BLASTX nr result

ID: Coptis25_contig00007398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00007398
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280724.1| PREDICTED: uncharacterized protein LOC100255...    57   1e-06
ref|NP_180658.3| protein kinase domain-containing protein [Arabi...    57   2e-06
ref|XP_002528550.1| protein kinase, putative [Ricinus communis] ...    56   3e-06
ref|XP_002321072.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002879296.1| kinase family protein [Arabidopsis lyrata su...    55   5e-06

>ref|XP_002280724.1| PREDICTED: uncharacterized protein LOC100255804 [Vitis vinifera]
           gi|302143427|emb|CBI21988.3| unnamed protein product
           [Vitis vinifera]
          Length = 817

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +3

Query: 81  LSHSEPNIANTFWRRSRRKVIAEQQTASS 167
           LSHSEPNIA TFWRRSRRKVIAEQ+TASS
Sbjct: 343 LSHSEPNIATTFWRRSRRKVIAEQRTASS 371


>ref|NP_180658.3| protein kinase domain-containing protein [Arabidopsis thaliana]
           gi|334184603|ref|NP_001189646.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
           gi|330253382|gb|AEC08476.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
           gi|330253383|gb|AEC08477.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
          Length = 775

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +3

Query: 9   YP--SGTATAMLINSFHTNSGAELAGLSHSEPNIANTFWRRSRRKVIAEQQTASS 167
           YP  SG++   L+    T    +L+  SHSEPN+A  FWRRSRRKVIAEQ+TASS
Sbjct: 306 YPNASGSSLRSLMLRPSTAIERKLSNTSHSEPNVATVFWRRSRRKVIAEQRTASS 360


>ref|XP_002528550.1| protein kinase, putative [Ricinus communis]
           gi|223532052|gb|EEF33862.1| protein kinase, putative
           [Ricinus communis]
          Length = 810

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 81  LSHSEPNIANTFWRRSRRKVIAEQQTASS 167
           LSHSEPNIA TFWRRSR+KVIAEQ+TASS
Sbjct: 342 LSHSEPNIATTFWRRSRKKVIAEQRTASS 370


>ref|XP_002321072.1| predicted protein [Populus trichocarpa] gi|222861845|gb|EEE99387.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 81  LSHSEPNIANTFWRRSRRKVIAEQQTASS 167
           LSHSEPNIA TFWRRSR+KVIAEQ+TASS
Sbjct: 343 LSHSEPNIATTFWRRSRKKVIAEQRTASS 371


>ref|XP_002879296.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325135|gb|EFH55555.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 764

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +3

Query: 69  ELAGLSHSEPNIANTFWRRSRRKVIAEQQTASS 167
           +L+  SHSEPN+A  FWRRSRRKVIAEQ+TASS
Sbjct: 318 KLSNTSHSEPNVATVFWRRSRRKVIAEQRTASS 350


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