BLASTX nr result

ID: Coptis25_contig00007426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007426
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis...   264   2e-68
ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|2...   262   6e-68
ref|XP_003631220.1| PREDICTED: glutaminyl-tRNA synthetase isofor...   256   6e-66
ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isofor...   256   6e-66
ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinu...   254   2e-65

>ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis vinifera]
           gi|297734636|emb|CBI16687.3| unnamed protein product
           [Vitis vinifera]
          Length = 790

 Score =  264 bits (675), Expect = 2e-68
 Identities = 144/245 (58%), Positives = 168/245 (68%), Gaps = 2/245 (0%)
 Frame = -1

Query: 730 LELFLKIGLEEXXXXXXXXXXXXXXNLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 551
           L+LFLKIGL+E              NL +VIHEA VT+GCS+TIGNLLYTVATKFPANAL
Sbjct: 9   LDLFLKIGLDERTARNTIANNKVTSNLTAVIHEAAVTDGCSRTIGNLLYTVATKFPANAL 68

Query: 550 VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 371
           VHR TLL+YIVS  IK+ AQLEAA  F    G E F +  FEEACGVGV+V+ E++E+TV
Sbjct: 69  VHRPTLLQYIVSSKIKTPAQLEAAFSFFTSTGSENFQLNDFEEACGVGVDVSAEDVERTV 128

Query: 370 GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERT-AXXX 197
            ++ EE KSTILE RYRT  G+LF  VRK  PWAD K VK+ I  KLYEL+G RT A   
Sbjct: 129 NEIFEENKSTILEHRYRTNVGDLFGHVRKRQPWADPKIVKQLIDAKLYELLGARTAADDE 188

Query: 196 XXXXXXXXXXXXXXXXXXVVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLR 17
                              ++   A P+EEELNPFLIFP+PEEN KVHTE+FFSDRPVLR
Sbjct: 189 KPSKKKKEKPVKVEDKTVALETSPAQPAEEELNPFLIFPQPEENFKVHTEIFFSDRPVLR 248

Query: 16  VCNTK 2
            CN+K
Sbjct: 249 PCNSK 253


>ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|222852227|gb|EEE89774.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  262 bits (670), Expect = 6e-68
 Identities = 147/244 (60%), Positives = 165/244 (67%), Gaps = 1/244 (0%)
 Frame = -1

Query: 730 LELFLKIGLEEXXXXXXXXXXXXXXNLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 551
           LELFLKIGL+E              NL +VIHEAGVTEGC++TIGNLLY VATK PANAL
Sbjct: 13  LELFLKIGLDERTARNTIANNKVTNNLTAVIHEAGVTEGCNRTIGNLLYMVATKHPANAL 72

Query: 550 VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 371
           +HR TLL YIVS  IK+ AQLEAA  FL     E F++K FEEACGVGVEV+ E+IEQTV
Sbjct: 73  IHRPTLLGYIVSAKIKTPAQLEAAFSFLSSTASESFELKEFEEACGVGVEVSEEDIEQTV 132

Query: 370 GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 194
            +V ++ K +ILE RYR   G+LF  VRK LPWAD K VK+ I  KLYEL+GERTA    
Sbjct: 133 NEVFKQNKGSILELRYRINVGDLFGHVRKRLPWADPKIVKKLIDAKLYELLGERTAADNE 192

Query: 193 XXXXXXXXXXXXXXXXXVVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLRV 14
                            V D     PS E+LNPFLIFP PEEN KVHTEVFFSDRPVLR 
Sbjct: 193 KPSKQKKEKPAKVEDKKVADENPVQPS-EDLNPFLIFPNPEENFKVHTEVFFSDRPVLRC 251

Query: 13  CNTK 2
           CNTK
Sbjct: 252 CNTK 255


>ref|XP_003631220.1| PREDICTED: glutaminyl-tRNA synthetase isoform 2 [Vitis vinifera]
          Length = 802

 Score =  256 bits (653), Expect = 6e-66
 Identities = 139/244 (56%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
 Frame = -1

Query: 730 LELFLKIGLEEXXXXXXXXXXXXXXNLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 551
           L+LFLKIGL+E              NL +VIHEA +T GC++T+GNLLYTVATKFPANAL
Sbjct: 12  LDLFLKIGLDERTARNTIANNKVTANLTAVIHEAALTNGCNRTVGNLLYTVATKFPANAL 71

Query: 550 VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 371
           VHR TLL+YIVS  IK+ AQLEAA  F   IG E F++K FEE+CGVG++V  E+IE+TV
Sbjct: 72  VHRPTLLQYIVSSKIKTPAQLEAAFSFYSSIGSENFELKEFEESCGVGIDVPIEDIERTV 131

