BLASTX nr result

ID: Coptis25_contig00007400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007400
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893823.1| EMB3003 [Arabidopsis lyrata subsp. lyrata] g...   265   8e-69
gb|AAF79262.1|AC023279_11 F12K21.24 [Arabidopsis thaliana]            263   2e-68
ref|NP_174703.1| pyruvate dehydrogenase E2 component [Arabidopsi...   263   2e-68
gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [A...   262   6e-68
ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acety...   258   7e-67

>ref|XP_002893823.1| EMB3003 [Arabidopsis lyrata subsp. lyrata]
           gi|297339665|gb|EFH70082.1| EMB3003 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 461

 Score =  265 bits (677), Expect = 8e-69
 Identities = 150/248 (60%), Positives = 170/248 (68%)
 Frame = +3

Query: 3   KADMDVETFYDGYLAAIMVDEGGIAAVGSAIAYLAETEDEIDAARSKAALAGGGAFSKEE 182
           KADMDVETFYDGYLAAIMV+EGG+A VGSAIA LAETEDEI  A++KA+ +GGG  S  +
Sbjct: 80  KADMDVETFYDGYLAAIMVEEGGVAPVGSAIALLAETEDEIADAKAKASGSGGGGDS--Q 137

Query: 183 KPVEASLETTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGKRVVASPYAKKLAKELSVD 362
            P  A++E                              +GGKR+VASPYAKKLAKEL V+
Sbjct: 138 APPTAAIEAPVAVEKKIAAAPVAVKAVAASAVHPAS--EGGKRIVASPYAKKLAKELKVE 195

Query: 363 LSLVVGSGPLGRIVAKDVEXXXXXXXXXXXXXXXXXXXXXNVELGSVVPFTTMQGAVSRN 542
           L+ +VGSGP+GRIVAKDVE                     +VELGSVVPFTTMQGAVSRN
Sbjct: 196 LAGLVGSGPMGRIVAKDVEAVAAGGGVQAAVAVKEVVAAPSVELGSVVPFTTMQGAVSRN 255

Query: 543 MVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXXXXXXVKHPVVNSSCRDG 722
           MVESL+VPTFRVGYTITTDALD+LYKKIKSKGVTM+            KHPVVNSSCRDG
Sbjct: 256 MVESLTVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDG 315

Query: 723 SSFTYNSS 746
           +SF YNSS
Sbjct: 316 NSFVYNSS 323


>gb|AAF79262.1|AC023279_11 F12K21.24 [Arabidopsis thaliana]
          Length = 467

 Score =  263 bits (673), Expect = 2e-68
 Identities = 147/248 (59%), Positives = 163/248 (65%)
 Frame = +3

Query: 3   KADMDVETFYDGYLAAIMVDEGGIAAVGSAIAYLAETEDEIDAARSKAALAGGGAFSKEE 182
           KADMDVETFYDGYLAAIMV+EGG+A VGSAIA LAETEDEI  A++KA+  GGG  SK  
Sbjct: 80  KADMDVETFYDGYLAAIMVEEGGVAPVGSAIALLAETEDEIADAKAKASGGGGGGDSKAP 139

Query: 183 KPVEASLETTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGKRVVASPYAKKLAKELSVD 362
                +                                +GGKR+VASPYAKKLAKEL V+
Sbjct: 140 PASPPTAAVEAPVSVEKKVAAAPVSIKAVAASAVHPASEGGKRIVASPYAKKLAKELKVE 199

Query: 363 LSLVVGSGPLGRIVAKDVEXXXXXXXXXXXXXXXXXXXXXNVELGSVVPFTTMQGAVSRN 542
           L+ +VGSGP+GRIVAKDVE                      VELGSVVPFTTMQGAVSRN
Sbjct: 200 LAGLVGSGPMGRIVAKDVEAVAAGGGVQAAVAVKEVVAAPGVELGSVVPFTTMQGAVSRN 259

Query: 543 MVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXXXXXXVKHPVVNSSCRDG 722
           MVESL VPTFRVGYTI+TDALD+LYKKIKSKGVTM+            KHPVVNSSCRDG
Sbjct: 260 MVESLGVPTFRVGYTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDG 319

Query: 723 SSFTYNSS 746
           +SF YNSS
Sbjct: 320 NSFVYNSS 327


>ref|NP_174703.1| pyruvate dehydrogenase E2 component [Arabidopsis thaliana]
           gi|12323852|gb|AAG51893.1|AC023913_1 dihydrolipoamide
           S-acetyltransferase, putative; 19109-21166 [Arabidopsis
           thaliana] gi|22135832|gb|AAM91102.1| At1g34430/F7P12_2
           [Arabidopsis thaliana] gi|24111345|gb|AAN46796.1|
           At1g34430/F7P12_2 [Arabidopsis thaliana]
           gi|332193592|gb|AEE31713.1| pyruvate dehydrogenase E2
           component [Arabidopsis thaliana]
          Length = 465

 Score =  263 bits (673), Expect = 2e-68
 Identities = 147/248 (59%), Positives = 163/248 (65%)
 Frame = +3

Query: 3   KADMDVETFYDGYLAAIMVDEGGIAAVGSAIAYLAETEDEIDAARSKAALAGGGAFSKEE 182
           KADMDVETFYDGYLAAIMV+EGG+A VGSAIA LAETEDEI  A++KA+  GGG  SK  
Sbjct: 80  KADMDVETFYDGYLAAIMVEEGGVAPVGSAIALLAETEDEIADAKAKASGGGGGGDSKAP 139

