BLASTX nr result

ID: Coptis25_contig00007484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007484
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255...   184   2e-44
ref|XP_002514753.1| conserved hypothetical protein [Ricinus comm...   179   3e-43
ref|XP_002328442.1| predicted protein [Populus trichocarpa] gi|2...   172   6e-41
ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228...   170   2e-40
ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana] ...   167   1e-39

>ref|XP_002284935.1| PREDICTED: uncharacterized protein LOC100255290 [Vitis vinifera]
          Length = 235

 Score =  184 bits (466), Expect = 2e-44
 Identities = 80/111 (72%), Positives = 97/111 (87%)
 Frame = -3

Query: 372 SLGPKKFGSSVEMFNYFFKFVHYWPMNFDINKYEYMILLDLLRKGHPEPDKKIGAGISGF 193
           SLGPK FGSSVEMF++FFKF+HYWP N D+NKYE+M+LLDLL+KGH EPDKKIG GI  F
Sbjct: 96  SLGPKTFGSSVEMFDHFFKFLHYWPANLDVNKYEHMMLLDLLKKGHTEPDKKIGGGIHAF 155

Query: 192 QIRVHPMWKSRCFFIIREDETVDDFSYRKCIDCILPLPEEMRVNSDANKAL 40
           Q+R HP++KSRCFF+IR+DE+VDDFS+RKC+D I PLPE M+  S+ NKAL
Sbjct: 156 QVRYHPVFKSRCFFVIRDDESVDDFSFRKCVDHISPLPENMKAKSEVNKAL 206


>ref|XP_002514753.1| conserved hypothetical protein [Ricinus communis]
           gi|223546357|gb|EEF47859.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  179 bits (455), Expect = 3e-43
 Identities = 74/108 (68%), Positives = 94/108 (87%)
 Frame = -3

Query: 372 SLGPKKFGSSVEMFNYFFKFVHYWPMNFDINKYEYMILLDLLRKGHPEPDKKIGAGISGF 193
           SLGPK FGSSVEMF+YF+  +HYWP N  +NKYE+M+LL+LL+KGH +P+KKIG GI  F
Sbjct: 84  SLGPKSFGSSVEMFDYFYNLLHYWPPNLTVNKYEHMVLLELLKKGHSDPEKKIGGGIQAF 143

Query: 192 QIRVHPMWKSRCFFIIREDETVDDFSYRKCIDCILPLPEEMRVNSDAN 49
           Q+R HPMWKSRCFF+IR+D+T+DDFS+RKC+D ILPLPE+M++ SD N
Sbjct: 144 QVRYHPMWKSRCFFLIRDDDTMDDFSFRKCVDKILPLPEDMKIKSDGN 191


>ref|XP_002328442.1| predicted protein [Populus trichocarpa] gi|222838157|gb|EEE76522.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score =  172 bits (435), Expect = 6e-41
 Identities = 73/105 (69%), Positives = 92/105 (87%)
 Frame = -3

Query: 369 LGPKKFGSSVEMFNYFFKFVHYWPMNFDINKYEYMILLDLLRKGHPEPDKKIGAGISGFQ 190
           LG K FGS+VEMF+YF+ F+HYWP N ++NKYE M+LLDLL++GH EPDKKIG GI  FQ
Sbjct: 109 LGLKSFGSAVEMFDYFYNFLHYWPPNLNVNKYEQMVLLDLLKRGHTEPDKKIGGGIQTFQ 168

Query: 189 IRVHPMWKSRCFFIIREDETVDDFSYRKCIDCILPLPEEMRVNSD 55
           +R HPM+KSRCFF+IR+DE+VDDFS+RKC+D ILPLPE+M++ SD
Sbjct: 169 VRFHPMFKSRCFFLIRDDESVDDFSFRKCVDHILPLPEDMKIKSD 213


>ref|XP_004154974.1| PREDICTED: uncharacterized protein LOC101228008 [Cucumis sativus]
          Length = 232

 Score =  170 bits (430), Expect = 2e-40
 Identities = 73/111 (65%), Positives = 93/111 (83%)
 Frame = -3

Query: 372 SLGPKKFGSSVEMFNYFFKFVHYWPMNFDINKYEYMILLDLLRKGHPEPDKKIGAGISGF 193
           SLGPK F SSVE+F+YF+K +H+WP+N ++N+YE M+L+DLL+KGH EP+KKIG GI  F
Sbjct: 96  SLGPKSFRSSVELFDYFYKILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSF 155

Query: 192 QIRVHPMWKSRCFFIIREDETVDDFSYRKCIDCILPLPEEMRVNSDANKAL 40
           QIR HP WKS+CFF+IREDE+ DDFS+RKC+D ILPLPE  +   DAN+AL
Sbjct: 156 QIRFHPEWKSKCFFLIREDESADDFSFRKCVDHILPLPENFKGKFDANRAL 206


>ref|NP_201050.2| uncharacterized protein [Arabidopsis thaliana]
           gi|20385491|gb|AAM21312.1|AF371327_1 EMB514 [Arabidopsis
           thaliana] gi|21593438|gb|AAM65405.1| unknown
           [Arabidopsis thaliana] gi|30793885|gb|AAP40395.1|
           unknown protein [Arabidopsis thaliana]
           gi|30794104|gb|AAP40494.1| unknown protein [Arabidopsis
           thaliana] gi|51968752|dbj|BAD43068.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|110739286|dbj|BAF01556.1| hypothetical protein
           [Arabidopsis thaliana] gi|332010225|gb|AED97608.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 202

 Score =  167 bits (424), Expect = 1e-39
 Identities = 69/101 (68%), Positives = 88/101 (87%)
 Frame = -3

Query: 369 LGPKKFGSSVEMFNYFFKFVHYWPMNFDINKYEYMILLDLLRKGHPEPDKKIGAGISGFQ 190
           LGPK+F +SV MF+YF KF+H+WP + D+NKYE+M+LLDL++KGH EP+KKIG GI  FQ
Sbjct: 69  LGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKTFQ 128

Query: 189 IRVHPMWKSRCFFIIREDETVDDFSYRKCIDCILPLPEEMR 67
           +R HPMWKSRCFF++RED+T DDFS+RKC+D ILPLPE M+
Sbjct: 129 VRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENMK 169


Top