFISFDEKKASE 106

Query: 267 P-FKSLTFVNDPVGIKILQSCNGLLCCSSFRT--NSKTYYIYNPTTKQYTILPKACSVPG 97
           P  +SL F+ DP+G+K+LQ CNGLLCCS+ R+   S+ YYI N  T+++++LP  CS  G
Sbjct: 107 PPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRSLGTSRNYYICNLATRRFSVLPPPCSSGG 166

Query: 96  SNRGFICSVSLAFNPLKSPDYKVVCMHN 13
             R  +  ++LAF+P KSP Y V+C+ +
Sbjct: 167 --RDTVFGINLAFDPSKSPYYSVICVRS 192


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  109 bits (273), Expect = 2e-22
 Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
 Frame = -2

Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSILGNPEFEFISLDSTT 277
           S+LRFKSVSK  LSLIS+P   H   + +  +P  SG+F  R +   +P F+FI+  +  
Sbjct: 34  SLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTPK-SPPFDFINFTTNP 92

Query: 276 KSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYNPTTKQYTILPKACSV 103
              PF+S  F +D  G  ILQSCNGL  CS++  N  T  +YI+NPTT  +T LP     
Sbjct: 93  SRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNPTTNHHTKLPYL--- 149

Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCM 19
                G +  ++LAF+PL+S DYKV+C+
Sbjct: 150 ---QVGAVFGLNLAFDPLRSSDYKVICV 174


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  109 bits (273), Expect = 2e-22
 Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
 Frame = -2

Query: 450 SILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSILGNPEFEFISLDSTT 277
           S+LRFKSVSK  LSLIS+P   H   + +  +P  SG+F  R +   +P F+FI+  +  
Sbjct: 34  SLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTPK-SPPFDFINFTTNP 92

Query: 276 KSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYNPTTKQYTILPKACSV 103
              PF+S  F +D  G  ILQSCNGL  CS++  N  T  +YI+NPTT  +T LP     
Sbjct: 93  SRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHNPTTNHHTKLPYL--- 149

Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCM 19
                G +  ++LAF+PL+S DYKV+C+
Sbjct: 150 ---QVGAVFGLNLAFDPLRSSDYKVICV 174


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  100 bits (249), Expect = 1e-19
 Identities = 65/150 (43%), Positives = 90/150 (60%), Gaps = 5/150 (3%)
 Frame = -2

Query: 447 ILRFKSVSKHCLSLISDPYMVHSYNLRN-SPPISGVFLHRTSILGNPEFEFISLDSTTKS 271
           +LRFKSVSK  LSLIS P+    + LRN +  IS +FL  + +    EF+F+SL S++ S
Sbjct: 29  LLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISALFLRNSPL----EFKFLSLSSSSSS 84

Query: 270 APFKSLTFVNDPV-GIKILQSCNGLLCCSSFRT--NSKTYYIYNPTTKQYTILPKAC-SV 103
           +   +     D   GIKILQSCNGLL CS+       + YYI NPTTKQ   LP      
Sbjct: 85  SSSSASPLSFDLFHGIKILQSCNGLLLCSTLPKIGQKRNYYISNPTTKQMFTLPSLVGDA 144

Query: 102 PGSNRGFICSVSLAFNPLKSPDYKVVCMHN 13
             ++   +  ++LAF+PLKS +YKV+C+ +
Sbjct: 145 NAASPTTLFGLNLAFDPLKSCNYKVICVRS 174