BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007437
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro...   194   3e-47
gb|ABK94900.1| unknown [Populus trichocarpa]                          189   7e-46
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus...   187   3e-45
ref|XP_002327335.1| predicted protein [Populus trichocarpa] gi|2...   184   2e-44
ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43

>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
           vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  194 bits (492), Expect = 3e-47
 Identities = 110/172 (63%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
 Frame = +2

Query: 83  FFSPISLTCSPLLQKSSYVSKFSETE--ALPVIESQPDSELTQVAEFTDVETTKPEQIFA 256
           F SP SLT S   +  S + K SE E   + V  S+P+SE  QV E    E  K E+IFA
Sbjct: 39  FLSPHSLTLSSR-RPPSPLPKSSEFEPSVIEVESSEPNSEALQVVEEPPPELPKREEIFA 97

Query: 257 VVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKVLLVGTKTTTYIGQPVVTNAAVHAV 436
           VVMIG RQYIVFPGR++ TQRLKGA+VNDKIILN+VLLVGTKT+TYIG+PVV NAAVHAV
Sbjct: 98  VVMIGSRQYIVFPGRYIYTQRLKGADVNDKIILNRVLLVGTKTSTYIGKPVVPNAAVHAV 157

Query: 437 VEDQGLNPXXXXXXXXXXXXXXXXXGHRQPNTRIRITGITGYQDFPAVTLDS 592
           VE+QGLNP                 GHRQPNTRIRITGITGYQD PAVTLDS
Sbjct: 158 VEEQGLNPKVMVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDSPAVTLDS 209


>gb|ABK94900.1| unknown [Populus trichocarpa]
          Length = 225

 Score =  189 bits (480), Expect = 7e-46
 Identities = 105/195 (53%), Positives = 132/195 (67%), Gaps = 12/195 (6%)
 Frame = +2

Query: 44  NQSLLISKTNKPTFFSPISLTCSPLL--QKSSYVS--KFSETEA--------LPVIESQP 187
           +++L +SK N  +F +      SPL+  ++ ++ +  K SE+EA        +PV E+ P
Sbjct: 31  SKTLCLSKPNFGSFSNTTKKLSSPLIFSKRPTFFARPKVSESEAPVVEAETEVPVSEANP 90

Query: 188 DSELTQVAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKVL 367
           +   TQ+ E    E TK E+IFAVVM+G RQYIV PGR+L  QRLKGANVNDKI+LNKVL
Sbjct: 91  EPAATQIVEVAKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVL 150

Query: 368 LVGTKTTTYIGQPVVTNAAVHAVVEDQGLNPXXXXXXXXXXXXXXXXXGHRQPNTRIRIT 547
           LVGT+T+ YIG+PVVTNA+VHAVVE+QGL+                  GHRQPNTRIRIT
Sbjct: 151 LVGTRTSAYIGKPVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRIT 210

Query: 548 GITGYQDFPAVTLDS 592
           GITGYQDFP  TLDS
Sbjct: 211 GITGYQDFPVSTLDS 225


>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
           gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 214

 Score =  187 bits (475), Expect = 3e-45
 Identities = 111/204 (54%), Positives = 134/204 (65%), Gaps = 17/204 (8%)
 Frame = +2

Query: 32  SNFKNQSLLISKTNKPTFFSPISLTCSP----------LLQKSSY--VSKFSETEALPVI 175
           S+F  Q  + +    P F S    + +P          L  + S+  + K SE++A PV+
Sbjct: 12  SSFTAQCTISNHKQNPNFISKTHFSSNPKIGPFTKSHKLTTRPSFLPILKSSESDA-PVL 70

Query: 176 ESQPDS--ELT-QVAEFTDV--ETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVN 340
           E +  +  EL  + A F +V  E TK E+IFAVVM+GGRQYIV PGRF+  QRLKGANVN
Sbjct: 71  EVEDANAPELQPEPAPFVEVAKEETKREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVN 130

Query: 341 DKIILNKVLLVGTKTTTYIGQPVVTNAAVHAVVEDQGLNPXXXXXXXXXXXXXXXXXGHR 520
           DK+ LNKVLLVGT+TTTYIG+PVVTNA VHAVVE+QGLNP                 GHR
Sbjct: 131 DKVALNKVLLVGTRTTTYIGKPVVTNAVVHAVVEEQGLNPKVVVFKYKKKKNYRRNIGHR 190

Query: 521 QPNTRIRITGITGYQDFPAVTLDS 592
           QPNTRIRITGITGYQD+PAVTLDS
Sbjct: 191 QPNTRIRITGITGYQDYPAVTLDS 214


>ref|XP_002327335.1| predicted protein [Populus trichocarpa] gi|222835705|gb|EEE74140.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  184 bits (468), Expect = 2e-44
 Identities = 106/194 (54%), Positives = 125/194 (64%), Gaps = 8/194 (4%)
 Frame = +2

Query: 35  NFKNQSLLISKTNKPTFFSPISLTCSPLLQKSSYVSKFSETEAL--------PVIESQPD 190
           N  + SL+ SK  +PTFF+      +P         KFSE+EAL        PV E+ P+
Sbjct: 50  NLSSSSLIFSK--RPTFFA------NP--------PKFSESEALVVEAEPEVPVSEANPE 93

Query: 191 SELTQVAEFTDVETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKVLL 370
              TQ+ E    E  K E+IFAVVM+G RQYIV PGR+L  QRLKGANVNDK+ LNKVLL
Sbjct: 94  PAATQMVEVAKEEPPKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKVNLNKVLL 153

Query: 371 VGTKTTTYIGQPVVTNAAVHAVVEDQGLNPXXXXXXXXXXXXXXXXXGHRQPNTRIRITG 550
           VGT+T+ YIG+PVVTNA VHAVVE+QGL+                  GHRQPNTRIRITG
Sbjct: 154 VGTRTSAYIGKPVVTNATVHAVVEEQGLDAKKIVFKYKKKKNYRRNIGHRQPNTRIRITG 213

Query: 551 ITGYQDFPAVTLDS 592
           ITGYQD+P  TLDS
Sbjct: 214 ITGYQDYPVSTLDS 227


>ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|222862430|gb|EEE99936.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  181 bits (460), Expect = 1e-43
 Identities = 101/183 (55%), Positives = 122/183 (66%)
 Frame = +2

Query: 44  NQSLLISKTNKPTFFSPISLTCSPLLQKSSYVSKFSETEALPVIESQPDSELTQVAEFTD 223
           +++L +SK N  +F +      SPL+      SK     A P  ++ P+   TQ+ E   
Sbjct: 31  SKTLCLSKPNFGSFSNTTKKLSSPLI-----FSKRPTFFARP--KANPEPAATQIVEVAK 83

Query: 224 VETTKPEQIFAVVMIGGRQYIVFPGRFLTTQRLKGANVNDKIILNKVLLVGTKTTTYIGQ 403
            E TK E+IFAVVM+G RQYIV PGR+L  QRLKGANVNDKI+LNKVLLVGT+T+ YIG+
Sbjct: 84  EEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLLVGTRTSAYIGK 143

Query: 404 PVVTNAAVHAVVEDQGLNPXXXXXXXXXXXXXXXXXGHRQPNTRIRITGITGYQDFPAVT 583
           PVVTNA+VHAVVE+QGL+                  GHRQPNTRIRITGITGYQDFP  T
Sbjct: 144 PVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITGITGYQDFPVST 203

Query: 584 LDS 592
           LDS
Sbjct: 204 LDS 206