BLASTX nr result

ID: Coptis25_contig00007423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007423
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8...   207   7e-52
ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8...   206   1e-51
emb|CBI35972.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_003627931.1| Multidrug resistance protein ABC transporter...   206   2e-51
ref|XP_003638627.1| Ubiquitin carboxyl-terminal hydrolase [Medic...   205   4e-51

>ref|XP_003529736.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1951

 Score =  207 bits (527), Expect = 7e-52
 Identities = 103/121 (85%), Positives = 113/121 (93%)
 Frame = -1

Query: 504  EGDNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIVQKVIRKEFSNCTVITVA 325
            EG NWS+GQRQLFCLGRVLLKRN+ILVLDEATASIDSATDAI+Q++IR+EF+ CTVITVA
Sbjct: 1831 EGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQQIIRQEFAKCTVITVA 1890

Query: 324  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRRSSQQILRCSTE 145
            HRVPTVIDSDMVMVLSYGKLVEYDEPSKLM+TNSSFSKLVAEYWSSCR++S Q L  S  
Sbjct: 1891 HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSPQTLAGSNI 1950

Query: 144  E 142
            E
Sbjct: 1951 E 1951


>ref|XP_002276236.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1465

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/113 (89%), Positives = 109/113 (96%)
 Frame = -1

Query: 504  EGDNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIVQKVIRKEFSNCTVITVA 325
            EG+NWS GQRQLFCLGRVLLKRN+ILVLDEATASIDSATDAI+Q++IR+EFSNCTVITVA
Sbjct: 1344 EGENWSAGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVA 1403

Query: 324  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRRSSQQ 166
            HRVPT+IDSDMVMVLSYGKLVEYDEPS LMETNSSFSKLVAEYWSSC R+S Q
Sbjct: 1404 HRVPTLIDSDMVMVLSYGKLVEYDEPSNLMETNSSFSKLVAEYWSSCWRNSSQ 1456


>emb|CBI35972.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/113 (89%), Positives = 109/113 (96%)
 Frame = -1

Query: 504  EGDNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIVQKVIRKEFSNCTVITVA 325
            EG+NWS GQRQLFCLGRVLLKRN+ILVLDEATASIDSATDAI+Q++IR+EFSNCTVITVA
Sbjct: 973  EGENWSAGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIRQEFSNCTVITVA 1032

Query: 324  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRRSSQQ 166
            HRVPT+IDSDMVMVLSYGKLVEYDEPS LMETNSSFSKLVAEYWSSC R+S Q
Sbjct: 1033 HRVPTLIDSDMVMVLSYGKLVEYDEPSNLMETNSSFSKLVAEYWSSCWRNSSQ 1085


>ref|XP_003627931.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355521953|gb|AET02407.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1306

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/111 (90%), Positives = 108/111 (97%)
 Frame = -1

Query: 504  EGDNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIVQKVIRKEFSNCTVITVA 325
            EG NWS+GQRQLFCLGRVLLKRNKILVLDEATASIDSATDAI+Q++IR+EF  CTVITVA
Sbjct: 1162 EGGNWSLGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAILQRIIRQEFEECTVITVA 1221

Query: 324  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRRSS 172
            HRVPTVIDSDMVMVLSYGKLVEYDEPSKLM+TNSSFSKLVAEYWSSCR+SS
Sbjct: 1222 HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKSS 1272


>ref|XP_003638627.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355504562|gb|AES85765.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 960

 Score =  205 bits (521), Expect = 4e-51
 Identities = 102/115 (88%), Positives = 110/115 (95%)
 Frame = -1

Query: 504  EGDNWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIVQKVIRKEFSNCTVITVA 325
            EG NWS+ QRQLFCLGRVLLKRNKILVLDEATASIDS+TDAI+Q+VIR+EF+ CTVITVA
Sbjct: 844  EGGNWSLRQRQLFCLGRVLLKRNKILVLDEATASIDSSTDAILQRVIRQEFAECTVITVA 903

Query: 324  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMETNSSFSKLVAEYWSSCRRSSQQIL 160
            HRVPTVIDSDMVMVLSYGKLVEYDEPSKLM+TNSSFSKLVAEYWSSCR+SS Q L
Sbjct: 904  HRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKSSSQRL 958


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