Query: 370 GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 194
            ++ EE K+ IL  RY+T  G+LF  VRK  PWAD K VK+ I  KLY L+GE+TA    
Sbjct: 132 NEIFEENKNVILGQRYQTNVGDLFGHVRKSHPWADPKIVKQLIDVKLYGLLGEKTA-ADD 190

Query: 193 XXXXXXXXXXXXXXXXXVVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLRV 14
                             VD      SEEELNPFLIFP+PEEN KVHTE+FFSDRPVLRV
Sbjct: 191 EKPSRKKKEKQAKSESIAVDTHPPPTSEEELNPFLIFPQPEENFKVHTEIFFSDRPVLRV 250

Query: 13  CNTK 2
           CNT+
Sbjct: 251 CNTR 254


>ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isoform 1 [Vitis vinifera]
           gi|297737799|emb|CBI27000.3| unnamed protein product
           [Vitis vinifera]
          Length = 791

 Score =  256 bits (653), Expect = 6e-66
 Identities = 139/244 (56%), Positives = 166/244 (68%), Gaps = 1/244 (0%)
 Frame = -1

Query: 730 LELFLKIGLEEXXXXXXXXXXXXXXNLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 551
           L+LFLKIGL+E              NL +VIHEA +T GC++T+GNLLYTVATKFPANAL
Sbjct: 12  LDLFLKIGLDERTARNTIANNKVTANLTAVIHEAALTNGCNRTVGNLLYTVATKFPANAL 71

Query: 550 VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 371
           VHR TLL+YIVS  IK+ AQLEAA  F   IG E F++K FEE+CGVG++V  E+IE+TV
Sbjct: 72  VHRPTLLQYIVSSKIKTPAQLEAAFSFYSSIGSENFELKEFEESCGVGIDVPIEDIERTV 131

Query: 370 GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 194
            ++ EE K+ IL  RY+T  G+LF  VRK  PWAD K VK+ I  KLY L+GE+TA    
Sbjct: 132 NEIFEENKNVILGQRYQTNVGDLFGHVRKSHPWADPKIVKQLIDVKLYGLLGEKTA-ADD 190

Query: 193 XXXXXXXXXXXXXXXXXVVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLRV 14
                             VD      SEEELNPFLIFP+PEEN KVHTE+FFSDRPVLRV
Sbjct: 191 EKPSRKKKEKQAKSESIAVDTHPPPTSEEELNPFLIFPQPEENFKVHTEIFFSDRPVLRV 250

Query: 13  CNTK 2
           CNT+
Sbjct: 251 CNTR 254


>ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinus communis]
           gi|223533627|gb|EEF35364.1| glutaminyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 793

 Score =  254 bits (649), Expect = 2e-65
 Identities = 139/248 (56%), Positives = 164/248 (66%), Gaps = 1/248 (0%)
 Frame = -1

Query: 742 ASDSLELFLKIGLEEXXXXXXXXXXXXXXNLLSVIHEAGVTEGCSKTIGNLLYTVATKFP 563
           A+  LELFLKIGL+E              NL +VIHEAGV EGCS+T+GNLLYTVATK+P
Sbjct: 10  ATPPLELFLKIGLDERTAKNTIANNKVTNNLTTVIHEAGVNEGCSRTVGNLLYTVATKYP 69

Query: 562 ANALVHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEI 383
            NALVHR  LLEYIVS  IK++AQLEAA  FL     E F +  FEEACGVGVEV+ ++I
Sbjct: 70  TNALVHRPALLEYIVSSKIKTSAQLEAAFSFLSNTASESFKLNDFEEACGVGVEVSADDI 129

Query: 382 EQTVGKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTA 206
           E+   +V E+ K +ILE RYRT  G+LF  VR  LPWAD K VK+ I  KL+EL+GERTA
Sbjct: 130 EKAANEVFEQNKVSILELRYRTNVGDLFGHVRNRLPWADPKIVKQLIDAKLFELLGERTA 189

Query: 205 XXXXXXXXXXXXXXXXXXXXXVVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRP 26
                                V D P   PSEE+LNPFLIFP P+EN KVHTE+ FSD+ 
Sbjct: 190 ADNEKPSKQKKEKPAKVQEKKVADCPVQ-PSEEDLNPFLIFPNPDENFKVHTEILFSDKS 248

Query: 25  VLRVCNTK 2
           +LR CNTK
Sbjct: 249 ILRCCNTK 256


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