Query: 183 KPVEASLETTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGKRVVASPYAKKLAKELSVD 362
                +                                +GGKR+VASPYAKKLAKEL V+
Sbjct: 140 PASPPTAAVEAPVSVEKKVAAAPVSIKAVAASAVHPASEGGKRIVASPYAKKLAKELKVE 199

Query: 363 LSLVVGSGPLGRIVAKDVEXXXXXXXXXXXXXXXXXXXXXNVELGSVVPFTTMQGAVSRN 542
           L+ +VGSGP+GRIVAKDVE                      VELGSVVPFTTMQGAVSRN
Sbjct: 200 LAGLVGSGPMGRIVAKDVEAVAAGGGVQAAVAVKEVVAAPGVELGSVVPFTTMQGAVSRN 259

Query: 543 MVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXXXXXXVKHPVVNSSCRDG 722
           MVESL VPTFRVGYTI+TDALD+LYKKIKSKGVTM+            KHPVVNSSCRDG
Sbjct: 260 MVESLGVPTFRVGYTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDG 319

Query: 723 SSFTYNSS 746
           +SF YNSS
Sbjct: 320 NSFVYNSS 327


>gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
           thaliana]
          Length = 464

 Score =  262 bits (669), Expect = 6e-68
 Identities = 149/249 (59%), Positives = 166/249 (66%), Gaps = 1/249 (0%)
 Frame = +3

Query: 3   KADMDVETFYDGYLAAIMVDEGGIAAVGSAIAYLAETEDEIDAARSKAALAGGGAFSKEE 182
           KADMDVETFYDGYLAAIMV+EGG+A VGSAIA LAETEDEI  A++KA  +GGG  SK  
Sbjct: 80  KADMDVETFYDGYLAAIMVEEGGVAPVGSAIALLAETEDEIADAKAKA--SGGGGDSKAP 137

Query: 183 KPVEASLET-TTXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGKRVVASPYAKKLAKELSV 359
            P      T                              +GGKR+VASPYAKKLAKEL+V
Sbjct: 138 PPASPPTATVVAPVAVEKKIAAPPVAIKAVAASAVHPASEGGKRIVASPYAKKLAKELNV 197

Query: 360 DLSLVVGSGPLGRIVAKDVEXXXXXXXXXXXXXXXXXXXXXNVELGSVVPFTTMQGAVSR 539
           +L+ +VGSGP+GRIVAKDVE                      VELGSVVPFTTMQGAVSR
Sbjct: 198 ELAGLVGSGPMGRIVAKDVEAVAAGGGVQAAVAVKEVVAVPGVELGSVVPFTTMQGAVSR 257

Query: 540 NMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXXXXXXVKHPVVNSSCRD 719
           NMVESL+VPTFRVGYTI+TDALD+LYKKIKSKGVTM+            KHPVVNSSCRD
Sbjct: 258 NMVESLAVPTFRVGYTISTDALDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRD 317

Query: 720 GSSFTYNSS 746
           G+SF YNSS
Sbjct: 318 GNSFVYNSS 326


>ref|XP_002271286.1| PREDICTED: dihydrolipoyllysine-residue acetyltransferase component
           of pyruvate dehydrogenase complex, mitochondrial-like
           isoform 1 [Vitis vinifera]
          Length = 477

 Score =  258 bits (660), Expect = 7e-67
 Identities = 149/256 (58%), Positives = 164/256 (64%), Gaps = 8/256 (3%)
 Frame = +3

Query: 3   KADMDVETFYDGYLAAIMVDEGGIAAVGSAIAYLAETEDEIDAARSKAALAGGGAFSKEE 182
           KADMDVETFYDGYLAAIMV+EGG+AAVGSAIA LAETEDEI  ARSKA  +   +     
Sbjct: 84  KADMDVETFYDGYLAAIMVEEGGVAAVGSAIALLAETEDEIAEARSKANTSPSSSPPSPA 143

Query: 183 KPVEASLETTTXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGKRVVASPYAKKLAKELSVD 362
               A  E+                             +GGKR+VASPYAKKLAKEL+VD
Sbjct: 144 AAAAAPEESVGAPEKAAPVKAAATVTVAKMASSVHPASEGGKRIVASPYAKKLAKELNVD 203

Query: 363 LSLVVGSGPLGRIVAKDVEXXXXXXXXXXXXXXXXXXXXX--------NVELGSVVPFTT 518
           L  VVGSGP+GRIVAKDVE                              +ELG+VVPFTT
Sbjct: 204 LGNVVGSGPMGRIVAKDVEAAAAAGVSVAAEDPKPSPSSAPVKAPASTGIELGTVVPFTT 263

Query: 519 MQGAVSRNMVESLSVPTFRVGYTITTDALDSLYKKIKSKGVTMSXXXXXXXXXXXVKHPV 698
           MQGAVSRNMV+SL+VPTFRVGYTITTDALD+LYKKIKSKGVTM+           VKHPV
Sbjct: 264 MQGAVSRNMVDSLTVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPV 323

Query: 699 VNSSCRDGSSFTYNSS 746
           VNSSCRDG SFTYNSS
Sbjct: 324 VNSSCRDGKSFTYNSS 339


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