BLASTX nr result

ID: Coptis25_contig00007419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007419
         (1843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555171.1| PREDICTED: anaphase-promoting complex subuni...   185   4e-44
ref|XP_003604280.1| Anaphase promoting complex subunit [Medicago...   184   5e-44
ref|NP_187238.2| anaphase-promoting complex subunit 11 [Arabidop...   184   5e-44
ref|XP_002327938.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-44
sp|Q9M9L0.2|APC11_ARATH RecName: Full=Anaphase-promoting complex...   184   5e-44

>ref|XP_003555171.1| PREDICTED: anaphase-promoting complex subunit 11-like [Glycine max]
          Length = 129

 Score =  185 bits (469), Expect = 4e-44
 Identities = 74/78 (94%), Positives = 76/78 (97%)
 Frame = -1

Query: 1468 GXWHAVASWTWDAQDETCGICRMAFDGCCPDCQLPGDDCPLIWGACNHAFHLHCILKWVN 1289
            G WHAVASWTWDAQDETCGICRMAFDGCCPDC+LPGDDCPLIWG CNHAFHLHCILKWVN
Sbjct: 51   GLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGVCNHAFHLHCILKWVN 110

Query: 1288 SQTSQAHCPMCRREWQYK 1235
            SQTSQAHCPMCRREWQ+K
Sbjct: 111  SQTSQAHCPMCRREWQFK 128


>ref|XP_003604280.1| Anaphase promoting complex subunit [Medicago truncatula]
            gi|355505335|gb|AES86477.1| Anaphase promoting complex
            subunit [Medicago truncatula]
          Length = 83

 Score =  184 bits (468), Expect = 5e-44
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -1

Query: 1462 WHAVASWTWDAQDETCGICRMAFDGCCPDCQLPGDDCPLIWGACNHAFHLHCILKWVNSQ 1283
            WHAVASWTWDAQDETCGICRMAFDGCCPDC+LPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 7    WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 66

Query: 1282 TSQAHCPMCRREWQYK 1235
            TSQAHCPMCRREWQ+K
Sbjct: 67   TSQAHCPMCRREWQFK 82


>ref|NP_187238.2| anaphase-promoting complex subunit 11 [Arabidopsis thaliana]
            gi|334185113|ref|NP_001189819.1| anaphase-promoting
            complex subunit 11 [Arabidopsis thaliana]
            gi|297791461|ref|XP_002863615.1| anaphase promoting
            complex subunit 11 [Arabidopsis lyrata subsp. lyrata]
            gi|297309450|gb|EFH39874.1| anaphase promoting complex
            subunit 11 [Arabidopsis lyrata subsp. lyrata]
            gi|332640788|gb|AEE74309.1| anaphase-promoting complex
            subunit 11 [Arabidopsis thaliana]
            gi|332640789|gb|AEE74310.1| anaphase-promoting complex
            subunit 11 [Arabidopsis thaliana]
          Length = 87

 Score =  184 bits (468), Expect = 5e-44
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -1

Query: 1462 WHAVASWTWDAQDETCGICRMAFDGCCPDCQLPGDDCPLIWGACNHAFHLHCILKWVNSQ 1283
            WHAVASWTWDAQDETCGICRMAFDGCCPDC+LPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 11   WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 70

Query: 1282 TSQAHCPMCRREWQYK 1235
            TSQAHCPMCRREWQ+K
Sbjct: 71   TSQAHCPMCRREWQFK 86


>ref|XP_002327938.1| predicted protein [Populus trichocarpa] gi|222837347|gb|EEE75726.1|
            predicted protein [Populus trichocarpa]
          Length = 77

 Score =  184 bits (468), Expect = 5e-44
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -1

Query: 1462 WHAVASWTWDAQDETCGICRMAFDGCCPDCQLPGDDCPLIWGACNHAFHLHCILKWVNSQ 1283
            WHAVASWTWDAQDETCGICRMAFDGCCPDC+LPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 1    WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 60

Query: 1282 TSQAHCPMCRREWQYK 1235
            TSQAHCPMCRREWQ+K
Sbjct: 61   TSQAHCPMCRREWQFK 76


>sp|Q9M9L0.2|APC11_ARATH RecName: Full=Anaphase-promoting complex subunit 11; AltName:
            Full=Cyclosome subunit 11 gi|16197625|gb|AAL13436.1|
            anaphase promoting complex subunit 11 [Arabidopsis
            thaliana]
          Length = 84

 Score =  184 bits (468), Expect = 5e-44
 Identities = 74/76 (97%), Positives = 76/76 (100%)
 Frame = -1

Query: 1462 WHAVASWTWDAQDETCGICRMAFDGCCPDCQLPGDDCPLIWGACNHAFHLHCILKWVNSQ 1283
            WHAVASWTWDAQDETCGICRMAFDGCCPDC+LPGDDCPLIWGACNHAFHLHCILKWVNSQ
Sbjct: 8    WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCILKWVNSQ 67

Query: 1282 TSQAHCPMCRREWQYK 1235
            TSQAHCPMCRREWQ+K
Sbjct: 68   TSQAHCPMCRREWQFK 83


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